Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.5e-144 516.2 259 100.0
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 4.8e-135 484.6 243 99.6
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.1e-126 456.8 243 95.9
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.1e-85 319.7 161 100.0
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 3.5e-85 318.9 206 80.1
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 6.0e-85 318.2 203 80.8
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 5.1e-84 315.1 202 80.2
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 8.7e-84 314.3 199 79.4
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 1.1e-83 313.9 203 78.3
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.9e-83 313.2 203 78.3
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 4.3e-83 312.0 206 76.7
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.3e-83 311.2 199 80.4
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 1.3e-82 310.5 198 79.8
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 2.1e-82 309.7 199 78.9
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 2.8e-82 309.3 203 76.8
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 2.8e-82 309.3 196 80.1
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 4.8e-82 308.5 199 78.4
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.1e-82 307.8 212 76.4
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 8.1e-82 307.8 203 76.8
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 8.1e-82 307.8 203 76.4
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.4e-81 307.0 204 76.0
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 1.4e-81 307.0 202 77.2
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 1.8e-81 306.6 203 75.9
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 2.4e-81 306.2 201 79.1
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 3.1e-81 305.8 202 78.7
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 3.1e-81 305.8 200 78.0
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 4.0e-81 305.4 200 78.5
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 6.9e-81 304.7 204 77.5
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.2e-80 303.9 198 76.8
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.2e-80 303.9 202 77.2
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 1.5e-80 303.5 198 76.3
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 1.5e-80 303.5 204 77.0
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 2.0e-80 303.1 202 76.7
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 2.0e-80 303.1 202 77.7
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 2.0e-80 303.1 201 78.6
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 2.6e-80 302.8 199 77.9
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 2.6e-80 302.8 202 77.2
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 2.6e-80 302.8 205 76.6
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 2.6e-80 302.8 194 78.9
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 3.4e-80 302.4 202 76.7
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 3.4e-80 302.4 202 76.7
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 4.5e-80 302.0 203 76.8
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 4.5e-80 302.0 201 76.6
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 5.8e-80 301.6 202 75.7
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 1.3e-79 300.4 202 75.7
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-79 300.4 203 75.4
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 1.7e-79 300.1 201 76.1
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 2.2e-79 299.7 203 77.8
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 2.2e-79 299.7 201 77.6
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 8.4e-79 297.7 198 75.8
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 8.4e-79 297.7 203 74.9
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 1.1e-78 297.4 201 75.6
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 1.1e-78 297.4 205 76.1
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 1.1e-78 297.4 203 74.4
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 2.4e-78 296.2 203 76.4
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 2.4e-78 296.2 199 75.9
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 2.4e-78 296.2 202 75.7
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 3.2e-78 295.8 202 76.7
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 3.2e-78 295.8 203 74.9
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 5.4e-78 295.0 203 74.4
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 5.4e-78 295.0 202 76.2
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 5.4e-78 295.0 196 78.6
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 5.4e-78 295.0 203 74.4
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 7.1e-78 294.7 201 74.1
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 1.2e-77 293.9 193 78.8
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 1.6e-77 293.5 202 76.2
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 2.7e-77 292.7 202 75.7
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 3.5e-77 292.4 199 75.9
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 3.5e-77 292.4 204 74.0
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 4.6e-77 292.0 203 73.9
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 4.6e-77 292.0 203 71.9
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 4.6e-77 292.0 203 72.9
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 6.0e-77 291.6 203 72.9
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 7.9e-77 291.2 203 73.9
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 1.8e-76 290.0 203 75.4
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 1.8e-76 290.0 203 75.4
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.3e-76 289.7 202 75.2
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 2.3e-76 289.7 202 74.8
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 3.0e-76 289.3 202 74.8
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 3.0e-76 289.3 202 74.8
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 1.1e-75 287.3 194 77.3
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 4.3e-75 285.4 199 73.4
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 9.6e-75 284.3 203 72.9
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 4.8e-74 282.0 192 74.0
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 8.1e-74 281.2 194 75.3
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 1.1e-73 280.8 199 71.9
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.8e-73 280.0 203 72.4
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 6.9e-73 278.1 258 61.6
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 3.4e-72 275.8 173 80.9
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 1.9e-70 270.0 203 69.0
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 3.0e-68 262.7 199 66.8
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 1.9e-67 260.0 292 53.4
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 3.3e-67 259.2 197 65.5
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 2.8e-66 256.1 202 66.8
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.1e-65 254.2 193 67.9
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 4.5e-64 248.8 347 46.1
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 2.2e-63 246.5 170 76.5
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 2.9e-63 246.1 195 65.1
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 7.1e-62 241.5 138 86.2
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 6.3e-58 228.4 199 61.8
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 6.3e-58 228.4 199 61.3
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.4e-57 226.5 243 52.7
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 4.5e-56 222.2 150 76.0
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 2.5e-54 216.5 152 74.3
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 1.5e-51 207.2 201 55.2
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 3.3e-51 206.1 191 58.1
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 4.1e-41 172.6 142 66.9
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 5.0e-39 165.6 199 45.2
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 3.7e-34 149.4 83 88.0
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 3.7e-34 149.4 83 88.0
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 1.6e-32 144.1 188 44.1
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 7.5e-27 125.2 77 81.8
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.1e-25 121.3 100 61.0
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 4.1e-17 92.8 84 63.1
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 7.7e-16 88.6 48 81.2
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.0e-15 88.2 168 33.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 6.6e-15 85.5 51 78.4
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 2.5e-14 83.6 50 78.0
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 5.5e-14 82.4 48 79.2
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.6e-11 73.6 47 76.6


User provided reference genes

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