Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 1.5e-169 599.7 376 100.0
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.4e-90 337.4 353 56.7
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.3e-90 335.5 352 55.7
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 1.2e-89 334.3 352 54.5
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 1.2e-89 334.3 361 65.4
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.0e-89 333.6 352 55.4
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 4.5e-89 332.4 363 56.2
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 2.9e-88 329.7 352 58.0
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 8.4e-88 328.2 355 54.9
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 2.7e-86 323.2 363 53.4
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 1.0e-85 321.2 356 55.9
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.0e-85 321.2 372 51.9
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.3e-85 320.9 353 56.1
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.1e-84 317.8 390 59.0
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 1.1e-84 317.8 370 52.2
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 2.5e-84 316.6 353 53.0
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 5.7e-84 315.5 356 55.1
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 1.6e-83 313.9 351 57.3
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 2.1e-83 313.5 358 53.6
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 2.1e-83 313.5 368 59.2
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 4.8e-83 312.4 370 51.6
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 1.1e-82 311.2 353 54.4
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 1.8e-82 310.5 370 54.6
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 2.4e-82 310.1 370 51.1
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 2.6e-81 306.6 308 64.6
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 5.9e-81 305.4 348 54.0
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 5.9e-81 305.4 355 54.6
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 7.6e-81 305.1 348 53.7
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 1.0e-80 304.7 369 53.1
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 2.2e-80 303.5 393 49.9
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 2.9e-80 303.1 350 52.9
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 5.0e-80 302.4 380 51.3
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 8.4e-80 301.6 330 53.6
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 1.1e-79 301.2 355 54.1
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 1.9e-79 300.4 349 53.3
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 3.2e-79 299.7 355 51.5
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 4.2e-79 299.3 349 53.3
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 4.2e-79 299.3 349 53.3
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.2e-79 299.3 332 51.8
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 4.2e-79 299.3 361 52.9
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 4.2e-79 299.3 345 55.1
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.2e-79 298.5 355 51.3
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 9.3e-79 298.1 348 53.2
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 1.6e-78 297.4 352 54.5
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.6e-78 297.4 372 56.2
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 3.5e-78 296.2 358 54.2
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 1.0e-77 294.7 350 51.7
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 1.8e-77 293.9 374 51.9
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 1.5e-76 290.8 353 60.3
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 3.3e-76 289.7 350 53.1
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 4.3e-76 289.3 344 51.7
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 9.7e-76 288.1 367 57.5
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 1.3e-75 287.7 343 56.9
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 2.2e-75 287.0 350 50.6
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 6.3e-75 285.4 309 57.6
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 6.3e-75 285.4 361 52.6
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 8.2e-75 285.0 353 55.8
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 1.1e-74 284.6 372 50.5
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 3.1e-74 283.1 310 57.4
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 3.1e-74 283.1 340 51.5
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 9.0e-74 281.6 343 57.7
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.2e-73 281.2 346 56.1
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 2.0e-73 280.4 354 54.8
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 3.8e-72 276.2 367 50.4
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 8.5e-72 275.0 337 54.3
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 2.5e-71 273.5 330 53.0
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 2.5e-71 273.5 346 51.7
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 4.2e-71 272.7 377 50.1
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 7.2e-71 271.9 389 47.6
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 1.6e-70 270.8 351 55.3
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 6.1e-70 268.9 371 52.6
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 7.9e-70 268.5 362 48.9
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 8.8e-69 265.0 365 46.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 8.8e-69 265.0 384 53.1
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 1.5e-68 264.2 359 50.1
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 1.3e-67 261.2 387 45.2
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 1.7e-67 260.8 344 50.6
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 2.6e-65 253.4 352 56.5
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 4.5e-65 252.7 278 52.5
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 6.5e-64 248.8 399 45.6
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 1.4e-63 247.7 310 53.2
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 3.6e-62 243.0 353 47.0
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 1.0e-61 241.5 341 48.7
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 1.8e-61 240.7 341 48.1
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 1.7e-59 234.2 396 47.0
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 1.0e-56 224.9 350 44.6
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 1.7e-56 224.2 344 44.8
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 6.1e-54 215.7 354 44.1
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 1.6e-49 201.1 354 46.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 8.5e-48 195.3 280 55.4
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 3.6e-46 189.9 356 42.1
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 6.8e-45 185.7 274 45.6
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 1.2e-44 184.9 372 39.5
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 3.4e-44 183.3 365 39.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 1.1e-42 178.3 303 42.6
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 4.1e-42 176.4 258 51.2
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 7.0e-42 175.6 288 50.0
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 1.6e-41 174.5 165 55.2
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 2.8e-35 153.7 169 48.5
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 6.3e-35 152.5 287 46.0
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 2.4e-34 150.6 342 43.9
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 5.0e-32 142.9 299 36.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 1.8e-29 134.4 337 38.6
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 2.2e-27 127.5 85 78.8
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 2.3e-21 107.5 70 84.3
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 3.1e-21 107.1 329 31.3
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 8.9e-21 105.5 211 62.1
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 1.7e-19 101.3 62 85.5
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 1.1e-15 88.6 159 39.6
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 9.5e-15 85.5 126 38.9
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.1e-14 84.3 318 34.6
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 8.9e-13 79.0 182 35.7
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 4.1e-10 70.1 306 29.4
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.0e-08 65.5 47 59.6
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 4.3e-07 60.1 139 36.7
Cfa024449 Carpinus fangiana HOM05D006889 ORTHO05D008614 4.7e-06 56.6 36 63.9


User provided reference genes

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