Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 1.8e-248 862.1 411 100.0
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 1.7e-198 696.0 406 81.8
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 3.4e-183 645.2 407 75.9
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 2.7e-180 635.6 408 75.5
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 5.1e-179 631.3 406 74.6
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 8.7e-179 630.6 409 73.8
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 1.9e-178 629.4 406 73.2
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 3.6e-177 625.2 406 73.9
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 4.8e-177 624.8 406 72.4
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 6.2e-177 624.4 404 73.8
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 1.4e-176 623.2 406 73.4
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 1.4e-176 623.2 409 72.9
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 2.4e-176 622.5 415 71.6
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 3.1e-176 622.1 415 71.6
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 3.1e-176 622.1 409 73.3
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 5.3e-176 621.3 405 73.6
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 9.0e-176 620.5 406 73.6
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 1.2e-175 620.2 405 74.3
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 1.5e-175 619.8 408 73.5
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 2.0e-175 619.4 407 72.5
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 2.6e-175 619.0 409 73.3
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 3.4e-175 618.6 407 72.0
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 7.6e-175 617.5 399 74.4
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 1.3e-174 616.7 407 73.2
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.7e-174 616.3 408 72.3
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 2.2e-174 615.9 407 72.7
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 3.8e-174 615.1 407 72.5
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 8.4e-174 614.0 409 71.4
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 1.4e-173 613.2 409 71.9
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 5.4e-173 611.3 418 71.3
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.6e-172 609.8 407 71.0
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 6.0e-172 607.8 407 72.5
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 1.3e-171 606.7 409 72.1
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 1.8e-171 606.3 409 70.4
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 6.7e-171 604.4 406 71.9
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 6.7e-171 604.4 409 69.9
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 6.7e-171 604.4 411 72.3
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 1.1e-170 603.6 406 71.9
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 3.3e-170 602.1 406 71.9
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 5.6e-170 601.3 406 71.9
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 9.6e-170 600.5 406 71.9
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 2.1e-169 599.4 406 71.7
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 3.7e-169 598.6 409 70.9
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 4.8e-169 598.2 410 71.5
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 8.1e-169 597.4 407 71.5
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.4e-168 596.7 406 71.2
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.4e-168 596.7 406 71.2
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 1.8e-168 596.3 406 70.9
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 4.0e-168 595.1 406 70.7
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 2.0e-167 592.8 410 71.2
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 4.5e-167 591.7 431 67.7
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.0e-166 590.5 420 70.2
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 1.0e-166 590.5 410 70.7
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.3e-166 590.1 406 70.7
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.3e-166 590.1 406 70.7
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 1.7e-166 589.7 410 70.5
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 2.9e-166 589.0 409 70.7
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 1.1e-165 587.0 429 68.8
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 7.1e-165 584.3 363 78.5
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 7.1e-165 584.3 468 63.5
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.8e-163 579.7 406 69.7
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 8.2e-161 570.9 406 67.7
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 3.1e-160 568.9 368 75.3
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 1.0e-158 563.9 410 67.1
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 1.1e-157 560.5 361 74.5
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 5.5e-157 558.1 406 67.7
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 7.1e-157 557.8 360 73.6
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.2e-156 557.0 408 67.4
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 1.0e-155 553.9 521 57.0
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 3.9e-155 552.0 390 69.0
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 2.4e-152 542.7 406 66.5
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 9.4e-149 530.8 534 54.7
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 2.1e-148 529.6 377 69.2
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 2.2e-145 519.6 366 69.1
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 5.5e-141 505.0 406 63.5
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 2.3e-139 499.6 361 69.0
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 1.1e-136 490.7 380 64.7
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 4.1e-136 488.8 363 68.3
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 7.7e-135 484.6 318 73.0
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 1.5e-133 480.3 334 68.9
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 3.0e-131 472.6 333 68.8
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 7.0e-128 461.5 306 72.2
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 2.2e-126 456.4 427 56.7
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 1.8e-123 446.8 339 65.8
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.6e-122 443.0 343 65.0
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 5.2e-115 418.7 406 51.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 9.1e-112 407.9 282 69.9
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 3.5e-111 406.0 405 48.9
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 1.5e-109 400.6 402 50.7
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 1.9e-109 400.2 406 47.5
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 5.9e-103 378.6 313 60.7
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 1.6e-87 327.4 232 70.7
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.7e-81 307.4 204 68.6
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 4.9e-73 279.3 200 70.5
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 4.9e-73 279.3 232 62.5
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 1.5e-66 257.7 429 37.8
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 7.9e-63 245.4 402 37.1
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.3e-53 213.4 125 82.4
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 3.1e-51 206.8 127 73.2
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 4.6e-47 193.0 160 61.2
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 1.8e-43 181.0 410 30.7
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 5.3e-43 179.5 178 47.8
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.2e-39 168.3 228 45.2
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 8.2e-36 155.6 89 76.4
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 6.9e-35 152.5 429 26.8
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 2.0e-34 151.0 85 81.2
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 1.0e-33 148.7 114 65.8
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 2.2e-28 131.0 115 57.4
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 3.7e-28 130.2 125 50.4
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 2.9e-25 120.6 72 72.2
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 1.6e-18 98.2 65 70.8
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 2.6e-18 97.4 81 61.7
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 1.9e-16 91.3 42 97.6
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.0e-14 85.5 56 62.5
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 4.1e-11 73.6 71 53.5
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 4.2e-08 63.5 33 78.8
arahy.Tifrunner.gnm1.ann1.JG4R8Z Arachis hypogaea HOM05D034686 ORTHO05D082558 6.8e-06 56.2 43 60.5


User provided reference genes

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