Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g083710 Amaranthus hybridus HOM05D007139 ORTHO05D009171 1.8e-89 332.8 195 100.0
AUR62033234 Chenopodium quinoa HOM05D007139 ORTHO05D009171 8.0e-66 254.2 187 69.0
AUR62021317 Chenopodium quinoa HOM05D007139 ORTHO05D009171 2.0e-64 249.6 187 66.8
Ah.09g230020 Amaranthus hybridus HOM05D000263 ORTHO05D000213 2.9e-63 245.7 187 65.2
EL10Ac8g18300 Beta vulgaris HOM05D007139 ORTHO05D009171 2.4e-54 216.1 186 60.8
Hund09038 Selenicereus undatus HOM05D007139 ORTHO05D009171 1.2e-48 197.2 179 61.5
Potri.006G165800 Populus trichocarpa HOM05D007139 ORTHO05D009171 3.4e-48 195.7 186 61.8
FvH4_4g07780 Fragaria vesca HOM05D007139 ORTHO05D009171 1.0e-44 184.1 188 55.9
FAN12G3123 Fragaria x ananassa HOM05D007139 ORTHO05D009171 1.0e-44 184.1 188 55.9
Sabra06G0127600 Salix brachista HOM05D007139 ORTHO05D009171 5.1e-44 181.8 195 55.9
Nn8g40530 Nelumbo nucifera HOM05D007139 ORTHO05D009171 1.9e-43 179.9 186 57.0
THA.LOC104813514 Tarenaya hassleriana HOM05D007139 ORTHO05D009171 3.6e-42 175.6 192 54.7
RcHm_v2.0_Chr4g0400871 Rosa chinensis HOM05D007139 ORTHO05D009171 4.7e-42 175.3 192 53.6
MSTRG.6235 Avicennia marina HOM05D007139 ORTHO05D009171 1.4e-41 173.7 182 60.4
CANSAT11G2567 Cannabis sativa HOM05D007139 ORTHO05D009171 4.0e-41 172.2 187 63.1
FAN22G0146 Fragaria x ananassa HOM05D007139 ORTHO05D009171 4.0e-41 172.2 191 52.4
CiPaw.07G194300 Carya illinoinensis HOM05D007139 ORTHO05D009171 3.4e-40 169.1 188 51.6
CAN.G32.11 Capsicum annuum HOM05D007139 ORTHO05D009171 7.6e-40 167.9 178 54.5
COL.COLO4_06001 Corchorus olitorius HOM05D007139 ORTHO05D009171 1.7e-39 166.8 186 58.6
MELO3C004003.2 Cucumis melo HOM05D007139 ORTHO05D009171 1.4e-38 163.7 155 52.9
Nitab4.5_0000055g0210 Nicotiana tabacum HOM05D007139 ORTHO05D009171 2.4e-38 162.9 184 54.3
CDE07G0879 Ceratophyllum demersum HOM05D007139 ORTHO05D009171 3.2e-38 162.5 187 51.3
Hund09039 Selenicereus undatus HOM05D007139 ORTHO05D009171 5.4e-38 161.8 186 52.7
ATR0580G128 Amborella trichopoda HOM05D007139 ORTHO05D009171 1.2e-37 160.6 185 50.3
Cc06_g13070 Coffea canephora HOM05D007139 ORTHO05D009171 1.2e-37 160.6 183 50.8
Actinidia02506 Actinidia chinensis HOM05D007139 ORTHO05D009171 1.6e-37 160.2 182 51.6
Psat0s3717g0080 Pisum sativum HOM05D007139 ORTHO05D009171 2.1e-37 159.8 193 50.3
Thecc.09G178100 Theobroma cacao HOM05D007139 ORTHO05D009171 3.5e-37 159.1 182 57.1
TWI63G0338 Tripterygium wilfordii HOM05D007139 ORTHO05D009171 7.8e-37 157.9 186 49.5
Duzib168G1431 Durio zibethinus HOM05D007139 ORTHO05D009171 2.3e-36 156.4 184 56.0
Nitab4.5_0013636g0010 Nicotiana tabacum HOM05D007139 ORTHO05D009171 1.9e-35 153.3 184 52.7
Peaxi162Scf01054g00025 Petunia axillaris HOM05D007139 ORTHO05D009171 1.6e-34 150.2 185 53.0
Ciclev10009657m.g Citrus clementina HOM05D007139 ORTHO05D009171 2.8e-34 149.4 182 52.7
HPP92_017140 Vanilla planifolia HOM05D007139 ORTHO05D009171 6.2e-34 148.3 129 58.9
Lju50A10T16 Lonicera japonica HOM05D007139 ORTHO05D009171 4.0e-33 145.6 123 63.4
Manes.14G157565 Manihot esculenta HOM05D007139 ORTHO05D009171 1.5e-32 143.7 187 52.9
FAN17G0841 Fragaria x ananassa HOM05D007139 ORTHO05D009171 4.4e-32 142.1 188 48.4
ClCG11G011980 Citrullus lanatus HOM05D007139 ORTHO05D009171 1.3e-31 140.6 191 44.5
A02p08570 Brassica napus HOM05D007139 ORTHO05D009171 8.4e-31 137.9 188 48.9
BraA02t05926Z Brassica rapa HOM05D007139 ORTHO05D009171 8.4e-31 137.9 188 48.9
Migut.J01499 Erythranthe guttata HOM05D007139 ORTHO05D009171 1.1e-30 137.5 193 47.2
CiPaw.08G034800 Carya illinoinensis HOM05D007139 ORTHO05D009171 4.2e-30 135.6 187 46.0
GSVIVG01029235001 Vitis vinifera HOM05D007139 ORTHO05D009171 4.2e-30 135.6 182 46.7
Ca_21240_v3 Cicer arietinum L. HOM05D007139 ORTHO05D009171 9.3e-30 134.4 126 61.1
Carub.0008s1786 Capsella rubella HOM05D007139 ORTHO05D009171 1.6e-29 133.7 196 45.9
Zm00001eb226320 Zea mays HOM05D007139 ORTHO05D009171 1.6e-29 133.7 180 50.6
Atru.chr7.836 Acer truncatum HOM05D007139 ORTHO05D009171 2.1e-29 133.3 142 55.6
FAN07G2196 Fragaria x ananassa HOM05D007139 ORTHO05D009171 2.1e-29 133.3 188 45.7
SEGI_32174 Sequoiadendron giganteum HOM05D007139 ORTHO05D009171 2.1e-29 133.3 152 48.0
Gohir.A08G019100 Gossypium hirsutum HOM05D007139 ORTHO05D009171 1.3e-28 130.6 186 44.1
arahy.Tifrunner.gnm1.ann1.832R2S Arachis hypogaea HOM05D007139 ORTHO05D009171 6.6e-28 128.3 198 51.5
Medtr4g127690 Medicago truncatula HOM05D007139 ORTHO05D009171 3.3e-27 125.9 151 49.7
QL11p005114 Quercus lobata HOM05D007139 ORTHO05D009171 7.3e-27 124.8 185 41.6
TPR.G5382 Trifolium pratense HOM05D007139 ORTHO05D009171 2.1e-26 123.2 126 60.3
Gohir.D08G029700 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.8e-26 122.9 186 42.5
Gorai.004G027200 Gossypium raimondii HOM05D007139 ORTHO05D009171 2.8e-26 122.9 186 42.5
Glyma.13G098100 Glycine max HOM05D007139 ORTHO05D009171 8.1e-26 121.3 188 43.1
PSO170G0255 Papaver somniferum HOM05D007139 ORTHO05D009171 1.4e-25 120.6 189 49.2
PSO063G4029 Papaver somniferum HOM05D007139 ORTHO05D009171 9.0e-25 117.9 188 49.5
Rhsim01G0002000 Rhododendron simsii HOM05D007139 ORTHO05D009171 9.0e-25 117.9 185 43.8
A10p14810 Brassica napus HOM05D007139 ORTHO05D009171 1.2e-24 117.5 125 59.2
ECA234G0508 Erigeron canadensis HOM05D007139 ORTHO05D009171 2.6e-24 116.3 195 45.1
Cfa013405 Carpinus fangiana HOM05D007139 ORTHO05D009171 3.4e-24 115.9 126 54.0
MD13G1247100 Malus domestica HOM05D007139 ORTHO05D009171 3.4e-24 115.9 181 43.1
PGR044G0070 Punica granatum HOM05D007139 ORTHO05D009171 7.6e-24 114.8 191 41.9
arahy.Tifrunner.gnm1.ann1.N1BBZF Arachis hypogaea HOM05D007139 ORTHO05D009171 1.7e-23 113.6 177 50.3
Cpa.g.c34934.2 Carica papaya HOM05D007139 ORTHO05D009171 2.2e-23 113.2 185 41.6
Duzib150G0167 Durio zibethinus HOM05D007139 ORTHO05D009171 3.8e-23 112.5 187 50.8
HanXRQChr12g0384691 Helianthus annuus HOM05D007139 ORTHO05D009171 8.4e-23 111.3 195 47.7
Dinv19561 Davidia involucrata HOM05D007139 ORTHO05D009171 1.9e-22 110.2 134 53.7
Thhalv10014766m.g Eutrema salsugineum HOM05D007139 ORTHO05D009171 1.9e-22 110.2 196 41.3
TAR383G0430 Trochodendron aralioides HOM05D007139 ORTHO05D009171 2.4e-22 109.8 181 43.1
Eucgr.C02387 Eucalyptus grandis HOM05D007139 ORTHO05D009171 3.2e-22 109.4 132 50.8
Lsat_1_v5_gn_5_85520 Lactuca sativa HOM05D007139 ORTHO05D009171 3.2e-22 109.4 196 44.4
Sc18g0007530 Simmondsia chinensis HOM05D007139 ORTHO05D009171 2.7e-21 106.3 166 48.2
Sopen07g006630 Solanum pennellii HOM05D007139 ORTHO05D009171 2.7e-21 106.3 181 41.4
Hma1.2p1_1086F.1_g255460 Hydrangea macrophylla HOM05D007139 ORTHO05D009171 4.6e-21 105.5 186 40.9
MBI14_g08139_MAGBIO Magnolia biondii HOM05D007139 ORTHO05D009171 6.0e-21 105.1 187 40.6
Gohir.D05G004250 Gossypium hirsutum HOM05D007139 ORTHO05D009171 7.9e-21 104.8 172 41.9
Aqoxy7G02982 Aquilegia oxysepala HOM05D007139 ORTHO05D009171 1.0e-20 104.4 186 41.4
AL8G33320 Arabidopsis lyrata HOM05D007139 ORTHO05D009171 5.1e-20 102.1 133 51.1
SGA_v2.0_scaffold66G22428 Striga asiatica HOM05D007139 ORTHO05D009171 6.7e-20 101.7 191 38.2
AT5G57345 Arabidopsis thaliana HOM05D007139 ORTHO05D009171 8.7e-20 101.3 133 51.9
Gorai.009G004000 Gossypium raimondii HOM05D007139 ORTHO05D009171 8.7e-20 101.3 172 41.3
CARHR271140 Cardamine hirsuta HOM05D007139 ORTHO05D009171 1.5e-19 100.5 132 51.5
Lj4g0008370 Lotus japonicus HOM05D007139 ORTHO05D009171 3.3e-19 99.4 175 44.6
Lalb_Chr12g0199481 Lupinus albus HOM05D007139 ORTHO05D009171 5.6e-19 98.6 156 43.6
Phvul.003G143600 Phaseolus vulgaris HOM05D007139 ORTHO05D009171 5.6e-19 98.6 193 37.8
VMungo1215G0446 Vigna mungo HOM05D007139 ORTHO05D009171 5.6e-19 98.6 144 44.4
Oeu025690.1 Olea europaea HOM05D007139 ORTHO05D009171 9.6e-19 97.8 183 39.3
BcaB05g22339 Brassica carinata HOM05D007139 ORTHO05D009171 1.3e-18 97.4 111 55.9
Aa31LG3G13220 Aethionema arabicum HOM05D007139 ORTHO05D009171 1.6e-18 97.1 131 49.6
Glyma.17G061600 Glycine max HOM05D007139 ORTHO05D009171 6.9e-17 91.7 186 38.2
BcaC03g14161 Brassica carinata HOM05D007139 ORTHO05D009171 2.6e-16 89.7 97 56.7
vmacro13142 Vaccinium macrocarpon HOM05D007139 ORTHO05D009171 2.6e-16 89.7 187 42.2
Haze_21948 Corylus avellana HOM05D007139 ORTHO05D009171 1.3e-15 87.4 84 61.9
Sed0022431 Sechium edule HOM05D007139 ORTHO05D009171 2.2e-15 86.7 154 40.3
BraA10t43560Z Brassica rapa HOM05D007139 ORTHO05D009171 3.8e-15 85.9 53 79.2
Os06g0694800 Oryza sativa ssp. japonica HOM05D007139 ORTHO05D009171 9.3e-14 81.3 167 40.7
DCAR_020130 Daucus carota HOM05D007139 ORTHO05D009171 2.3e-12 76.6 137 38.0
CsaV3_2G008540 Cucumis sativus L. HOM05D007139 ORTHO05D009171 3.9e-12 75.9 139 39.6
Lsat_1_v5_gn_1_19521 Lactuca sativa HOM05D007139 ORTHO05D009171 1.6e-10 70.5 127 36.2
Gohir.A05G003850 Gossypium hirsutum HOM05D007139 ORTHO05D009171 2.4e-09 66.6 86 51.2


User provided reference genes

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