Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g075000 Amaranthus hybridus HOM05D004599 ORTHO05D005564 1.9e-26 121.7 60 100.0
EL10Ac3g06729 Beta vulgaris HOM05D004599 ORTHO05D005564 1.2e-15 85.9 43 95.3
Sc19g0005730 Simmondsia chinensis HOM05D004599 ORTHO05D005564 1.2e-15 85.9 43 93.0
AUR62035896 Chenopodium quinoa HOM05D004599 ORTHO05D005564 2.0e-15 85.1 43 95.3
Hund19266 Selenicereus undatus HOM05D004599 ORTHO05D005564 2.6e-15 84.7 44 90.9
CANSAT78G2223 Cannabis sativa HOM05D004599 ORTHO05D005564 3.4e-15 84.3 43 93.0
Ciclev10004289m.g Citrus clementina HOM05D004599 ORTHO05D005564 4.4e-15 84.0 43 90.7
AUR62035344 Chenopodium quinoa HOM05D004599 ORTHO05D005564 7.5e-15 83.2 43 90.7
MD13G1226600 Malus domestica HOM05D004599 ORTHO05D005564 9.8e-15 82.8 43 86.0
Aqoxy5G00088 Aquilegia oxysepala HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 88.4
arahy.Tifrunner.gnm1.ann1.7X6UW5 Arachis hypogaea HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 86.0
FvH4_4g05250 Fragaria vesca HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 88.4
FAN07G1323 Fragaria x ananassa HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 88.4
FAN17G0126 Fragaria x ananassa HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 88.4
FAN22G0163 Fragaria x ananassa HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 88.4
RcHm_v2.0_Chr4g0396161 Rosa chinensis HOM05D004599 ORTHO05D005564 1.3e-14 82.4 43 88.4
Cfa014829 Carpinus fangiana HOM05D004599 ORTHO05D005564 1.7e-14 82.0 43 86.0
CiPaw.01G175100 Carya illinoinensis HOM05D004599 ORTHO05D005564 1.7e-14 82.0 43 86.0
Nn1g03051 Nelumbo nucifera HOM05D004599 ORTHO05D005564 2.2e-14 81.6 43 86.0
Lsat_1_v5_gn_6_67861 Lactuca sativa HOM05D004599 ORTHO05D005564 2.9e-14 81.3 43 83.7
TWI09G0954 Tripterygium wilfordii HOM05D004599 ORTHO05D005564 2.9e-14 81.3 43 83.7
GSVIVG01001869001 Vitis vinifera HOM05D004599 ORTHO05D005564 3.7e-14 80.9 43 86.0
COL.COLO4_07140 Corchorus olitorius HOM05D004599 ORTHO05D005564 4.9e-14 80.5 43 86.0
MELO3C022936.2 Cucumis melo HOM05D004599 ORTHO05D005564 6.4e-14 80.1 43 83.7
CsaV3_5G015660 Cucumis sativus L. HOM05D004599 ORTHO05D005564 6.4e-14 80.1 43 83.7
FAN12G1799 Fragaria x ananassa HOM05D004599 ORTHO05D005564 6.4e-14 80.1 43 86.0
Gohir.A02G025500 Gossypium hirsutum HOM05D004599 ORTHO05D005564 6.4e-14 80.1 42 88.1
Potri.010G062700 Populus trichocarpa HOM05D004599 ORTHO05D005564 6.4e-14 80.1 43 83.7
Actinidia25093 Actinidia chinensis HOM05D004599 ORTHO05D005564 8.3e-14 79.7 43 83.7
Actinidia35930 Actinidia chinensis HOM05D004599 ORTHO05D005564 8.3e-14 79.7 43 83.7
Glyma.10G130800 Glycine max HOM05D004599 ORTHO05D005564 8.3e-14 79.7 43 81.4
Glyma.20G081500 Glycine max HOM05D004599 ORTHO05D005564 8.3e-14 79.7 43 81.4
Phvul.007G232800 Phaseolus vulgaris HOM05D004599 ORTHO05D005564 8.3e-14 79.7 43 81.4
ClCG11G000260 Citrullus lanatus HOM05D004599 ORTHO05D005564 1.1e-13 79.3 43 83.7
Duzib151G0579 Durio zibethinus HOM05D004599 ORTHO05D005564 1.1e-13 79.3 43 83.7
Duzib212G0332 Durio zibethinus HOM05D004599 ORTHO05D005564 1.1e-13 79.3 43 83.7
PGR004G1602 Punica granatum HOM05D004599 ORTHO05D005564 1.1e-13 79.3 42 85.7
Thecc.04G218800 Theobroma cacao HOM05D004599 ORTHO05D005564 1.1e-13 79.3 43 83.7
ATR0088G024 Amborella trichopoda HOM05D004599 ORTHO05D005564 1.4e-13 79.0 42 83.3
ECA233G3541 Erigeron canadensis HOM05D004599 ORTHO05D005564 1.4e-13 79.0 43 81.4
Gohir.D02G032700 Gossypium hirsutum HOM05D004599 ORTHO05D005564 1.4e-13 79.0 42 88.1
Gorai.005G036100 Gossypium raimondii HOM05D004599 ORTHO05D005564 1.4e-13 79.0 42 88.1
Lalb_Chr03g0036871 Lupinus albus HOM05D004599 ORTHO05D005564 1.4e-13 79.0 42 85.7
Sed0004443 Sechium edule HOM05D004599 ORTHO05D005564 1.4e-13 79.0 42 85.7
Dinv27138 Davidia involucrata HOM05D004599 ORTHO05D005564 1.9e-13 78.6 43 83.7
CAN.G812.39 Capsicum annuum HOM05D004599 ORTHO05D005564 2.4e-13 78.2 43 83.7
Lj6g0015914 Lotus japonicus HOM05D004599 ORTHO05D005564 2.4e-13 78.2 42 81.0
Nitab4.5_0000451g0060 Nicotiana tabacum HOM05D004599 ORTHO05D005564 2.4e-13 78.2 43 83.7
Nitab4.5_0000867g0040 Nicotiana tabacum HOM05D004599 ORTHO05D005564 2.4e-13 78.2 43 83.7
Sopen09g034030 Solanum pennellii HOM05D004599 ORTHO05D005564 2.4e-13 78.2 43 83.7
PGSC0003DMG401001548 Solanum tuberosum HOM05D004599 ORTHO05D005564 2.4e-13 78.2 43 83.7
PGSC0003DMG402001548 Solanum tuberosum HOM05D004599 ORTHO05D005564 2.4e-13 78.2 43 83.7
Atru.chr4.1871 Acer truncatum HOM05D004599 ORTHO05D005564 3.2e-13 77.8 42 85.7
Ca_26211_v3 Cicer arietinum L. HOM05D004599 ORTHO05D005564 3.2e-13 77.8 43 79.1
Eucgr.E02123 Eucalyptus grandis HOM05D004599 ORTHO05D005564 3.2e-13 77.8 43 81.4
Eucgr.H03725 Eucalyptus grandis HOM05D004599 ORTHO05D005564 3.2e-13 77.8 43 81.4
Sabra10G0044000 Salix brachista HOM05D004599 ORTHO05D005564 3.2e-13 77.8 43 81.4
Oeu007538.2 Olea europaea HOM05D004599 ORTHO05D005564 4.1e-13 77.4 42 85.7
PSO832G1760 Papaver somniferum HOM05D004599 ORTHO05D005564 4.1e-13 77.4 43 79.1
Prupe.1G054000 Prunus persica HOM05D004599 ORTHO05D005564 4.1e-13 77.4 43 81.4
VMungo0720G2025 Vigna mungo HOM05D004599 ORTHO05D005564 4.1e-13 77.4 42 81.0
DCAR_024304 Daucus carota HOM05D004599 ORTHO05D005564 5.4e-13 77.0 42 83.3
Migut.O00257 Erythranthe guttata HOM05D004599 ORTHO05D005564 5.4e-13 77.0 43 81.4
MBI07_g15426_MAGBIO Magnolia biondii HOM05D004599 ORTHO05D005564 5.4e-13 77.0 43 81.4
vmacro00526 Vaccinium macrocarpon HOM05D004599 ORTHO05D005564 5.4e-13 77.0 43 81.4
Aa31LG9G4110 Aethionema arabicum HOM05D004599 ORTHO05D005564 7.1e-13 76.6 43 83.7
CARHR219180 Cardamine hirsuta HOM05D004599 ORTHO05D005564 7.1e-13 76.6 43 81.4
Haze_05800 Corylus avellana HOM05D000132 ORTHO05D000058 7.1e-13 76.6 43 79.1
Medtr1g045930 Medicago truncatula HOM05D004599 ORTHO05D005564 7.1e-13 76.6 43 79.1
Peaxi162Scf00125g01025 Petunia axillaris HOM05D004599 ORTHO05D005564 7.1e-13 76.6 43 79.1
Sp7g11150 Schrenkiella parvula HOM05D004599 ORTHO05D005564 7.1e-13 76.6 43 83.7
Zm00001eb426320 Zea mays HOM05D004599 ORTHO05D005564 7.1e-13 76.6 43 76.7
AL7G43140 Arabidopsis lyrata HOM05D004599 ORTHO05D005564 9.2e-13 76.3 43 81.4
AT4G13550 Arabidopsis thaliana HOM05D004599 ORTHO05D005564 9.2e-13 76.3 43 81.4
Carub.0007s2899 Capsella rubella HOM05D004599 ORTHO05D005564 9.2e-13 76.3 43 81.4
Thhalv10024569m.g Eutrema salsugineum HOM05D004599 ORTHO05D005564 9.2e-13 76.3 42 85.7
HanXRQChr07g0185811 Helianthus annuus HOM05D004599 ORTHO05D005564 9.2e-13 76.3 43 79.1
BcaB03g16085 Brassica carinata HOM05D004599 ORTHO05D005564 1.2e-12 75.9 43 81.4
A04p08630 Brassica napus HOM05D004599 ORTHO05D005564 1.6e-12 75.5 43 79.1
BraA04t16557Z Brassica rapa HOM05D004599 ORTHO05D005564 1.6e-12 75.5 43 79.1
Cc03_g06960 Coffea canephora HOM05D004599 ORTHO05D005564 1.6e-12 75.5 43 76.7
BcaC02g09417 Brassica carinata HOM05D004599 ORTHO05D005564 2.1e-12 75.1 43 76.7
C04p42390 Brassica napus HOM05D004599 ORTHO05D005564 2.1e-12 75.1 43 76.7
BolC4t25820H Brassica oleracea HOM05D004599 ORTHO05D005564 2.1e-12 75.1 43 76.7
SalBow2G1411 Salvia bowleyana HOM05D004599 ORTHO05D005564 2.1e-12 75.1 42 81.0
TPR.G23991 Trifolium pratense HOM05D004599 ORTHO05D005564 2.7e-12 74.7 43 76.7
Hma1.2p1_1076F.1_g254550 Hydrangea macrophylla HOM05D004599 ORTHO05D005564 3.5e-12 74.3 43 76.7
Hma1.2p1_1076F.1_g254560 Hydrangea macrophylla HOM05D004599 ORTHO05D005564 3.5e-12 74.3 43 76.7
CDE05G0981 Ceratophyllum demersum HOM05D004599 ORTHO05D005564 4.6e-12 73.9 42 76.2
TAR365G0001 Trochodendron aralioides HOM05D004599 ORTHO05D005564 4.6e-12 73.9 43 81.4
CSS0038132 Camellia sinensis var. sinensis HOM05D004599 ORTHO05D005564 7.8e-12 73.2 42 78.6
Pp3c16_6180 Physcomitrium patens HOM05D004599 ORTHO05D005564 2.3e-11 71.6 51 62.7
HPP92_012645 Vanilla planifolia HOM05D004599 ORTHO05D005564 3.0e-11 71.2 43 69.8
SMO358G0364 Selaginella moellendorffii HOM05D004599 ORTHO05D005564 6.6e-11 70.1 42 71.4
Potri.008G174300 Populus trichocarpa HOM05D004599 ORTHO05D005564 1.2e-09 65.9 43 65.1
Mapoly0081s0062 Marchantia polymorpha HOM05D004599 ORTHO05D005564 1.4e-08 62.4 42 61.9


User provided reference genes

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