Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g082180 Amaranthus hybridus HOM05D005593 ORTHO05D006515 0.0e+00 1583.5 827 100.0
EL10Ac8g18455 Beta vulgaris HOM05D005593 ORTHO05D006515 1.0e-226 790.8 882 56.7
Ah.09g231030 Amaranthus hybridus HOM05D005593 ORTHO05D006515 1.2e-208 730.7 854 53.4
AUR62010967 Chenopodium quinoa HOM05D005593 ORTHO05D006515 1.6e-203 713.8 896 54.1
AUR62021477 Chenopodium quinoa HOM05D005593 ORTHO05D006515 3.1e-191 672.9 896 51.7
Hund09560 Selenicereus undatus HOM05D005593 ORTHO05D006515 5.0e-117 426.4 910 38.7
Sc08g0007580 Simmondsia chinensis HOM05D005593 ORTHO05D006515 2.0e-105 387.9 870 36.7
Hund09124 Selenicereus undatus HOM05D005593 ORTHO05D006515 2.8e-104 384.0 914 37.4
Dinv41619 Davidia involucrata HOM05D005593 ORTHO05D006515 4.1e-79 300.4 919 32.4
Dinv36648 Davidia involucrata HOM05D005593 ORTHO05D006515 8.6e-77 292.7 923 30.7
TAR383G0262 Trochodendron aralioides HOM05D005593 ORTHO05D006515 2.1e-70 271.6 955 30.2
Manes.16G114300 Manihot esculenta HOM05D005593 ORTHO05D006515 2.4e-66 258.1 906 29.5
CiPaw.04G162900 Carya illinoinensis HOM05D005593 ORTHO05D006515 3.1e-66 257.7 879 29.8
FAN23G2457 Fragaria x ananassa HOM05D005593 ORTHO05D006515 9.0e-66 256.1 876 29.5
RcHm_v2.0_Chr2g0090061 Rosa chinensis HOM05D005593 ORTHO05D006515 1.2e-65 255.8 885 29.6
Thecc.09G108000 Theobroma cacao HOM05D005593 ORTHO05D006515 1.2e-65 255.8 894 29.3
Prupe.7G233100 Prunus persica HOM05D005593 ORTHO05D006515 2.2e-64 251.5 875 29.6
Duzib187G0236 Durio zibethinus HOM05D005593 ORTHO05D006515 5.4e-63 246.9 918 29.7
FAN26G1119 Fragaria x ananassa HOM05D005593 ORTHO05D006515 4.6e-62 243.8 882 28.9
FAN19G1075 Fragaria x ananassa HOM05D005593 ORTHO05D006515 6.0e-62 243.4 870 28.6
Cfa003241 Carpinus fangiana HOM05D005593 ORTHO05D006515 1.3e-61 242.3 869 29.3
Ciclev10007444m.g Citrus clementina HOM05D005593 ORTHO05D006515 1.9e-60 238.4 919 28.4
CANSAT56G2752 Cannabis sativa HOM05D005593 ORTHO05D006515 4.3e-60 237.3 922 29.4
Glyma.09G192000 Glycine max HOM05D005593 ORTHO05D006515 4.3e-60 237.3 884 28.7
Oeu064588.2 Olea europaea HOM05D005593 ORTHO05D006515 7.3e-60 236.5 901 27.7
Glyma.07G084900 Glycine max HOM05D005593 ORTHO05D006515 1.3e-59 235.7 888 30.1
Cpa.g.sc23.90 Carica papaya HOM05D005593 ORTHO05D006515 1.6e-59 235.3 938 27.9
Peaxi162Scf00231g00216 Petunia axillaris HOM05D005593 ORTHO05D006515 4.8e-59 233.8 935 29.0
Peaxi162Scf01363g00023 Petunia axillaris HOM05D005593 ORTHO05D006515 1.4e-58 232.3 936 29.1
FAN28G0021 Fragaria x ananassa HOM05D005593 ORTHO05D006515 3.1e-58 231.1 878 28.9
TWI63G0748 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 5.3e-58 230.3 912 28.5
Psat1g043640 Pisum sativum HOM05D005593 ORTHO05D006515 9.0e-58 229.6 865 29.7
arahy.Tifrunner.gnm1.ann1.F0KYD5 Arachis hypogaea HOM05D005593 ORTHO05D006515 7.6e-57 226.5 864 30.4
CSS0003686 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 7.6e-57 226.5 1029 26.4
Medtr6g087760 Medicago truncatula HOM05D005593 ORTHO05D006515 9.9e-57 226.1 870 29.8
Duzib150G1551 Durio zibethinus HOM05D005593 ORTHO05D006515 1.3e-56 225.7 925 27.7
Gohir.A06G063700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 1.1e-55 222.6 919 28.1
Lalb_Chr22g0352731 Lupinus albus HOM05D005593 ORTHO05D006515 4.2e-55 220.7 886 29.8
Gorai.010G072700 Gossypium raimondii HOM05D005593 ORTHO05D006515 5.4e-55 220.3 896 27.5
Aqoxy7G01612 Aquilegia oxysepala HOM05D005593 ORTHO05D006515 7.1e-55 219.9 904 27.9
Gohir.D06G062400 Gossypium hirsutum HOM05D005593 ORTHO05D006515 2.3e-53 214.9 904 27.2
Phvul.004G165100 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 2.3e-53 214.9 884 28.5
Peaxi162Scf00207g01317 Petunia axillaris HOM05D005593 ORTHO05D006515 1.1e-52 212.6 899 27.7
Potri.018G082300 Populus trichocarpa HOM05D005593 ORTHO05D006515 1.1e-52 212.6 921 27.8
Haze_25764 Corylus avellana HOM05D005593 ORTHO05D006515 1.5e-52 212.2 912 28.3
Lj2g0010013 Lotus japonicus HOM05D005593 ORTHO05D006515 1.5e-52 212.2 876 29.2
VMungo0464G1894 Vigna mungo HOM05D005593 ORTHO05D006515 1.9e-52 211.8 896 27.6
MSTRG.19579 Avicennia marina HOM05D005593 ORTHO05D006515 4.3e-52 210.7 893 27.4
PGR142G3553 Punica granatum HOM05D005593 ORTHO05D006515 9.6e-52 209.5 864 28.6
CiPaw.03G229900 Carya illinoinensis HOM05D005593 ORTHO05D006515 1.6e-51 208.8 839 28.6
MD15G1182400 Malus domestica HOM05D005593 ORTHO05D006515 2.1e-51 208.4 872 28.0
Lalb_Chr14g0371581 Lupinus albus HOM05D005593 ORTHO05D006515 3.7e-51 207.6 907 28.3
vmacro20713 Vaccinium macrocarpon HOM05D005593 ORTHO05D006515 4.8e-51 207.2 1055 26.7
TPR.G10037 Trifolium pratense HOM05D005593 ORTHO05D006515 8.1e-51 206.5 859 27.8
Ca_25537_v3 Cicer arietinum L. HOM05D005593 ORTHO05D006515 1.1e-50 206.1 851 29.0
SalBow6G5362 Salvia bowleyana HOM05D005593 ORTHO05D006515 1.1e-50 206.1 839 27.3
Nn2g11698 Nelumbo nucifera HOM05D005593 ORTHO05D006515 4.0e-50 204.1 937 28.5
Sabra18G0070100 Salix brachista HOM05D005593 ORTHO05D006515 4.0e-50 204.1 889 28.3
Gohir.D07G006300 Gossypium hirsutum HOM05D005593 ORTHO05D006515 5.3e-50 203.8 845 29.1
QL02p043456 Quercus lobata HOM05D005593 ORTHO05D006515 5.3e-50 203.8 852 28.3
Gorai.001G005900 Gossypium raimondii HOM05D005593 ORTHO05D006515 6.9e-50 203.4 845 29.1
Manes.03G022200 Manihot esculenta HOM05D005593 ORTHO05D006515 4.5e-49 200.7 902 27.8
PSO832G1383 Papaver somniferum HOM05D005593 ORTHO05D006515 4.5e-49 200.7 973 26.2
Cc06_g09850 Coffea canephora HOM05D005593 ORTHO05D006515 1.7e-48 198.7 912 26.2
Nitab4.5_0000097g0120 Nicotiana tabacum HOM05D005593 ORTHO05D006515 1.7e-48 198.7 973 26.6
QL02p044157 Quercus lobata HOM05D005593 ORTHO05D006515 1.7e-48 198.7 878 27.0
Nitab4.5_0013892g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 2.9e-48 198.0 970 27.0
PSO782G3244 Papaver somniferum HOM05D005593 ORTHO05D006515 6.4e-48 196.8 979 26.8
DCAR_012067 Daucus carota HOM05D005593 ORTHO05D006515 1.1e-47 196.1 919 28.7
PGSC0003DMG400015636 Solanum tuberosum HOM05D005593 ORTHO05D006515 1.4e-47 195.7 964 27.2
Nitab4.5_0009314g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 1.9e-47 195.3 882 27.2
Rhsim01G0100000 Rhododendron simsii HOM05D005593 ORTHO05D006515 7.1e-47 193.4 1073 26.7
Nn3g18070 Nelumbo nucifera HOM05D005593 ORTHO05D006515 2.7e-46 191.4 919 26.6
TWI34G0806 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 1.0e-45 189.5 509 33.8
GSVIVG01015371001 Vitis vinifera HOM05D005593 ORTHO05D006515 1.8e-45 188.7 712 29.6
Sopen12g003130 Solanum pennellii HOM05D005593 ORTHO05D006515 3.3e-44 184.5 861 27.2
PGSC0003DMG400000308 Solanum tuberosum HOM05D005593 ORTHO05D006515 4.3e-44 184.1 863 27.6
Dinv11466 Davidia involucrata HOM05D005593 ORTHO05D006515 8.4e-40 169.9 316 40.2
Phvul.002G312500 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 1.9e-39 168.7 870 26.6
Sed0013092 Sechium edule HOM05D005593 ORTHO05D006515 2.5e-39 168.3 886 27.1
Solyc07g032710.4 Solanum lycopersicum HOM05D005593 ORTHO05D006515 1.6e-38 165.6 894 25.8
ECA234G4430 Erigeron canadensis HOM05D005593 ORTHO05D006515 1.3e-37 162.5 861 26.8
Nitab4.5_0002904g0040 Nicotiana tabacum HOM05D005593 ORTHO05D006515 1.3e-37 162.5 868 25.9
CSS0038657 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.8e-37 162.2 889 26.5
Lsat_1_v5_gn_5_103481 Lactuca sativa HOM05D005593 ORTHO05D006515 3.0e-37 161.4 849 24.9
Sopen07g016890 Solanum pennellii HOM05D005593 ORTHO05D006515 6.7e-37 160.2 894 25.5
ClCG06G008720 Citrullus lanatus HOM05D005593 ORTHO05D006515 3.3e-36 157.9 879 24.9
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 3.7e-35 154.5 841 26.6
MELO3C024628.2 Cucumis melo HOM05D005593 ORTHO05D006515 5.3e-34 150.6 866 26.0
VMungo0251G1265 Vigna mungo HOM05D005593 ORTHO05D006515 6.9e-34 150.2 865 25.1
Solyc12g007140.3 Solanum lycopersicum HOM05D005593 ORTHO05D006515 2.0e-33 148.7 749 26.0
A07p07590 Brassica napus HOM05D005593 ORTHO05D006515 9.4e-31 139.8 857 25.9
BraA07t28551Z Brassica rapa HOM05D005593 ORTHO05D006515 1.2e-30 139.4 857 25.9
THA.LOC104804597 Tarenaya hassleriana HOM05D005593 ORTHO05D006515 1.8e-29 135.6 854 24.8
BcaB06g26676 Brassica carinata HOM05D005593 ORTHO05D006515 1.1e-28 132.9 849 25.2
Actinidia20382 Actinidia chinensis HOM05D005593 ORTHO05D006515 1.5e-28 132.5 714 25.6
AL3G40252 Arabidopsis lyrata HOM05D005593 ORTHO05D006515 5.7e-28 130.6 859 25.1
Glyma.08G037800 Glycine max HOM05D005593 ORTHO05D006515 1.4e-26 125.9 884 24.1
Lj7E653T1 Lonicera japonica HOM05D005593 ORTHO05D006515 1.4e-26 125.9 157 48.4
DCAR_028703 Daucus carota HOM05D005593 ORTHO05D006515 9.1e-26 123.2 730 25.8
MBI04_g19171_MAGBIO Magnolia biondii HOM05D005593 ORTHO05D006515 9.1e-26 123.2 688 25.3
AT3G24630 Arabidopsis thaliana HOM05D005593 ORTHO05D006515 1.3e-24 119.4 850 24.5
BolC7t41613H Brassica oleracea HOM05D005593 ORTHO05D006515 1.3e-24 119.4 858 24.7
Aa31sc586G30 Aethionema arabicum HOM05D005593 ORTHO05D006515 1.7e-24 119.0 849 24.4
Carub.0003s2504 Capsella rubella HOM05D005593 ORTHO05D006515 3.8e-24 117.9 855 24.9
CsaV3_1G024390 Cucumis sativus L. HOM05D005593 ORTHO05D006515 6.5e-24 117.1 841 24.5
C07p11350 Brassica napus HOM05D005593 ORTHO05D006515 5.5e-23 114.0 858 23.9
BcaC06g35744 Brassica carinata HOM05D005593 ORTHO05D006515 7.2e-23 113.6 859 24.9
Rhsim01G0098000 Rhododendron simsii HOM05D005593 ORTHO05D006515 2.7e-22 111.7 156 48.7
CARHR100960 Cardamine hirsuta HOM05D005593 ORTHO05D006515 6.1e-22 110.5 870 24.0
Thhalv10002425m.g Eutrema salsugineum HOM05D005593 ORTHO05D006515 7.9e-22 110.2 837 22.6
ClCG11G002410 Citrullus lanatus HOM05D005593 ORTHO05D006515 3.9e-21 107.8 604 25.5
CsaV3_2G002210 Cucumis sativus L. HOM05D005593 ORTHO05D006515 3.9e-21 107.8 604 26.7
Sp3g22410 Schrenkiella parvula HOM05D005593 ORTHO05D006515 3.9e-21 107.8 842 24.0
BolC7t41614H Brassica oleracea HOM05D005593 ORTHO05D006515 8.8e-21 106.7 302 33.8
Gohir.A07G005700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 4.4e-20 104.4 585 25.1
Glyma.05G230300 Glycine max HOM05D005593 ORTHO05D006515 5.7e-20 104.0 849 23.3
MELO3C004562.2 Cucumis melo HOM05D005593 ORTHO05D006515 1.3e-19 102.8 611 26.8
Rhsim01G0099500 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.3e-19 102.8 206 33.0
Eucgr.C01030 Eucalyptus grandis HOM05D005593 ORTHO05D006515 8.5e-16 90.1 171 30.4
Sed0018005 Sechium edule HOM05D005593 ORTHO05D006515 1.9e-15 89.0 659 25.8
TWI34G0072 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 3.2e-15 88.2 163 31.3
Rhsim01G0099800 Rhododendron simsii HOM05D005593 ORTHO05D006515 5.5e-15 87.4 373 29.2
COL.COLO4_34842 Corchorus olitorius HOM05D005593 ORTHO05D006515 1.2e-14 86.3 616 24.0
arahy.Tifrunner.gnm1.ann1.31F9U3 Arachis hypogaea HOM05D005593 ORTHO05D006515 2.3e-13 82.0 443 26.4
CSS0008305 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 6.7e-13 80.5 229 27.9
TAR381G0400 Trochodendron aralioides HOM05D006788 ORTHO05D008265 6.7e-13 80.5 263 29.7
ATR0315G161 Amborella trichopoda HOM05D005593 ORTHO05D006515 1.1e-12 79.7 258 28.7
Sed0026051 Sechium edule HOM05D005593 ORTHO05D006515 5.7e-12 77.4 521 25.0
Lsat_1_v5_gn_5_29160 Lactuca sativa HOM05D006788 ORTHO05D008265 4.8e-11 74.3 792 22.3
Gorai.009G202800 Gossypium raimondii HOM05D006788 ORTHO05D008265 9.1e-10 70.1 197 32.5
Atru.chr13.488 Acer truncatum HOM05D006788 ORTHO05D008265 1.2e-09 69.7 201 32.3
Dinv36075 Davidia involucrata HOM05D006788 ORTHO05D008265 2.0e-09 68.9 970 21.5
HPP92_023915 Vanilla planifolia HOM05D005593 ORTHO05D006515 2.0e-09 68.9 303 27.7
QL02p008476 Quercus lobata HOM05D006788 ORTHO05D008265 1.0e-08 66.6 236 30.9
Rhsim06G0034200 Rhododendron simsii HOM05D006788 ORTHO05D008265 2.9e-08 65.1 192 32.8
Haze_17976 Corylus avellana HOM05D006788 ORTHO05D008265 5.0e-08 64.3 190 34.2
FvH4_2g39870 Fragaria vesca HOM05D006788 ORTHO05D008265 5.0e-08 64.3 835 22.6
Migut.N00496 Erythranthe guttata HOM05D006788 ORTHO05D008265 8.5e-08 63.5 812 23.2
Prupe.1G380200 Prunus persica HOM05D006788 ORTHO05D008265 8.5e-08 63.5 866 21.2
RcHm_v2.0_Chr5g0052261 Rosa chinensis HOM05D006788 ORTHO05D008265 8.5e-08 63.5 868 22.1
Zm00001eb339200 Zea mays HOM05D042755 ORTHO05D006515 1.1e-07 63.2 754 21.9
Hma1.2p1_0203F.1_g086400 Hydrangea macrophylla HOM05D006788 ORTHO05D008265 1.5e-07 62.8 241 31.1
TWI56G0676 Tripterygium wilfordii HOM05D006788 ORTHO05D008265 1.5e-07 62.8 565 25.5
Actinidia15324 Actinidia chinensis HOM05D006788 ORTHO05D008265 1.9e-07 62.4 442 27.4
Nitab4.5_0000110g0630 Nicotiana tabacum HOM05D006788 ORTHO05D008265 2.5e-07 62.0 873 23.5
Potri.002G261700 Populus trichocarpa HOM05D006788 ORTHO05D008265 2.5e-07 62.0 255 30.6
vmacro21636 Vaccinium macrocarpon HOM05D006788 ORTHO05D008265 2.5e-07 62.0 192 32.8
Sabra14G0142000 Salix brachista HOM05D006788 ORTHO05D008265 9.4e-07 60.1 197 31.0
Nn5g29585 Nelumbo nucifera HOM05D006788 ORTHO05D008265 1.6e-06 59.3 624 22.6
FAN20G0511 Fragaria x ananassa HOM05D006788 ORTHO05D008265 2.1e-06 58.9 809 21.0
FAN27G2706 Fragaria x ananassa HOM05D006788 ORTHO05D008265 4.7e-06 57.8 831 21.9
CiPaw.15G077700 Carya illinoinensis HOM05D006788 ORTHO05D008265 6.1e-06 57.4 199 31.2
Nitab4.5_0009150g0020 Nicotiana tabacum HOM05D006788 ORTHO05D008265 6.1e-06 57.4 920 21.3
Manes.18G027700 Manihot esculenta HOM05D006788 ORTHO05D008265 8.0e-06 57.0 236 28.0


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