Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g077510 Amaranthus hybridus HOM05D004531 ORTHO05D005484 6.0e-121 437.6 230 100.0
EL10Ac9g22646 Beta vulgaris HOM05D004531 ORTHO05D005484 1.3e-59 233.8 228 58.8
AUR62022353 Chenopodium quinoa HOM05D004531 ORTHO05D005484 1.1e-58 230.7 229 59.0
EL10Ac1g01672 Beta vulgaris HOM05D004531 ORTHO05D005484 1.5e-58 230.3 229 59.0
AUR62034356 Chenopodium quinoa HOM05D004531 ORTHO05D005484 5.6e-58 228.4 229 58.5
Manes.11G057800 Manihot esculenta HOM05D004531 ORTHO05D005484 6.1e-57 224.9 229 57.6
Potri.016G024300 Populus trichocarpa HOM05D004531 ORTHO05D005484 4.0e-56 222.2 229 56.3
TWI77G0822 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 2.6e-55 219.5 229 56.8
Sc15g0002670 Simmondsia chinensis HOM05D004531 ORTHO05D005484 9.8e-55 217.6 229 55.9
Prupe.8G106900 Prunus persica HOM05D004531 ORTHO05D005484 1.3e-54 217.2 228 56.6
Prupe.4G200900 Prunus persica HOM05D004531 ORTHO05D005484 1.7e-54 216.9 228 57.0
Sabra16G0021800 Salix brachista HOM05D004531 ORTHO05D005484 1.7e-54 216.9 229 55.0
PGR042G0151 Punica granatum HOM05D004531 ORTHO05D005484 2.2e-54 216.5 229 55.9
Lalb_Chr13g0291551 Lupinus albus HOM05D004531 ORTHO05D005484 2.9e-54 216.1 229 54.6
Eucgr.A02172 Eucalyptus grandis HOM05D004531 ORTHO05D005484 6.4e-54 214.9 227 54.6
Gohir.D10G227700 Gossypium hirsutum HOM05D004531 ORTHO05D005484 6.4e-54 214.9 229 54.6
MELO3C008757.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.4e-53 213.8 228 55.7
Lj7A661T48 Lonicera japonica HOM05D004531 ORTHO05D005484 1.4e-53 213.8 229 55.9
Cc06_g18540 Coffea canephora HOM05D004531 ORTHO05D005484 1.9e-53 213.4 229 55.0
Ciclev10012657m.g Citrus clementina HOM05D004531 ORTHO05D005484 2.4e-53 213.0 229 55.5
Dinv37065 Davidia involucrata HOM05D004531 ORTHO05D005484 2.4e-53 213.0 229 55.9
Glyma.08G077300 Glycine max HOM05D004531 ORTHO05D005484 7.0e-53 211.5 229 53.3
Thecc.05G127100 Theobroma cacao HOM05D004531 ORTHO05D005484 7.0e-53 211.5 229 53.7
Gohir.A06G180300 Gossypium hirsutum HOM05D004531 ORTHO05D005484 9.2e-53 211.1 229 54.1
Gorai.011G260100 Gossypium raimondii HOM05D004531 ORTHO05D005484 9.2e-53 211.1 229 54.1
Atru.chr2.471 Acer truncatum HOM05D004531 ORTHO05D005484 1.6e-52 210.3 229 54.6
ECA238G4589 Erigeron canadensis HOM05D004531 ORTHO05D005484 2.0e-52 209.9 228 53.9
CSS0023033 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 3.5e-52 209.1 229 54.6
CANSAT56G3883 Cannabis sativa HOM05D004531 ORTHO05D005484 4.6e-52 208.8 229 54.6
CsaV3_2G009570 Cucumis sativus L. HOM05D004531 ORTHO05D005484 4.6e-52 208.8 228 54.8
Duzib248G1029 Durio zibethinus HOM05D004531 ORTHO05D005484 4.6e-52 208.8 229 54.1
Sed0018245 Sechium edule HOM05D004531 ORTHO05D005484 4.6e-52 208.8 229 55.0
GSVIVG01029836001 Vitis vinifera HOM05D004531 ORTHO05D005484 7.8e-52 208.0 229 53.3
THA.LOC104820245 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 1.3e-51 207.2 230 53.5
VMungo0251G1523 Vigna mungo HOM05D004531 ORTHO05D005484 1.3e-51 207.2 229 52.8
Sabra16G0030200 Salix brachista HOM05D004531 ORTHO05D005484 1.7e-51 206.8 219 54.8
ClCG11G010890 Citrullus lanatus HOM05D004531 ORTHO05D005484 2.3e-51 206.5 228 53.9
Ca_18320_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 3.0e-51 206.1 229 53.7
vmacro07599 Vaccinium macrocarpon HOM05D004531 ORTHO05D005484 3.0e-51 206.1 234 52.6
HanXRQChr14g0437741 Helianthus annuus HOM05D004531 ORTHO05D005484 3.9e-51 205.7 229 52.4
CiPaw.08G117500 Carya illinoinensis HOM05D004531 ORTHO05D005484 5.0e-51 205.3 229 54.6
Hma1.2p1_0341F.1_g130530 Hydrangea macrophylla HOM05D004531 ORTHO05D005484 5.0e-51 205.3 229 54.6
SalBow6G4182 Salvia bowleyana HOM05D004531 ORTHO05D005484 5.0e-51 205.3 234 53.4
Nn5g28465 Nelumbo nucifera HOM05D004531 ORTHO05D005484 1.1e-50 204.1 229 55.0
Glyma.05G122300 Glycine max HOM05D004531 ORTHO05D005484 1.5e-50 203.8 229 53.3
arahy.Tifrunner.gnm1.ann1.35U2WI Arachis hypogaea HOM05D004531 ORTHO05D005484 1.9e-50 203.4 231 52.8
arahy.Tifrunner.gnm1.ann1.8UG22X Arachis hypogaea HOM05D004531 ORTHO05D005484 2.5e-50 203.0 231 52.8
FvH4_3g21660 Fragaria vesca HOM05D004531 ORTHO05D005484 2.5e-50 203.0 229 54.1
Ciclev10010418m.g Citrus clementina HOM05D004531 ORTHO05D005484 5.6e-50 201.8 229 52.8
Lj6g0006960 Lotus japonicus HOM05D004531 ORTHO05D005484 5.6e-50 201.8 229 53.3
RcHm_v2.0_Chr5g0037141 Rosa chinensis HOM05D004531 ORTHO05D005484 5.6e-50 201.8 229 53.7
CAN.G641.37 Capsicum annuum HOM05D004531 ORTHO05D005484 7.3e-50 201.4 229 52.0
Phvul.002G203400 Phaseolus vulgaris HOM05D004531 ORTHO05D005484 7.3e-50 201.4 229 50.7
Nitab4.5_0000646g0260 Nicotiana tabacum HOM05D004531 ORTHO05D005484 9.5e-50 201.1 229 52.0
COL.COLO4_07074 Corchorus olitorius HOM05D004531 ORTHO05D005484 2.1e-49 199.9 229 52.4
Migut.J01686 Erythranthe guttata HOM05D004531 ORTHO05D005484 2.8e-49 199.5 230 52.2
TAR374G0360 Trochodendron aralioides HOM05D004531 ORTHO05D005484 3.6e-49 199.1 225 52.4
MD11G1228700 Malus domestica HOM05D004531 ORTHO05D005484 8.0e-49 198.0 231 52.8
PGSC0003DMG400008162 Solanum tuberosum HOM05D004531 ORTHO05D005484 8.0e-49 198.0 229 51.1
arahy.Tifrunner.gnm1.ann1.JM9XLQ Arachis hypogaea HOM05D004531 ORTHO05D005484 1.4e-48 197.2 229 52.8
DCAR_020613 Daucus carota HOM05D004531 ORTHO05D005484 1.4e-48 197.2 228 51.8
Nitab4.5_0000082g0350 Nicotiana tabacum HOM05D004531 ORTHO05D005484 1.4e-48 197.2 234 50.0
MSTRG.6389 Avicennia marina HOM05D004531 ORTHO05D005484 1.8e-48 196.8 229 52.0
Medtr4g094380 Medicago truncatula HOM05D004531 ORTHO05D005484 1.8e-48 196.8 229 53.3
PSO210G4508 Papaver somniferum HOM05D004531 ORTHO05D005484 2.3e-48 196.4 227 52.0
Nitab4.5_0010736g0010 Nicotiana tabacum HOM05D004531 ORTHO05D005484 4.0e-48 195.7 229 52.0
Cpa.g.sc115.24 Carica papaya HOM05D004531 ORTHO05D005484 5.2e-48 195.3 230 51.7
Solyc10g079430.2 Solanum lycopersicum HOM05D004531 ORTHO05D005484 5.2e-48 195.3 229 50.2
BcaB02g08172 Brassica carinata HOM05D004531 ORTHO05D005484 6.8e-48 194.9 228 50.4
A04p01660 Brassica napus HOM05D004531 ORTHO05D005484 6.8e-48 194.9 228 50.9
MD15G1425000 Malus domestica HOM05D004531 ORTHO05D005484 6.8e-48 194.9 228 52.6
Psat7g095600 Pisum sativum HOM05D004531 ORTHO05D005484 6.8e-48 194.9 229 52.8
BcaC02g10151 Brassica carinata HOM05D004531 ORTHO05D005484 8.9e-48 194.5 228 50.4
TPR.G23804 Trifolium pratense HOM05D004531 ORTHO05D005484 8.9e-48 194.5 229 52.8
unitig_746.g26802 Utricularia gibba HOM05D004531 ORTHO05D005484 8.9e-48 194.5 230 50.4
C04p32210 Brassica napus HOM05D004531 ORTHO05D005484 1.5e-47 193.7 228 50.4
BraA09t40693Z Brassica rapa HOM05D004531 ORTHO05D005484 2.0e-47 193.4 228 50.4
Os01g0810000 Oryza sativa ssp. japonica HOM05D004531 ORTHO05D005484 2.6e-47 193.0 229 50.2
A09p52640 Brassica napus HOM05D004531 ORTHO05D005484 4.4e-47 192.2 228 50.4
BolC8t51130H Brassica oleracea HOM05D004531 ORTHO05D005484 5.8e-47 191.8 228 50.0
PSO210G2223 Papaver somniferum HOM05D004531 ORTHO05D005484 5.8e-47 191.8 227 50.7
C08p35370 Brassica napus HOM05D004531 ORTHO05D005484 9.8e-47 191.0 228 50.0
MBI13_g30229_MAGBIO Magnolia biondii HOM05D004531 ORTHO05D005484 9.8e-47 191.0 238 49.2
FAN11G1137 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.7e-46 190.3 251 49.4
BcaC07g42771 Brassica carinata HOM05D004531 ORTHO05D005484 2.2e-46 189.9 228 49.6
Lsat_1_v5_gn_2_52561 Lactuca sativa HOM05D004531 ORTHO05D005484 2.9e-46 189.5 219 51.1
Sp5g02860 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.9e-46 189.5 228 50.4
SpUn0080_0040 Schrenkiella parvula HOM05D004531 ORTHO05D005484 2.9e-46 189.5 228 50.4
SGA_v2.0_scaffold69G23138 Striga asiatica HOM05D004531 ORTHO05D005484 1.1e-45 187.6 230 49.1
HPP92_027481 Vanilla planifolia HOM05D004531 ORTHO05D005484 1.1e-45 187.6 229 50.2
MD11G1228500 Malus domestica HOM05D004531 ORTHO05D005484 1.4e-45 187.2 249 48.2
RhsimUnG0021500 Rhododendron simsii HOM05D004531 ORTHO05D005484 1.4e-45 187.2 254 47.6
Aa31LG3G11700 Aethionema arabicum HOM05D004531 ORTHO05D005484 4.1e-45 185.7 229 48.5
AL5G42600 Arabidopsis lyrata HOM05D004531 ORTHO05D005484 4.1e-45 185.7 228 49.6
Aqoxy2G03324 Aquilegia oxysepala HOM05D004531 ORTHO05D005484 7.0e-45 184.9 230 49.1
AT3G60360 Arabidopsis thaliana HOM05D004531 ORTHO05D005484 9.2e-45 184.5 228 48.7
CARHR170680 Cardamine hirsuta HOM05D004531 ORTHO05D005484 7.8e-44 181.4 228 49.1
Thhalv10006222m.g Eutrema salsugineum HOM05D004531 ORTHO05D005484 1.3e-43 180.6 228 48.7
Peaxi162Scf00002g10416 Petunia axillaris HOM05D004531 ORTHO05D005484 1.7e-43 180.3 262 43.9
Carub.0005s2711 Capsella rubella HOM05D004531 ORTHO05D005484 2.3e-43 179.9 228 49.1
MELO3C023654.2 Cucumis melo HOM05D004531 ORTHO05D005484 1.5e-42 177.2 235 47.2
Gohir.A08G129500 Gossypium hirsutum HOM05D004531 ORTHO05D005484 7.3e-42 174.9 229 48.9
Haze_23723 Corylus avellana HOM05D004531 ORTHO05D005484 4.7e-41 172.2 306 40.2
ClCG09G010350 Citrullus lanatus HOM05D004531 ORTHO05D005484 2.3e-40 169.9 218 48.2
CsaV3_7G024290 Cucumis sativus L. HOM05D004531 ORTHO05D005484 8.3e-38 161.4 225 45.3
SMO367G0994 Selaginella moellendorffii HOM05D004531 ORTHO05D005484 1.4e-37 160.6 228 42.5
Hund15691 Selenicereus undatus HOM05D004531 ORTHO05D005484 4.1e-37 159.1 144 61.8
AagrBONN_evm.TU.Sc2ySwM_228.1021 Anthoceros agrestis HOM05D004531 ORTHO05D005484 2.7e-36 156.4 230 44.3
Ca_08745_v3 Cicer arietinum L. HOM05D004531 ORTHO05D005484 1.0e-35 154.5 190 49.5
Zm00001eb369240 Zea mays HOM05D004531 ORTHO05D005484 1.3e-35 154.1 212 44.8
SGA_v2.0_scaffold105G30334 Striga asiatica HOM05D004531 ORTHO05D005484 1.7e-35 153.7 205 44.4
RhsimUnG0117400 Rhododendron simsii HOM05D004531 ORTHO05D005484 2.3e-35 153.3 316 37.7
QL09p051267 Quercus lobata HOM05D004531 ORTHO05D005484 5.1e-35 152.1 360 34.2
Duzib052G0496 Durio zibethinus HOM05D004531 ORTHO05D005484 3.3e-34 149.4 140 58.6
Hund22289 Selenicereus undatus HOM05D004531 ORTHO05D005484 7.3e-34 148.3 186 50.5
Mapoly0074s0052 Marchantia polymorpha HOM05D004531 ORTHO05D005484 2.1e-33 146.7 225 42.2
CDE07G2032 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 2.8e-33 146.4 161 55.3
Cfa002196 Carpinus fangiana HOM05D004531 ORTHO05D005484 4.4e-31 139.0 139 56.1
ATR1096G053 Amborella trichopoda HOM05D004531 ORTHO05D005484 6.4e-30 135.2 139 54.0
MCO16G699 Micromonas commoda HOM05D004531 ORTHO05D005484 6.4e-30 135.2 239 41.0
Pp3c3_27620 Physcomitrium patens HOM05D004531 ORTHO05D005484 1.1e-29 134.4 225 39.6
TAR636G0629 Trochodendron aralioides HOM05D004531 ORTHO05D005484 1.4e-29 134.0 182 45.6
Carub.0007s2695 Capsella rubella HOM05D004531 ORTHO05D005484 4.6e-28 129.0 145 53.1
Dinv14546 Davidia involucrata HOM05D004531 ORTHO05D005484 1.1e-26 124.4 116 58.6
Oeu020249.1 Olea europaea HOM05D004531 ORTHO05D005484 3.6e-25 119.4 111 58.6
CBR_g26482 Chara braunii HOM05D004531 ORTHO05D005484 6.2e-25 118.6 213 39.4
Psat3g051800 Pisum sativum HOM05D004531 ORTHO05D005484 7.6e-23 111.7 114 53.5
Pp3s222_10 Physcomitrium patens HOM05D004531 ORTHO05D005484 6.4e-22 108.6 151 43.0
Nitab4.5_0002805g0150 Nicotiana tabacum HOM05D004531 ORTHO05D005484 8.4e-22 108.2 163 44.2
PRCOL_00003072 Prasinoderma coloniale HOM05D004531 ORTHO05D005484 3.2e-21 106.3 267 32.6
FAN16G0044 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.2e-20 104.4 163 44.8
Cre13.g573050 Chlamydomonas reinhardtii HOM05D004531 ORTHO05D005484 1.6e-20 104.0 125 45.6
Sopen10g030070 Solanum pennellii HOM05D004531 ORTHO05D005484 2.1e-20 103.6 163 42.3
Potri.006G026002 Populus trichocarpa HOM05D004531 ORTHO05D005484 4.6e-20 102.4 91 59.3
THA.LOC104802556 Tarenaya hassleriana HOM05D004531 ORTHO05D005484 5.1e-19 99.0 104 53.8
FAN21G3808 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.9e-18 97.1 135 47.4
CDE07G0548 Ceratophyllum demersum HOM05D004531 ORTHO05D005484 5.3e-16 89.0 125 47.2
PSO210G0815 Papaver somniferum HOM05D004531 ORTHO05D005484 5.8e-15 85.5 101 50.5
BraA04t15890Z Brassica rapa HOM05D004531 ORTHO05D005484 9.9e-15 84.7 124 45.2
CSS0027948 Camellia sinensis var. sinensis HOM05D004531 ORTHO05D005484 1.2e-12 77.8 97 51.5
Gohir.A06G180400 Gossypium hirsutum HOM05D004531 ORTHO05D005484 1.2e-12 77.8 54 70.4
Cfa023089 Carpinus fangiana HOM05D004531 ORTHO05D005484 4.6e-12 75.9 71 53.5
Haze_26248 Corylus avellana HOM05D004531 ORTHO05D005484 1.8e-11 73.9 116 37.1
MD11G1228400 Malus domestica HOM05D004531 ORTHO05D005484 3.9e-11 72.8 111 45.9
TWI38G0613 Tripterygium wilfordii HOM05D004531 ORTHO05D005484 8.1e-09 65.1 68 57.4
ATR1096G046 Amborella trichopoda HOM05D004531 ORTHO05D005484 4.0e-08 62.8 66 50.0
FAN25G0149 Fragaria x ananassa HOM05D004531 ORTHO05D005484 1.0e-06 58.2 106 39.6


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