Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.14g078680 Amaranthus hybridus HOM05D006568 ORTHO05D008342 1.3e-274 949.1 479 100.0
AUR62041444 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.7e-184 649.0 484 71.7
AUR62011262 Chenopodium quinoa HOM05D006568 ORTHO05D008342 2.0e-182 642.9 475 72.0
EL10Ac8g18826 Beta vulgaris HOM05D006568 ORTHO05D008342 3.5e-171 605.5 492 67.9
Hund21609 Selenicereus undatus HOM05D006568 ORTHO05D008342 1.0e-167 594.0 503 65.0
Duzib150G1168 Durio zibethinus HOM05D006568 ORTHO05D008342 1.4e-151 540.4 517 59.0
QL02p091184 Quercus lobata HOM05D006568 ORTHO05D008342 6.8e-151 538.1 514 60.1
Thecc.09G141200 Theobroma cacao HOM05D006568 ORTHO05D008342 1.2e-150 537.3 509 59.7
COL.COLO4_24111 Corchorus olitorius HOM05D006568 ORTHO05D008342 1.5e-150 537.0 498 60.0
TWI63G0031 Tripterygium wilfordii HOM05D006568 ORTHO05D008342 2.0e-150 536.6 501 59.9
Potri.018G114600 Populus trichocarpa HOM05D006568 ORTHO05D008342 5.8e-150 535.0 501 60.5
Atru.chr7.233 Acer truncatum HOM05D006568 ORTHO05D008342 7.6e-150 534.6 498 58.8
Eucgr.C00440 Eucalyptus grandis HOM05D006568 ORTHO05D008342 2.9e-149 532.7 489 59.9
Sabra18G0097500 Salix brachista HOM05D006568 ORTHO05D008342 5.4e-148 528.5 515 58.1
CSS0018949 Camellia sinensis var. sinensis HOM05D006568 ORTHO05D008342 3.5e-147 525.8 506 59.1
Haze_19324 Corylus avellana HOM05D006568 ORTHO05D008342 1.3e-146 523.9 489 60.7
CANSAT11G1359 Cannabis sativa HOM05D006568 ORTHO05D008342 2.3e-146 523.1 506 58.5
Rhsim03G0254700 Rhododendron simsii HOM05D006568 ORTHO05D008342 3.0e-146 522.7 499 59.1
Ciclev10007895m.g Citrus clementina HOM05D006568 ORTHO05D008342 3.9e-146 522.3 497 58.4
Cfa020897 Carpinus fangiana HOM05D006568 ORTHO05D008342 1.6e-144 516.9 502 59.0
RcHm_v2.0_Chr2g0086721 Rosa chinensis HOM05D006568 ORTHO05D008342 1.4e-143 513.8 494 58.5
Gohir.A06G050300 Gossypium hirsutum HOM05D006568 ORTHO05D008342 6.8e-143 511.5 502 57.8
Gohir.D06G049600 Gossypium hirsutum HOM05D006568 ORTHO05D008342 8.9e-143 511.1 497 58.1
Manes.14G138200 Manihot esculenta HOM05D006568 ORTHO05D008342 8.9e-143 511.1 491 59.5
Gorai.010G056500 Gossypium raimondii HOM05D006568 ORTHO05D008342 1.5e-142 510.4 497 57.9
Prupe.7G255100 Prunus persica HOM05D006568 ORTHO05D008342 2.0e-142 510.0 502 57.6
Duzib168G0355 Durio zibethinus HOM05D006568 ORTHO05D008342 9.9e-142 507.7 508 56.9
FvH4_1g01760 Fragaria vesca HOM05D006568 ORTHO05D008342 1.3e-141 507.3 491 58.2
FAN28G1334 Fragaria x ananassa HOM05D006568 ORTHO05D008342 6.4e-141 505.0 491 57.8
FAN19G0856 Fragaria x ananassa HOM05D006568 ORTHO05D008342 1.4e-140 503.8 492 57.9
FAN26G2488 Fragaria x ananassa HOM05D006568 ORTHO05D008342 2.4e-140 503.1 492 57.5
Glyma.17G105400 Glycine max HOM05D006568 ORTHO05D008342 2.4e-140 503.1 484 58.7
CiPaw.15G182900 Carya illinoinensis HOM05D006568 ORTHO05D008342 4.2e-140 502.3 501 57.1
GSVIVG01012889001 Vitis vinifera HOM05D006568 ORTHO05D008342 4.2e-140 502.3 486 59.5
Cc06_g07460 Coffea canephora HOM05D006568 ORTHO05D008342 1.6e-139 500.4 503 57.3
MD15G1160100 Malus domestica HOM05D006568 ORTHO05D008342 1.6e-139 500.4 503 56.3
MD02G1013300 Malus domestica HOM05D006568 ORTHO05D008342 6.0e-139 498.4 501 55.5
Potri.006G190400 Populus trichocarpa HOM05D006568 ORTHO05D008342 1.5e-137 493.8 501 57.5
Glyma.13G165600 Glycine max HOM05D006568 ORTHO05D008342 1.9e-137 493.4 485 57.9
PGR142G1115 Punica granatum HOM05D006568 ORTHO05D008342 5.6e-137 491.9 477 59.1
Oeu028734.1 Olea europaea HOM05D006568 ORTHO05D008342 7.3e-137 491.5 504 56.9
CsaV3_1G028460 Cucumis sativus L. HOM05D006568 ORTHO05D008342 9.6e-137 491.1 498 56.6
Phvul.003G174400 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 1.1e-135 487.6 490 57.3
VMungo1215G2753 Vigna mungo HOM05D006568 ORTHO05D008342 1.1e-135 487.6 488 56.6
Cpa.g.sc46.84 Carica papaya HOM05D006568 ORTHO05D008342 1.8e-135 486.9 494 56.9
Nitab4.5_0001021g0090 Nicotiana tabacum HOM05D006568 ORTHO05D008342 9.0e-135 484.6 506 55.1
MELO3C010267.2 Cucumis melo HOM05D006568 ORTHO05D008342 2.6e-134 483.0 499 56.1
Aqoxy7G03538 Aquilegia oxysepala HOM05D006568 ORTHO05D008342 4.4e-134 482.3 494 57.1
vmacro06105 Vaccinium macrocarpon HOM05D006568 ORTHO05D000801 1.3e-133 480.7 501 55.3
Medtr4g116470 Medicago truncatula HOM05D006568 ORTHO05D008342 4.9e-133 478.8 494 55.3
DCAR_008870 Daucus carota HOM05D006568 ORTHO05D008342 6.4e-133 478.4 491 56.4
Peaxi162Scf00391g00111 Petunia axillaris HOM05D006568 ORTHO05D008342 1.9e-132 476.9 510 55.1
TPR.G15810 Trifolium pratense HOM05D006568 ORTHO05D008342 7.1e-132 474.9 481 55.7
CAN.G518.23 Capsicum annuum HOM05D006568 ORTHO05D008342 9.3e-132 474.6 503 54.7
Ca_21616_v3 Cicer arietinum L. HOM05D006568 ORTHO05D008342 1.2e-131 474.2 472 57.0
Nitab4.5_0001555g0100 Nicotiana tabacum HOM05D006568 ORTHO05D008342 1.6e-131 473.8 471 56.9
ClCG06G011990 Citrullus lanatus HOM05D006568 ORTHO05D008342 2.1e-131 473.4 500 54.8
Lj4g0026005 Lotus japonicus HOM05D006568 ORTHO05D008342 1.7e-130 470.3 495 55.6
Lalb_Chr12g0198501 Lupinus albus HOM05D006568 ORTHO05D008342 2.1e-128 463.4 479 55.3
PGSC0003DMG400030734 Solanum tuberosum HOM05D006568 ORTHO05D008342 2.8e-128 463.0 500 54.0
Solyc07g007190.3 Solanum lycopersicum HOM05D006568 ORTHO05D008342 8.1e-128 461.5 498 53.8
Hma1.2p1_0182F.1_g080440 Hydrangea macrophylla HOM05D006568 ORTHO05D008342 1.8e-127 460.3 572 50.2
arahy.Tifrunner.gnm1.ann1.XD5HYR Arachis hypogaea HOM05D006568 ORTHO05D008342 6.9e-127 458.4 491 53.2
Sed0017332 Sechium edule HOM05D006568 ORTHO05D008342 9.9e-126 454.5 487 55.0
Sopen07g003240 Solanum pennellii HOM05D006568 ORTHO05D008342 4.9e-125 452.2 498 53.4
arahy.Tifrunner.gnm1.ann1.9W3K41 Arachis hypogaea HOM05D006568 ORTHO05D008342 4.6e-123 445.7 496 52.0
Nn2g12241 Nelumbo nucifera HOM05D006568 ORTHO05D008342 9.6e-121 438.0 505 52.3
Dinv42917 Davidia involucrata HOM05D006568 ORTHO05D008342 3.7e-120 436.0 509 52.3
Dinv43183 Davidia involucrata HOM05D006568 ORTHO05D008342 3.7e-120 436.0 509 52.3
FAN23G2119 Fragaria x ananassa HOM05D006568 ORTHO05D008342 4.0e-119 432.6 488 52.5
Lj3C820G3 Lonicera japonica HOM05D006568 ORTHO05D008342 3.2e-116 422.9 498 52.0
Lj3A817T81 Lonicera japonica HOM05D006568 ORTHO05D008342 1.8e-114 417.2 508 51.2
Sed0011467 Sechium edule HOM05D006568 ORTHO05D008342 6.3e-112 408.7 479 52.0
SalBow1G3333 Salvia bowleyana HOM05D006568 ORTHO05D008342 2.0e-110 403.7 483 50.1
Nn8g39711 Nelumbo nucifera HOM05D006568 ORTHO05D008342 4.5e-110 402.5 441 54.2
MSTRG.26320 Avicennia marina HOM05D006568 ORTHO05D008342 1.3e-109 401.0 505 48.7
Migut.K00383 Erythranthe guttata HOM05D006568 ORTHO05D008342 1.6e-107 394.0 518 47.1
Lalb_Chr11g0072971 Lupinus albus HOM05D006568 ORTHO05D008342 1.0e-106 391.3 472 49.4
HanXRQChr03g0063991 Helianthus annuus HOM05D006568 ORTHO05D008342 1.8e-106 390.6 479 48.9
ATR0629G030 Amborella trichopoda HOM05D006568 ORTHO05D008342 2.3e-106 390.2 503 48.9
Oeu040792.1 Olea europaea HOM05D006568 ORTHO05D008342 1.5e-105 387.5 420 56.7
ECA240G0509 Erigeron canadensis HOM05D006568 ORTHO05D008342 6.9e-103 378.6 481 47.4
MSTRG.6088 Avicennia marina HOM05D006568 ORTHO05D008342 1.2e-102 377.9 473 51.0
MBI15_g47023_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 2.2e-101 373.6 503 47.1
Dinv22137 Davidia involucrata HOM05D006568 ORTHO05D008342 8.8e-98 361.7 454 50.2
SHI03244 Sapria himalayana HOM05D006568 ORTHO05D008342 6.3e-96 355.5 487 44.4
Psat4g033400 Pisum sativum HOM05D006568 ORTHO05D008342 1.2e-91 341.3 405 52.3
Dinv41428 Davidia involucrata HOM05D006568 ORTHO05D008342 6.7e-90 335.5 347 58.8
Lj6g0005589 Lotus japonicus HOM05D006568 ORTHO05D008342 2.2e-88 330.5 470 46.8
Glyma.15G201700 Glycine max HOM05D006568 ORTHO05D008342 5.3e-87 325.9 490 44.1
HPP92_005342 Vanilla planifolia HOM05D006568 ORTHO05D008342 3.6e-83 313.2 483 41.2
Phvul.009G209900 Phaseolus vulgaris HOM05D006568 ORTHO05D008342 4.7e-83 312.8 484 42.1
Migut.J01268 Erythranthe guttata HOM05D006568 ORTHO05D008342 6.7e-82 308.9 487 43.3
Actinidia26349 Actinidia chinensis HOM05D006568 ORTHO05D008342 2.2e-80 303.9 329 56.2
SalBow1G7296 Salvia bowleyana HOM05D006568 ORTHO05D008342 1.1e-79 301.6 409 48.7
Lsat_1_v5_gn_7_47940 Lactuca sativa HOM05D006568 ORTHO05D008342 2.9e-77 293.5 452 42.9
SEGI_32321 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.6e-75 286.6 557 36.1
VMungo1309G2996 Vigna mungo HOM05D006568 ORTHO05D008342 1.4e-74 284.6 493 40.0
Zm00001eb320530 Zea mays HOM05D006568 ORTHO05D008342 1.4e-74 284.6 490 39.8
SEGI_41462 Sequoiadendron giganteum HOM05D006568 ORTHO05D008342 3.0e-74 283.5 541 36.8
Os09g0556800 Oryza sativa ssp. japonica HOM05D006568 ORTHO05D008342 2.2e-72 277.3 496 39.1
TAR636G2103 Trochodendron aralioides HOM05D006568 ORTHO05D008342 5.4e-71 272.7 279 57.0
MBI15_g45924_MAGBIO Magnolia biondii HOM05D006568 ORTHO05D008342 8.3e-64 248.8 294 52.4
SGA_v2.0_scaffold229G43344 Striga asiatica HOM05D006568 ORTHO05D008342 1.3e-61 241.5 444 39.4
AagrBONN_evm.TU.Sc2ySwM_228.5766 Anthoceros agrestis HOM05D006568 ORTHO05D008342 1.1e-60 238.4 539 35.4
Actinidia38697 Actinidia chinensis HOM05D006568 ORTHO05D008342 8.0e-59 232.3 221 61.1
Actinidia38696 Actinidia chinensis HOM05D006568 ORTHO05D008342 1.8e-55 221.1 207 56.5
Mapoly0083s0072 Marchantia polymorpha HOM05D006568 ORTHO05D008342 3.3e-52 210.3 611 30.3
PSO782G3486 Papaver somniferum HOM05D006568 ORTHO05D008342 5.6e-52 209.5 352 41.8
SMO172G0216 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 2.3e-42 177.6 532 28.2
Zm00001eb104550 Zea mays HOM05D006568 ORTHO05D008342 1.9e-36 157.9 375 33.3
unitig_27.g25107 Utricularia gibba HOM05D006568 ORTHO05D008342 3.6e-35 153.7 142 59.9
TAR636G1038 Trochodendron aralioides HOM05D006568 ORTHO05D008342 3.6e-27 127.1 79 70.9
SMO172G0023 Selaginella moellendorffii HOM05D006568 ORTHO05D008342 5.6e-12 76.6 306 30.1
Dinv22138 Davidia involucrata HOM05D006568 ORTHO05D008342 6.2e-11 73.2 53 67.9
Oeu060513.1 Olea europaea HOM05D006568 ORTHO05D008342 1.6e-06 58.5 53 49.1


User provided reference genes

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