Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g076200 Amaranthus hybridus HOM05D004902 ORTHO05D006603 0.0e+00 1109.0 560 100.0
EL10Ac1g01638 Beta vulgaris HOM05D004902 ORTHO05D006603 4.4e-266 921.0 581 81.8
Sc02g0003710 Simmondsia chinensis HOM05D004902 ORTHO05D006603 1.4e-251 872.8 586 78.8
Hund26666 Selenicereus undatus HOM05D004902 ORTHO05D006603 1.7e-249 865.9 614 75.1
AUR62026758 Chenopodium quinoa HOM05D004902 ORTHO05D006603 2.9e-249 865.1 592 76.5
MELO3C013152.2 Cucumis melo HOM05D004902 ORTHO05D006603 6.4e-249 864.0 556 79.3
QL08p009339 Quercus lobata HOM05D004902 ORTHO05D006603 4.6e-247 857.8 552 79.0
Eucgr.F00742 Eucalyptus grandis HOM05D004902 ORTHO05D006603 6.6e-246 854.0 589 75.0
ClCG09G010930 Citrullus lanatus HOM05D004902 ORTHO05D006603 8.6e-246 853.6 556 78.2
Sed0009199 Sechium edule HOM05D004902 ORTHO05D006603 8.6e-246 853.6 563 77.6
CiPaw.11G191900 Carya illinoinensis HOM05D004902 ORTHO05D006603 4.3e-245 851.3 601 74.2
Cfa020314 Carpinus fangiana HOM05D004902 ORTHO05D006603 5.6e-245 850.9 588 75.5
arahy.Tifrunner.gnm1.ann1.67NMHM Arachis hypogaea HOM05D004902 ORTHO05D006603 7.3e-245 850.5 544 79.4
Hma1.2p1_0036F.1_g023440 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 9.5e-245 850.1 591 74.5
Medtr3g052850 Medicago truncatula HOM05D004902 ORTHO05D006603 1.2e-244 849.7 549 78.9
Glyma.18G093200 Glycine max HOM05D004902 ORTHO05D006603 1.8e-243 845.9 583 75.8
Migut.M01740 Erythranthe guttata HOM05D004902 ORTHO05D006603 2.3e-243 845.5 584 74.5
Psat5g177120 Pisum sativum HOM05D004902 ORTHO05D006603 6.8e-243 844.0 587 75.0
TAR362G0117 Trochodendron aralioides HOM05D004902 ORTHO05D006603 6.8e-243 844.0 544 78.9
Actinidia10742 Actinidia chinensis HOM05D004902 ORTHO05D006603 8.9e-243 843.6 602 73.6
Phvul.006G046400 Phaseolus vulgaris HOM05D004902 ORTHO05D006603 8.9e-243 843.6 587 75.3
arahy.Tifrunner.gnm1.ann1.E3581I Arachis hypogaea HOM05D004902 ORTHO05D006603 1.2e-242 843.2 575 76.2
TWI39G0824 Tripterygium wilfordii HOM05D004902 ORTHO05D006603 1.5e-242 842.8 547 79.3
Manes.03G132000 Manihot esculenta HOM05D004902 ORTHO05D006603 2.0e-242 842.4 590 75.1
Ca_14752_v3 Cicer arietinum L. HOM05D004902 ORTHO05D006603 3.4e-242 841.6 555 77.3
CSS0007833 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 5.8e-242 840.9 555 77.5
TPR.G33794 Trifolium pratense HOM05D004902 ORTHO05D006603 5.8e-242 840.9 555 77.5
CSS0000094 Camellia sinensis var. sinensis HOM05D004902 ORTHO05D006603 7.5e-242 840.5 555 77.7
RcHm_v2.0_Chr5g0040671 Rosa chinensis HOM05D004902 ORTHO05D006603 7.5e-242 840.5 544 78.7
FAN18G4155 Fragaria x ananassa HOM05D004902 ORTHO05D006603 2.2e-241 839.0 563 76.9
Gohir.A11G067600 Gossypium hirsutum HOM05D004902 ORTHO05D006603 2.2e-241 839.0 586 74.1
Lj4g0024994 Lotus japonicus HOM05D004902 ORTHO05D006603 3.7e-241 838.2 551 77.9
Dinv40776 Davidia involucrata HOM05D004902 ORTHO05D006603 4.9e-241 837.8 547 77.5
Prupe.4G217200 Prunus persica HOM05D004902 ORTHO05D006603 4.9e-241 837.8 544 78.1
GSVIVG01037683001 Vitis vinifera HOM05D004902 ORTHO05D006603 4.9e-241 837.8 585 74.4
THA.LOC104811618 Tarenaya hassleriana HOM05D004902 ORTHO05D006603 6.4e-241 837.4 563 76.0
Glyma.18G108300 Glycine max HOM05D004902 ORTHO05D006603 8.3e-241 837.0 584 75.0
CARHR234510 Cardamine hirsuta HOM05D004902 ORTHO05D006603 1.1e-240 836.6 577 73.7
HanXRQChr05g0159411 Helianthus annuus HOM05D004902 ORTHO05D006603 1.1e-240 836.6 562 76.5
Lsat_1_v5_gn_5_3021 Lactuca sativa HOM05D004902 ORTHO05D006603 1.1e-240 836.6 581 74.5
Ciclev10007818m.g Citrus clementina HOM05D004902 ORTHO05D006603 1.9e-240 835.9 587 74.3
Aqoxy5G00324 Aquilegia oxysepala HOM05D004902 ORTHO05D006603 2.4e-240 835.5 553 76.3
Gohir.D11G071500 Gossypium hirsutum HOM05D004902 ORTHO05D006603 3.2e-240 835.1 586 73.5
Atru.chr2.3483 Acer truncatum HOM05D004902 ORTHO05D006603 4.1e-240 834.7 575 75.1
SGA_v2.0_scaffold172G39008 Striga asiatica HOM05D004902 ORTHO05D006603 5.4e-240 834.3 584 73.8
Lalb_Chr10g0107081 Lupinus albus HOM05D004902 ORTHO05D006603 7.0e-240 833.9 562 76.5
Gorai.007G076800 Gossypium raimondii HOM05D004902 ORTHO05D006603 1.2e-239 833.2 585 73.7
HanXRQChr08g0233501 Helianthus annuus HOM05D004902 ORTHO05D006603 1.2e-239 833.2 561 76.8
Carub.0007s1395 Capsella rubella HOM05D004902 ORTHO05D006603 1.6e-239 832.8 588 72.8
MD03G1198000 Malus domestica HOM05D004902 ORTHO05D006603 1.6e-239 832.8 560 75.9
AL7G25950 Arabidopsis lyrata HOM05D004902 ORTHO05D006603 2.7e-239 832.0 594 72.2
AT4G26900 Arabidopsis thaliana HOM05D004902 ORTHO05D006603 4.6e-239 831.2 595 72.3
Lj1A876G36 Lonicera japonica HOM05D004902 ORTHO05D006603 1.0e-238 830.1 586 73.5
PGR083G1168 Punica granatum HOM05D004902 ORTHO05D006603 1.3e-238 829.7 544 78.1
Thhalv10024744m.g Eutrema salsugineum HOM05D004902 ORTHO05D006603 3.0e-238 828.6 577 73.3
FAN04G1963 Fragaria x ananassa HOM05D004902 ORTHO05D006603 6.6e-238 827.4 565 76.3
Potri.009G061700 Populus trichocarpa HOM05D004902 ORTHO05D006603 1.1e-237 826.6 584 73.1
Aa31LG3G11010 Aethionema arabicum HOM05D004902 ORTHO05D006603 1.5e-237 826.2 595 72.4
FAN13G3021 Fragaria x ananassa HOM05D004902 ORTHO05D006603 1.5e-237 826.2 577 74.7
Sopen07g033000 Solanum pennellii HOM05D004902 ORTHO05D006603 1.9e-237 825.9 549 76.3
Solyc07g064810.3 Solanum lycopersicum HOM05D004902 ORTHO05D006603 2.5e-237 825.5 549 76.1
ECA246G3742 Erigeron canadensis HOM05D004902 ORTHO05D006603 9.5e-237 823.5 577 74.2
Sp7g24850 Schrenkiella parvula HOM05D004902 ORTHO05D006603 9.5e-237 823.5 592 71.8
Thecc.09G123200 Theobroma cacao HOM05D004902 ORTHO05D006603 9.5e-237 823.5 577 74.7
C01p23080 Brassica napus HOM05D004902 ORTHO05D006603 2.1e-236 822.4 590 72.2
PGSC0003DMG400022211 Solanum tuberosum HOM05D004902 ORTHO05D006603 2.1e-236 822.4 549 76.3
MSTRG.14441 Avicennia marina HOM05D004902 ORTHO05D006603 3.6e-236 821.6 580 73.4
CAN.G337.72 Capsicum annuum HOM05D004902 ORTHO05D006603 3.6e-236 821.6 549 76.5
CANSAT11G1621 Cannabis sativa HOM05D004902 ORTHO05D006603 6.2e-236 820.8 589 72.8
Potri.001G267400 Populus trichocarpa HOM05D004902 ORTHO05D006603 6.2e-236 820.8 580 73.3
Duzib264G0382 Durio zibethinus HOM05D004902 ORTHO05D006603 2.3e-235 818.9 558 76.2
BolC1t02242H Brassica oleracea HOM05D004902 ORTHO05D006603 5.8e-234 814.3 592 71.8
ATR0736G184 Amborella trichopoda HOM05D004902 ORTHO05D006603 9.8e-234 813.5 539 77.2
Oeu013136.2 Olea europaea HOM05D004902 ORTHO05D006603 1.3e-233 813.1 591 71.1
A04p12110 Brassica napus HOM05D004902 ORTHO05D006603 1.7e-233 812.8 594 72.1
MSTRG.12985 Avicennia marina HOM05D004902 ORTHO05D006603 2.2e-233 812.4 533 76.9
C04p45770 Brassica napus HOM05D004902 ORTHO05D006603 4.9e-233 811.2 590 72.2
Oeu062577.2 Olea europaea HOM05D004902 ORTHO05D006603 6.4e-233 810.8 592 71.3
CDE02G3624 Ceratophyllum demersum HOM05D004902 ORTHO05D006603 1.4e-232 809.7 588 72.1
BolC4t26162H Brassica oleracea HOM05D004902 ORTHO05D006603 1.9e-232 809.3 592 72.1
BcaB06g27301 Brassica carinata HOM05D004902 ORTHO05D006603 2.4e-232 808.9 590 71.9
Nn8g38868 Nelumbo nucifera HOM05D004902 ORTHO05D006603 5.4e-232 807.7 520 78.1
COL.COLO4_19537 Corchorus olitorius HOM05D004902 ORTHO05D006603 2.3e-230 802.4 585 72.1
Haze_09705 Corylus avellana HOM05D004902 ORTHO05D006603 3.0e-230 802.0 586 72.5
Gorai.011G209600 Gossypium raimondii HOM05D004902 ORTHO05D006603 2.1e-228 795.8 568 73.6
BcaNung03568 Brassica carinata HOM05D004902 ORTHO05D006603 6.2e-228 794.3 591 70.4
BraA04t16876Z Brassica rapa HOM05D004902 ORTHO05D006603 1.8e-227 792.7 622 68.8
Gohir.D10G186800 Gossypium hirsutum HOM05D004902 ORTHO05D006603 8.9e-227 790.4 568 73.1
FAN08G0007 Fragaria x ananassa HOM05D004902 ORTHO05D006603 5.4e-224 781.2 553 74.0
HPP92_013494 Vanilla planifolia HOM05D004902 ORTHO05D006603 9.2e-224 780.4 543 72.7
Rhsim06G0219700 Rhododendron simsii HOM05D004902 ORTHO05D006603 8.6e-222 773.9 580 69.5
Sabra16G0163900 Salix brachista HOM05D004902 ORTHO05D006603 7.3e-221 770.8 651 64.1
HPP92_026047 Vanilla planifolia HOM05D004902 ORTHO05D006603 9.6e-221 770.4 537 72.8
Gohir.A10G179900 Gossypium hirsutum HOM05D004902 ORTHO05D006603 1.8e-219 766.1 602 68.9
PSO210G2842 Papaver somniferum HOM05D004902 ORTHO05D006603 5.2e-219 764.6 560 71.6
PSO832G3378 Papaver somniferum HOM05D004902 ORTHO05D006603 6.9e-219 764.2 560 71.6
AagrBONN_evm.TU.Sc2ySwM_117.3547 Anthoceros agrestis HOM05D004902 ORTHO05D006603 2.2e-217 759.2 551 70.1
vmacro02220 Vaccinium macrocarpon HOM05D004902 ORTHO05D006603 3.8e-217 758.4 596 67.3
Os03g0256400 Oryza sativa ssp. japonica HOM05D004902 ORTHO05D006603 9.3e-216 753.8 540 70.9
FvH4_5g29730 Fragaria vesca HOM05D004902 ORTHO05D006603 1.2e-215 753.4 479 79.7
CsaV3_7G021940 Cucumis sativus L. HOM05D004902 ORTHO05D006603 1.6e-212 743.0 523 73.0
Mapoly0071s0086 Marchantia polymorpha HOM05D004902 ORTHO05D006603 6.4e-209 731.1 595 65.2
CBR_g4356 Chara braunii HOM05D004902 ORTHO05D006603 5.4e-208 728.0 554 67.3
Pp3c1_20280 Physcomitrium patens HOM05D004902 ORTHO05D006603 4.6e-207 724.9 540 69.3
Peaxi162Scf00235g00424 Petunia axillaris HOM05D004902 ORTHO05D006603 2.3e-206 722.6 574 68.1
AUR62013514 Chenopodium quinoa HOM05D004902 ORTHO05D006603 6.2e-204 714.5 569 68.5
SMO119G0352 Selaginella moellendorffii HOM05D004902 ORTHO05D006603 9.0e-203 710.7 532 68.8
DCAR_022578 Daucus carota HOM05D004902 ORTHO05D006603 3.2e-200 702.2 579 66.3
Hma1.2p1_0036F.1_g023430 Hydrangea macrophylla HOM05D004902 ORTHO05D006603 4.5e-194 681.8 478 72.4
Nitab4.5_0022774g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 1.6e-191 673.3 463 74.1
unitig_85.g27329 Utricularia gibba HOM05D004902 ORTHO05D006603 1.8e-182 643.3 518 66.0
MCO02G311 Micromonas commoda HOM05D004902 ORTHO05D006603 2.9e-169 599.4 548 58.4
Nitab4.5_0013139g0010 Nicotiana tabacum HOM05D004902 ORTHO05D006603 6.3e-164 581.6 405 73.8
CAN.G677.16 Capsicum annuum HOM05D004902 ORTHO05D006603 1.9e-160 570.1 522 60.9
MD11G1214000 Malus domestica HOM05D004902 ORTHO05D006603 9.8e-149 531.2 341 80.6
HanXRQChr08g0233821 Helianthus annuus HOM05D004902 ORTHO05D006603 1.8e-147 526.9 410 70.0
A01p18110 Brassica napus HOM05D004902 ORTHO05D006603 1.5e-144 517.3 545 55.2
PRCOL_00006765 Prasinoderma coloniale HOM05D004902 ORTHO05D006603 2.1e-143 513.5 510 55.5
Zm00001eb011150 Zea mays HOM05D004902 ORTHO05D006603 3.0e-142 509.6 356 75.6
Cfa025092 Carpinus fangiana HOM05D004902 ORTHO05D006603 3.8e-137 492.7 543 50.1
Cre11.g481500 Chlamydomonas reinhardtii HOM05D004902 ORTHO05D006603 3.6e-119 433.0 554 46.9
Cpa.g.sc12.277 Carica papaya HOM05D004902 ORTHO05D006603 4.6e-114 416.0 257 84.0
MD11G1213900 Malus domestica HOM05D004902 ORTHO05D006603 4.5e-77 293.1 190 72.1
Cpa.g.c34168 Carica papaya HOM05D004902 ORTHO05D006603 2.2e-76 290.8 251 60.6
Lsat_1_v5_gn_3_2301 Lactuca sativa HOM05D004902 ORTHO05D006603 3.4e-69 266.9 395 43.0
Glyma.08G323300 Glycine max HOM05D004902 ORTHO05D006603 3.2e-59 233.8 208 58.7
Zm00001eb081410 Zea mays HOM05D004902 ORTHO05D006603 1.8e-46 191.4 199 51.8
SEGI_16435 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 1.0e-41 175.6 111 82.0
RcHm_v2.0_Chr4g0412471 Rosa chinensis HOM05D004902 ORTHO05D006603 4.4e-40 170.2 140 65.0
Ah.01g018890 Amaranthus hybridus HOM05D004902 ORTHO05D006603 9.1e-38 162.5 149 64.4
SEGI_31768 Sequoiadendron giganteum HOM05D004902 ORTHO05D006603 3.8e-36 157.1 111 64.0
VMungo0540G1125 Vigna mungo HOM05D004902 ORTHO05D006603 6.5e-36 156.4 165 55.8
BraA01t01766Z Brassica rapa HOM05D004902 ORTHO05D006603 1.4e-30 138.7 99 69.7
Aqoxy84s005 Aquilegia oxysepala HOM05D004902 ORTHO05D038539 7.0e-30 136.3 297 33.0
Lsat_1_v5_gn_0_44000 Lactuca sativa HOM05D004902 ORTHO05D038539 8.0e-26 122.9 295 34.2
Glyma.08G319400 Glycine max HOM05D004902 ORTHO05D029739 1.8e-25 121.7 75 85.3
BcaNung03560 Brassica carinata HOM05D004902 ORTHO05D006603 3.3e-19 100.9 84 64.3
FvH4_6g25500 Fragaria vesca HOM05D000003 ORTHO05D000007 1.7e-15 88.6 59 74.6
Lsat_1_v5_gn_3_69341 Lactuca sativa HOM05D004902 ORTHO05D006603 6.0e-13 80.1 126 41.3
Lsat_1_v5_gn_4_11281 Lactuca sativa HOM05D004902 ORTHO05D006603 5.0e-12 77.0 111 43.2
TPR.G39977 Trifolium pratense HOM05D004902 ORTHO05D006603 9.5e-11 72.8 41 78.0
RcHm_v2.0_Chr5g0040621 Rosa chinensis HOM05D004902 ORTHO05D006603 8.9e-09 66.2 37 86.5
TWI38G0888 Tripterygium wilfordii HOM05D004902 ORTHO05D029739 2.0e-08 65.1 94 48.9
HanXRQChr08g0233831 Helianthus annuus HOM05D004902 ORTHO05D006603 2.2e-07 61.6 41 70.7
BcaNung03565 Brassica carinata HOM05D004902 ORTHO05D006603 8.3e-07 59.7 89 46.1
Lsat_1_v5_gn_0_720 Lactuca sativa HOM05D004902 ORTHO05D029739 1.9e-06 58.5 56 55.4
Lsat_1_v5_gn_2_18401 Lactuca sativa HOM05D004902 ORTHO05D233888 4.1e-06 57.4 112 36.6
GSVIVG01021644001 Vitis vinifera HOM05D004902 ORTHO05D024725 4.1e-06 57.4 36 66.7


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