Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g076080 Amaranthus hybridus HOM05D006621 ORTHO05D008425 0.0e+00 1085.5 566 100.0
EL10Ac3g06943 Beta vulgaris HOM05D006621 ORTHO05D008425 1.6e-255 885.9 559 82.1
Hund19192 Selenicereus undatus HOM05D006621 ORTHO05D008425 9.6e-245 850.1 589 77.2
AUR62012064 Chenopodium quinoa HOM05D006621 ORTHO05D008425 6.2e-236 820.8 523 81.8
AUR62024325 Chenopodium quinoa HOM05D006621 ORTHO05D008425 6.9e-235 817.4 567 76.9
Sc13g0002140 Simmondsia chinensis HOM05D006621 ORTHO05D008425 1.1e-221 773.5 567 73.0
Dinv24092 Davidia involucrata HOM05D006621 ORTHO05D008425 6.7e-214 747.7 569 69.9
CSS0004967 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D008425 1.0e-206 723.8 571 67.8
GSVIVG01033523001 Vitis vinifera HOM05D006621 ORTHO05D008425 6.7e-206 721.1 570 68.6
Nitab4.5_0000016g0290 Nicotiana tabacum HOM05D006621 ORTHO05D008425 2.2e-204 716.1 565 66.5
Cc00_g14610 Coffea canephora HOM05D006621 ORTHO05D008425 3.7e-204 715.3 568 66.4
Lju124A29T46 Lonicera japonica HOM05D006621 ORTHO05D008425 2.6e-202 709.1 574 65.5
CAN.G691.11 Capsicum annuum HOM05D006621 ORTHO05D008425 7.7e-202 707.6 563 66.6
Ciclev10011385m.g Citrus clementina HOM05D006621 ORTHO05D008425 2.2e-201 706.1 577 66.6
PSO339G6474 Papaver somniferum HOM05D006621 ORTHO05D008425 2.2e-201 706.1 570 65.4
Actinidia38574 Actinidia chinensis HOM05D006621 ORTHO05D008425 5.0e-201 704.9 570 65.8
MSTRG.6466 Avicennia marina HOM05D006621 ORTHO05D008425 1.1e-200 703.7 569 66.1
PGR142G0547 Punica granatum HOM05D006621 ORTHO05D008425 2.5e-200 702.6 565 66.0
Nn1g01946 Nelumbo nucifera HOM05D006621 ORTHO05D008425 5.5e-200 701.4 570 66.0
Sopen03g013060 Solanum pennellii HOM05D006621 ORTHO05D008425 2.7e-199 699.1 564 64.7
Eucgr.K01826 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.6e-199 698.7 563 66.4
Lsat_1_v5_gn_5_164180 Lactuca sativa HOM05D006621 ORTHO05D008425 4.7e-199 698.4 560 66.4
QL07p023160 Quercus lobata HOM05D006621 ORTHO05D008425 8.0e-199 697.6 569 65.7
Hma1.2p1_0005F.1_g004290 Hydrangea macrophylla HOM05D006621 ORTHO05D008425 1.0e-198 697.2 564 65.6
Rhsim04G0097900 Rhododendron simsii HOM05D006621 ORTHO05D008425 1.4e-198 696.8 590 63.1
arahy.Tifrunner.gnm1.ann1.G78CS5 Arachis hypogaea HOM05D006621 ORTHO05D008425 1.5e-197 693.3 565 65.5
PSO384G1846 Papaver somniferum HOM05D006621 ORTHO05D008425 7.5e-197 691.0 570 64.7
ClCG04G002310 Citrullus lanatus HOM05D006621 ORTHO05D008425 9.7e-197 690.6 564 64.9
RcHm_v2.0_Chr3g0480241 Rosa chinensis HOM05D006621 ORTHO05D008425 1.3e-196 690.3 568 66.0
HanXRQChr01g0009671 Helianthus annuus HOM05D006621 ORTHO05D008425 2.8e-196 689.1 562 65.3
FvH4_6g22670 Fragaria vesca HOM05D006621 ORTHO05D008425 3.7e-196 688.7 565 65.7
CiPaw.09G032000 Carya illinoinensis HOM05D006621 ORTHO05D008425 4.8e-196 688.3 568 65.8
THA.LOC104799308 Tarenaya hassleriana HOM05D006621 ORTHO05D008425 4.8e-196 688.3 566 64.1
AL6G16950 Arabidopsis lyrata HOM05D006621 ORTHO05D008425 6.3e-196 688.0 564 64.4
Thecc.05G168600 Theobroma cacao HOM05D006621 ORTHO05D008425 1.1e-195 687.2 573 64.6
CARHR206340 Cardamine hirsuta HOM05D006621 ORTHO05D008425 1.4e-195 686.8 567 64.2
FAN09G2006 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.8e-195 686.4 565 65.1
Sed0013147 Sechium edule HOM05D006621 ORTHO05D008425 2.4e-195 686.0 564 64.5
COL.COLO4_36135 Corchorus olitorius HOM05D006621 ORTHO05D008425 3.1e-195 685.6 579 64.6
FAN02G3731 Fragaria x ananassa HOM05D006621 ORTHO05D008425 4.1e-195 685.3 565 65.1
CsaV3_4G030430 Cucumis sativus L. HOM05D006621 ORTHO05D008425 5.3e-195 684.9 564 64.2
Lj5g0023768 Lotus japonicus HOM05D006621 ORTHO05D008425 7.0e-195 684.5 567 64.0
Duzib128G0108 Durio zibethinus HOM05D006621 ORTHO05D008425 1.6e-194 683.3 573 64.4
Cfa016900 Carpinus fangiana HOM05D006621 ORTHO05D008425 2.0e-194 682.9 559 65.7
FAN05G4150 Fragaria x ananassa HOM05D006621 ORTHO05D008425 2.0e-194 682.9 565 65.1
ECA248G1459 Erigeron canadensis HOM05D006621 ORTHO05D008425 4.5e-194 681.8 566 64.5
Gorai.006G141700 Gossypium raimondii HOM05D006621 ORTHO05D008425 7.7e-194 681.0 571 64.3
Gohir.D09G123264 Gossypium hirsutum HOM05D006621 ORTHO05D008425 1.0e-193 680.6 571 64.3
Potri.006G059500 Populus trichocarpa HOM05D006621 ORTHO05D008425 1.0e-193 680.6 569 64.0
FAN14G1344 Fragaria x ananassa HOM05D006621 ORTHO05D008425 1.3e-193 680.2 580 64.1
AT5G06830 Arabidopsis thaliana HOM05D006621 ORTHO05D008425 5.0e-193 678.3 564 64.0
Carub.0006s0572 Capsella rubella HOM05D006621 ORTHO05D008425 6.5e-193 677.9 564 63.8
Manes.09G032200 Manihot esculenta HOM05D006621 ORTHO05D008425 8.5e-193 677.6 575 64.0
Glyma.02G176900 Glycine max HOM05D006621 ORTHO05D008425 2.5e-192 676.0 567 63.0
MD14G1060600 Malus domestica HOM05D006621 ORTHO05D008425 5.5e-192 674.9 567 64.2
Sp6g36030 Schrenkiella parvula HOM05D006621 ORTHO05D008425 5.5e-192 674.9 566 63.8
Gohir.A09G126800 Gossypium hirsutum HOM05D006621 ORTHO05D008425 7.2e-192 674.5 572 63.8
Atru.chr8.1052 Acer truncatum HOM05D006621 ORTHO05D008425 1.6e-191 673.3 572 62.8
Oeu008113.1 Olea europaea HOM05D006621 ORTHO05D008425 2.1e-191 672.9 570 64.9
Aqoxy1G00197 Aquilegia oxysepala HOM05D006621 ORTHO05D008425 2.7e-191 672.5 582 63.4
BcaC06g32538 Brassica carinata HOM05D006621 ORTHO05D008425 3.6e-191 672.2 565 63.5
Migut.J01819 Erythranthe guttata HOM05D006621 ORTHO05D008425 4.7e-191 671.8 571 63.7
FAN14G0291 Fragaria x ananassa HOM05D006621 ORTHO05D008425 5.2e-190 668.3 565 64.6
Haze_19963 Corylus avellana HOM05D006621 ORTHO05D008425 8.8e-190 667.5 560 64.5
MELO3C008903.2 Cucumis melo HOM05D006621 ORTHO05D008425 8.8e-190 667.5 564 63.3
Aa31LG11G7690 Aethionema arabicum HOM05D006621 ORTHO05D008425 5.7e-189 664.8 565 63.7
Thhalv10013160m.g Eutrema salsugineum HOM05D006621 ORTHO05D008425 7.5e-189 664.5 567 62.4
TWI74G0211 Tripterygium wilfordii HOM05D006621 ORTHO05D008425 2.8e-188 662.5 565 63.5
Ca_26117_v3 Cicer arietinum L. HOM05D006621 ORTHO05D008425 4.8e-188 661.8 565 63.4
TPR.G24898 Trifolium pratense HOM05D006621 ORTHO05D008425 1.8e-187 659.8 569 61.9
Sabra06G0042800 Salix brachista HOM05D006621 ORTHO05D008425 3.1e-187 659.1 574 61.8
Medtr1g053520 Medicago truncatula HOM05D006621 ORTHO05D008425 7.0e-187 657.9 568 62.3
Glyma.10G091600 Glycine max HOM05D006621 ORTHO05D008425 1.2e-186 657.1 568 62.0
arahy.Tifrunner.gnm1.ann1.ZJT11U Arachis hypogaea HOM05D006621 ORTHO05D008425 1.6e-186 656.8 637 57.6
Phvul.007G257900 Phaseolus vulgaris HOM05D006621 ORTHO05D008425 1.6e-186 656.8 566 61.7
CANSAT64G2439 Cannabis sativa HOM05D006621 ORTHO05D008425 4.5e-186 655.2 570 63.0
Lalb_Chr21g0317041 Lupinus albus HOM05D006621 ORTHO05D008425 7.2e-184 647.9 567 61.4
VMungo0720G2363 Vigna mungo HOM05D006621 ORTHO05D008425 6.8e-182 641.3 566 60.2
SalBow6G6334 Salvia bowleyana HOM05D006621 ORTHO05D008425 2.0e-181 639.8 573 61.3
BcaC06g32399 Brassica carinata HOM05D006621 ORTHO05D008425 1.4e-179 633.6 564 60.6
A10p29540 Brassica napus HOM05D006621 ORTHO05D008425 1.4e-179 633.6 564 60.8
BolC9t59734H Brassica oleracea HOM05D006621 ORTHO05D008425 1.4e-179 633.6 564 60.6
BraA10t44997Z Brassica rapa HOM05D006621 ORTHO05D008425 1.4e-179 633.6 564 60.8
C09p69910 Brassica napus HOM05D006621 ORTHO05D008425 4.1e-179 632.1 564 60.5
vmacro09106 Vaccinium macrocarpon HOM05D006621 ORTHO05D008425 1.6e-178 630.2 538 63.4
Nitab4.5_0003572g0080 Nicotiana tabacum HOM05D006621 ORTHO05D008425 5.0e-177 625.2 562 60.1
Os06g0320100 Oryza sativa ssp. japonica HOM05D006621 ORTHO05D008425 5.0e-177 625.2 570 59.5
CDE10G0898 Ceratophyllum demersum HOM05D006621 ORTHO05D008425 1.2e-167 594.0 576 56.6
HPP92_015468 Vanilla planifolia HOM05D006621 ORTHO05D008425 2.1e-167 593.2 575 54.4
ATR0605G120 Amborella trichopoda HOM05D006621 ORTHO05D008425 2.8e-167 592.8 573 57.8
Prupe.7G073900 Prunus persica HOM05D006621 ORTHO05D008425 3.4e-165 585.9 563 59.0
Zm00001eb381660 Zea mays HOM05D006621 ORTHO05D008425 4.4e-165 585.5 635 53.4
unitig_27.g25079 Utricularia gibba HOM05D006621 ORTHO05D008425 2.0e-162 576.6 527 59.6
Peaxi162Scf00258g00117 Petunia axillaris HOM05D006621 ORTHO05D008425 1.3e-161 573.9 481 63.2
Psat6g126120 Pisum sativum HOM05D006621 ORTHO05D008425 4.6e-146 522.3 508 56.7
Cpa.g.sc85.87 Carica papaya HOM05D006621 ORTHO05D008425 5.1e-129 465.7 418 58.9
Zm00001eb381720 Zea mays HOM05D006621 ORTHO05D008425 1.1e-123 448.0 450 58.0
AagrBONN_evm.TU.Sc2ySwM_228.2467 Anthoceros agrestis HOM05D006621 ORTHO05D008425 6.5e-116 422.2 559 44.4
Mapoly0080s0041 Marchantia polymorpha HOM05D006621 ORTHO05D008425 1.2e-114 417.9 576 41.7
Eucgr.D02420 Eucalyptus grandis HOM05D006621 ORTHO05D008425 3.2e-107 393.3 412 57.0
Pp3c23_21740 Physcomitrium patens HOM05D006621 ORTHO05D008425 1.1e-96 358.2 578 36.3
CBR_g3749 Chara braunii HOM05D006621 ORTHO05D008425 3.7e-95 353.2 589 38.5
SMO134G0088 Selaginella moellendorffii HOM05D006621 ORTHO05D008425 1.4e-94 351.3 560 40.0
Solyc03g059030.4 Solanum lycopersicum HOM05D006621 ORTHO05D008425 1.5e-93 347.8 291 64.9
TAR636G0143 Trochodendron aralioides HOM05D006621 ORTHO05D008425 2.7e-90 337.0 238 72.7
MD12G1060300 Malus domestica HOM05D006621 ORTHO05D008425 6.3e-87 325.9 225 71.6
TAR636G2274 Trochodendron aralioides HOM05D006621 ORTHO05D008425 3.1e-86 323.6 301 63.1
MD12G1060400 Malus domestica HOM05D006621 ORTHO05D008425 2.2e-71 274.2 226 67.3
DCAR_019796 Daucus carota HOM05D006621 ORTHO05D008425 7.2e-67 259.2 267 52.4
Lsat_1_v5_gn_1_107121 Lactuca sativa HOM05D006621 ORTHO05D008425 1.6e-66 258.1 374 46.0
SEGI_27578 Sequoiadendron giganteum HOM05D006621 ORTHO05D008425 8.0e-66 255.8 243 55.6
CAN.G654.6 Capsicum annuum HOM05D006621 ORTHO05D008425 6.6e-60 236.1 162 75.9
Oeu033745.1 Olea europaea HOM05D006621 ORTHO05D008425 3.6e-50 203.8 214 54.2
Cre01.g047229 Chlamydomonas reinhardtii HOM05D006621 ORTHO05D008425 6.8e-49 199.5 578 27.7
RcHm_v2.0_Chr3g0476251 Rosa chinensis HOM05D006621 ORTHO05D008425 6.6e-36 156.4 156 60.3
Lsat_1_v5_gn_5_170341 Lactuca sativa HOM05D006621 ORTHO05D008425 1.2e-34 152.1 151 55.0
FAN02G0678 Fragaria x ananassa HOM05D006621 ORTHO05D008425 7.6e-24 116.3 71 74.6
CSS0033542 Camellia sinensis var. sinensis HOM05D006621 ORTHO05D043305 5.4e-14 83.6 56 78.6
DCAR_028612 Daucus carota HOM05D006621 ORTHO05D008425 4.9e-07 60.5 41 68.3


User provided reference genes

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