Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g084100 Amaranthus hybridus HOM05D005733 ORTHO05D007442 1.4e-130 469.5 229 100.0
EL10Ac8g18867 Beta vulgaris HOM05D005733 ORTHO05D007442 2.4e-37 159.8 180 51.7
Sed0012123 Sechium edule HOM05D005733 ORTHO05D007442 2.3e-35 153.3 181 48.1
Sc08g0005630 Simmondsia chinensis HOM05D005733 ORTHO05D007442 1.9e-34 150.2 181 49.2
Cpa.g.sc75.16 Carica papaya HOM05D005733 ORTHO05D007442 3.3e-34 149.4 181 47.0
TWI63G0727 Tripterygium wilfordii HOM05D005733 ORTHO05D007442 3.3e-34 149.4 181 47.0
ClCG02G004040 Citrullus lanatus HOM05D005733 ORTHO05D007442 5.6e-34 148.7 181 46.4
MELO3C013348.2 Cucumis melo HOM05D005733 ORTHO05D007442 5.6e-34 148.7 181 45.9
CiPaw.07G186800 Carya illinoinensis HOM05D005733 ORTHO05D007442 7.3e-34 148.3 181 46.4
CANSAT11G0464 Cannabis sativa HOM05D005733 ORTHO05D007442 1.2e-33 147.5 181 47.0
QL02p095666 Quercus lobata HOM05D005733 ORTHO05D007442 2.1e-33 146.7 181 46.4
Atru.chr7.506 Acer truncatum HOM05D005733 ORTHO05D007442 8.0e-33 144.8 182 46.2
CsaV3_7G001070 Cucumis sativus L. HOM05D005733 ORTHO05D007442 8.0e-33 144.8 181 45.3
MD16G1262600 Malus domestica HOM05D005733 ORTHO05D007442 8.0e-33 144.8 181 45.3
Cfa013546 Carpinus fangiana HOM05D005733 ORTHO05D007442 1.1e-32 144.4 181 45.3
Prupe.1G097300 Prunus persica HOM05D005733 ORTHO05D007442 1.1e-32 144.4 181 45.9
Hund08988 Selenicereus undatus HOM05D005733 ORTHO05D007442 1.1e-32 144.4 181 48.1
TAR383G0601 Trochodendron aralioides HOM05D005733 ORTHO05D007442 1.1e-32 144.4 181 45.9
Rhsim01G0012100 Rhododendron simsii HOM05D005733 ORTHO05D007442 1.8e-32 143.7 181 44.8
Haze_22166 Corylus avellana HOM05D005733 ORTHO05D007442 2.3e-32 143.3 181 44.8
GSVIVG01023749001 Vitis vinifera HOM05D005733 ORTHO05D007442 2.3e-32 143.3 191 45.5
Hma1.2p1_1531F.1_g289230 Hydrangea macrophylla HOM05D005733 ORTHO05D007442 3.1e-32 142.9 174 47.1
RcHm_v2.0_Chr4g0404931 Rosa chinensis HOM05D005733 ORTHO05D007442 3.1e-32 142.9 181 45.9
Actinidia20956 Actinidia chinensis HOM05D005733 ORTHO05D007442 4.0e-32 142.5 181 45.9
Duzib187G0641 Durio zibethinus HOM05D005733 ORTHO05D007442 5.2e-32 142.1 181 45.9
Lj9A728T23 Lonicera japonica HOM05D005733 ORTHO05D007442 5.2e-32 142.1 181 44.8
MSTRG.19675 Avicennia marina HOM05D005733 ORTHO05D007442 6.8e-32 141.7 181 45.3
MBI14_g08080_MAGBIO Magnolia biondii HOM05D005733 ORTHO05D007442 6.8e-32 141.7 181 45.9
Ciclev10010607m.g Citrus clementina HOM05D005733 ORTHO05D007442 2.0e-31 140.2 181 44.8
DCAR_014719 Daucus carota HOM05D005733 ORTHO05D007442 2.0e-31 140.2 174 45.4
CSS0014936 Camellia sinensis var. sinensis HOM05D005733 ORTHO05D007442 2.6e-31 139.8 181 44.2
vmacro13073 Vaccinium macrocarpon HOM05D005733 ORTHO05D007442 4.4e-31 139.0 181 43.1
Cc06_g14000 Coffea canephora HOM05D005733 ORTHO05D007442 9.8e-31 137.9 181 43.6
COL.COLO4_27474 Corchorus olitorius HOM05D005733 ORTHO05D007442 9.8e-31 137.9 181 45.3
CAN.G1870.3 Capsicum annuum HOM05D005733 ORTHO05D007442 2.2e-30 136.7 181 44.8
FAN17G0482 Fragaria x ananassa HOM05D005733 ORTHO05D007442 2.2e-30 136.7 181 44.8
Gorai.004G103800 Gossypium raimondii HOM05D005733 ORTHO05D007442 2.2e-30 136.7 181 44.2
Oeu058827.1 Olea europaea HOM05D005733 ORTHO05D007442 2.9e-30 136.3 181 44.2
Thecc.09G161700 Theobroma cacao HOM05D005733 ORTHO05D007442 2.9e-30 136.3 181 43.6
Aa31LG7G2230 Aethionema arabicum HOM05D005733 ORTHO05D007442 6.4e-30 135.2 181 44.8
Aa31sc193G30 Aethionema arabicum HOM05D005733 ORTHO05D007442 1.1e-29 134.4 181 44.8
Migut.J01418 Erythranthe guttata HOM05D005733 ORTHO05D007442 1.1e-29 134.4 181 43.6
SalBow6G0174 Salvia bowleyana HOM05D005733 ORTHO05D007442 1.1e-29 134.4 181 43.1
Peaxi162Scf00525g00817 Petunia axillaris HOM05D005733 ORTHO05D007442 1.4e-29 134.0 181 43.6
THA.LOC104811821 Tarenaya hassleriana HOM05D005733 ORTHO05D007442 1.9e-29 133.7 181 43.1
Glyma.13G091800 Glycine max HOM05D005733 ORTHO05D007442 2.4e-29 133.3 181 43.6
PGR142G3644 Punica granatum HOM05D005733 ORTHO05D007442 2.4e-29 133.3 181 43.6
Eucgr.C01245 Eucalyptus grandis HOM05D005733 ORTHO05D007442 3.2e-29 132.9 181 43.6
Medtr4g129490 Medicago truncatula HOM05D005733 ORTHO05D007442 3.2e-29 132.9 174 44.8
Potri.006G176500 Populus trichocarpa HOM05D005733 ORTHO05D007442 3.2e-29 132.9 181 42.5
Solyc07g006340.3 Solanum lycopersicum HOM05D005733 ORTHO05D007442 3.2e-29 132.9 181 43.1
Sopen07g002430 Solanum pennellii HOM05D005733 ORTHO05D007442 3.2e-29 132.9 181 43.1
Aqoxy7G03235 Aquilegia oxysepala HOM05D005733 ORTHO05D007442 4.1e-29 132.5 181 42.0
Sabra06G0134700 Salix brachista HOM05D005733 ORTHO05D007442 4.1e-29 132.5 181 41.4
PSO063G5638 Papaver somniferum HOM05D005733 ORTHO05D007442 5.4e-29 132.1 174 44.3
CDE02G3066 Ceratophyllum demersum HOM05D005733 ORTHO05D007442 7.1e-29 131.7 180 42.8
FvH4_4g23510 Fragaria vesca HOM05D005733 ORTHO05D007442 7.1e-29 131.7 174 44.8
Glyma.17G068500 Glycine max HOM05D005733 ORTHO05D007442 7.1e-29 131.7 181 43.1
Manes.06G030000 Manihot esculenta HOM05D005733 ORTHO05D007442 7.1e-29 131.7 174 43.7
FAN12G3847 Fragaria x ananassa HOM05D005733 ORTHO05D007442 9.2e-29 131.3 174 44.3
Nitab4.5_0005985g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 9.2e-29 131.3 181 42.5
ATR0580G232 Amborella trichopoda HOM05D005733 ORTHO05D007442 1.2e-28 131.0 181 43.1
PSO782G5004 Papaver somniferum HOM05D005733 ORTHO05D007442 1.2e-28 131.0 174 43.7
Ca_21184_v3 Cicer arietinum L. HOM05D005733 ORTHO05D007442 1.6e-28 130.6 181 42.5
PGSC0003DMG402011224 Solanum tuberosum HOM05D005733 ORTHO05D007442 1.6e-28 130.6 181 42.5
AT4G28030 Arabidopsis thaliana HOM05D005733 ORTHO05D007442 2.1e-28 130.2 181 43.1
CARHR235730 Cardamine hirsuta HOM05D005733 ORTHO05D007442 2.1e-28 130.2 181 43.1
Lj4g0011389 Lotus japonicus HOM05D005733 ORTHO05D007442 2.1e-28 130.2 181 44.2
SGA_v2.0_scaffold66G22515 Striga asiatica HOM05D005733 ORTHO05D007442 2.1e-28 130.2 181 41.4
Carub.0007s1276 Capsella rubella HOM05D005733 ORTHO05D007442 2.7e-28 129.8 181 41.4
HanXRQChr10g0284091 Helianthus annuus HOM05D005733 ORTHO05D007442 2.7e-28 129.8 181 42.5
arahy.Tifrunner.gnm1.ann1.0JVE27 Arachis hypogaea HOM05D005733 ORTHO05D007442 3.5e-28 129.4 181 43.6
arahy.Tifrunner.gnm1.ann1.GE8FUD Arachis hypogaea HOM05D005733 ORTHO05D007442 3.5e-28 129.4 181 43.6
Psat4g010480 Pisum sativum HOM05D005733 ORTHO05D007442 3.5e-28 129.4 174 43.7
Psat4g048120 Pisum sativum HOM05D005733 ORTHO05D007442 3.5e-28 129.4 174 43.7
VMungo1215G3105 Vigna mungo HOM05D005733 ORTHO05D007442 3.5e-28 129.4 181 42.5
AL7G24580 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 4.6e-28 129.0 181 42.5
TPR.G5298 Trifolium pratense HOM05D005733 ORTHO05D007442 1.3e-27 127.5 181 42.0
Thhalv10025984m.g Eutrema salsugineum HOM05D005733 ORTHO05D007442 1.7e-27 127.1 181 42.0
Phvul.003G151100 Phaseolus vulgaris HOM05D005733 ORTHO05D007442 2.3e-27 126.7 181 41.4
Gohir.D08G097100 Gossypium hirsutum HOM05D005733 ORTHO05D007442 3.0e-27 126.3 87 71.3
A03p57670 Brassica napus HOM05D005733 ORTHO05D007442 3.9e-27 125.9 181 41.4
BraA03t14833Z Brassica rapa HOM05D005733 ORTHO05D007442 3.9e-27 125.9 181 41.4
Sp7g25980 Schrenkiella parvula HOM05D005733 ORTHO05D007442 3.9e-27 125.9 181 42.0
Lsat_1_v5_gn_8_64360 Lactuca sativa HOM05D005733 ORTHO05D007442 8.6e-27 124.8 181 39.8
Nn4g23704 Nelumbo nucifera HOM05D005733 ORTHO05D007442 1.1e-26 124.4 88 65.9
C07p55880 Brassica napus HOM05D005733 ORTHO05D007442 3.3e-26 122.9 181 41.4
BcaC06g32650 Brassica carinata HOM05D005733 ORTHO05D007442 4.3e-26 122.5 181 40.9
Lalb_Chr13g0300531 Lupinus albus HOM05D005733 ORTHO05D007442 9.5e-26 121.3 181 40.9
Psat4g048000 Pisum sativum HOM05D005733 ORTHO05D007442 9.5e-26 121.3 127 53.5
ECA236G1842 Erigeron canadensis HOM05D005733 ORTHO05D007442 2.8e-25 119.8 183 38.8
FAN05G3225 Fragaria x ananassa HOM05D005733 ORTHO05D007442 2.8e-25 119.8 181 41.4
FAN05G4341 Fragaria x ananassa HOM05D005733 ORTHO05D007442 2.8e-25 119.8 181 41.4
HPP92_025686 Vanilla planifolia HOM05D005733 ORTHO05D007442 3.6e-25 119.4 89 64.0
AUR62039751 Chenopodium quinoa HOM05D005733 ORTHO05D007442 3.4e-23 112.8 139 46.8
AUR62028411 Chenopodium quinoa HOM05D005733 ORTHO05D007442 4.4e-23 112.5 139 46.8
AL7G30680 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 8.3e-22 108.2 202 36.6
AL6G37990 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 1.1e-21 107.8 202 36.6
AL1G31260 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 1.4e-21 107.5 202 36.6
AL3G40460 Arabidopsis lyrata HOM05D005733 ORTHO05D007442 1.4e-21 107.5 202 36.6
Zm00001eb412590 Zea mays HOM05D005733 ORTHO05D007442 4.1e-21 105.9 181 37.0
unitig_0.g187 Utricularia gibba HOM05D005733 ORTHO05D007442 5.4e-21 105.5 187 35.8
C01p24460 Brassica napus HOM05D005733 ORTHO05D007442 6.0e-20 102.1 83 61.4
SEGI_16930 Sequoiadendron giganteum HOM05D005733 ORTHO05D007442 9.6e-18 94.7 99 47.5
Cc00_g30300 Coffea canephora HOM05D005733 ORTHO05D007442 8.9e-16 88.2 137 38.0
Mapoly0019s0038 Marchantia polymorpha HOM05D005733 ORTHO05D007442 2.2e-14 83.6 91 50.5
CDE05G3532 Ceratophyllum demersum HOM05D001854 ORTHO05D001800 9.3e-13 78.2 128 35.2
AagrBONN_evm.TU.Sc2ySwM_344.3527 Anthoceros agrestis HOM05D005733 ORTHO05D007442 1.2e-12 77.8 181 30.9
Gohir.A08G096462 Gossypium hirsutum HOM05D005733 ORTHO05D007442 1.2e-12 77.8 158 34.8
Pp3c1_4600 Physcomitrium patens HOM05D005733 ORTHO05D007442 4.6e-12 75.9 92 42.4
Pp3c11_5280 Physcomitrium patens HOM05D005733 ORTHO05D007442 3.9e-11 72.8 168 32.1
BcaC09g50518 Brassica carinata HOM05D005733 ORTHO05D007442 1.5e-10 70.9 184 31.5
Nitab4.5_0005551g0010 Nicotiana tabacum HOM05D005733 ORTHO05D007442 5.6e-10 68.9 120 35.8
arahy.Tifrunner.gnm1.ann1.65BVJ7 Arachis hypogaea HOM05D005733 ORTHO05D007442 1.6e-09 67.4 130 34.6
C02p34360 Brassica napus HOM05D005733 ORTHO05D007442 1.8e-08 63.9 47 61.7
BolC2t09466H Brassica oleracea HOM05D005733 ORTHO05D007442 1.8e-08 63.9 47 61.7
arahy.Tifrunner.gnm1.ann1.IUS3AS Arachis hypogaea HOM05D005733 ORTHO05D007442 3.1e-08 63.2 137 29.2
MCO03G095 Micromonas commoda HOM05D005733 ORTHO05D007442 3.1e-08 63.2 79 43.0
arahy.Tifrunner.gnm1.ann1.RS9BE1 Arachis hypogaea HOM05D004903 ORTHO05D005849 3.4e-07 59.7 45 55.6
BolC7t46066H Brassica oleracea HOM05D007179 ORTHO05D009124 9.9e-07 58.2 33 75.8
arahy.Tifrunner.gnm1.ann1.00M671 Arachis hypogaea HOM05D005733 ORTHO05D007442 2.2e-06 57.0 37 64.9
AagrBONN_evm.TU.Sc2ySwM_117.2238 Anthoceros agrestis HOM05D004023 ORTHO05D004681 3.8e-06 56.2 68 41.2


User provided reference genes

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