Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g074980 Amaranthus hybridus HOM05D004599 ORTHO05D005564 2.1e-154 548.9 260 100.0
AUR62035344 Chenopodium quinoa HOM05D004599 ORTHO05D005564 6.9e-73 278.1 275 55.6
Sc19g0005730 Simmondsia chinensis HOM05D004599 ORTHO05D005564 2.3e-68 263.1 215 60.9
Gohir.D02G032700 Gossypium hirsutum HOM05D004599 ORTHO05D005564 1.3e-66 257.3 201 62.7
COL.COLO4_07140 Corchorus olitorius HOM05D004599 ORTHO05D005564 1.1e-65 254.2 212 59.9
PGR004G1602 Punica granatum HOM05D004599 ORTHO05D005564 2.0e-64 250.0 215 57.2
Hund19266 Selenicereus undatus HOM05D004599 ORTHO05D005564 2.6e-64 249.6 256 52.0
VMungo0720G2025 Vigna mungo HOM05D004599 ORTHO05D005564 1.3e-63 247.3 209 58.9
Gorai.005G036200 Gossypium raimondii HOM05D004599 ORTHO05D005564 6.5e-63 245.0 211 57.8
Gohir.A02G025500 Gossypium hirsutum HOM05D004599 ORTHO05D005564 8.5e-63 244.6 197 60.9
Phvul.007G232800 Phaseolus vulgaris HOM05D004599 ORTHO05D005564 2.5e-62 243.0 249 51.4
Prupe.1G054000 Prunus persica HOM05D004599 ORTHO05D005564 2.5e-62 243.0 211 57.3
FvH4_4g05250 Fragaria vesca HOM05D004599 ORTHO05D005564 1.2e-61 240.7 216 56.5
FAN12G1799 Fragaria x ananassa HOM05D004599 ORTHO05D005564 1.2e-61 240.7 216 56.5
Glyma.20G081500 Glycine max HOM05D004599 ORTHO05D005564 1.2e-61 240.7 209 57.4
Ciclev10004289m.g Citrus clementina HOM05D004599 ORTHO05D005564 2.1e-61 240.0 207 57.5
Duzib212G0332 Durio zibethinus HOM05D004599 ORTHO05D005564 2.1e-61 240.0 198 58.6
CANSAT78G2223 Cannabis sativa HOM05D004599 ORTHO05D005564 4.6e-61 238.8 212 56.1
FAN07G1323 Fragaria x ananassa HOM05D004599 ORTHO05D005564 4.6e-61 238.8 216 56.5
Glyma.10G130800 Glycine max HOM05D004599 ORTHO05D005564 6.1e-61 238.4 221 54.8
Lj6g0015914 Lotus japonicus HOM05D004599 ORTHO05D005564 6.1e-61 238.4 209 57.4
Potri.010G062700 Populus trichocarpa HOM05D004599 ORTHO05D005564 6.1e-61 238.4 215 56.7
TWI09G0954 Tripterygium wilfordii HOM05D004599 ORTHO05D005564 6.1e-61 238.4 267 49.4
FAN17G0126 Fragaria x ananassa HOM05D004599 ORTHO05D005564 1.4e-60 237.3 216 55.6
MD13G1226600 Malus domestica HOM05D004599 ORTHO05D005564 1.4e-60 237.3 212 54.7
Atru.chr4.1870 Acer truncatum HOM05D004599 ORTHO05D005564 2.3e-60 236.5 208 56.2
Eucgr.H02878 Eucalyptus grandis HOM05D004599 ORTHO05D005564 2.3e-60 236.5 212 56.6
ClCG11G000260 Citrullus lanatus HOM05D004599 ORTHO05D005564 3.0e-60 236.1 228 52.6
RcHm_v2.0_Chr4g0396161 Rosa chinensis HOM05D004599 ORTHO05D005564 1.1e-59 234.2 213 55.9
PSO832G1760 Papaver somniferum HOM05D004599 ORTHO05D005564 1.5e-59 233.8 208 54.3
BcaB03g16085 Brassica carinata HOM05D004599 ORTHO05D005564 2.6e-59 233.0 198 55.6
Sp7g11150 Schrenkiella parvula HOM05D004599 ORTHO05D005564 2.6e-59 233.0 198 56.6
BcaC02g09417 Brassica carinata HOM05D004599 ORTHO05D005564 5.7e-59 231.9 198 54.5
Nn1g03051 Nelumbo nucifera HOM05D004599 ORTHO05D005564 7.4e-59 231.5 208 53.8
FAN22G0163 Fragaria x ananassa HOM05D004599 ORTHO05D005564 9.7e-59 231.1 221 54.3
Hma1.2p1_1076F.1_g254540 Hydrangea macrophylla HOM05D004599 ORTHO05D005564 1.3e-58 230.7 198 57.6
Cfa014829 Carpinus fangiana HOM05D004599 ORTHO05D005564 2.2e-58 229.9 197 57.9
CiPaw.01G175100 Carya illinoinensis HOM05D004599 ORTHO05D005564 2.2e-58 229.9 196 58.7
Cc03_g06960 Coffea canephora HOM05D004599 ORTHO05D005564 2.8e-58 229.6 198 57.1
MELO3C022936.2 Cucumis melo HOM05D004599 ORTHO05D005564 2.8e-58 229.6 197 57.9
AL7G43140 Arabidopsis lyrata HOM05D004599 ORTHO05D005564 6.3e-58 228.4 206 53.4
AT4G13550 Arabidopsis thaliana HOM05D004599 ORTHO05D005564 6.3e-58 228.4 212 52.4
Carub.0007s2899 Capsella rubella HOM05D004599 ORTHO05D005564 6.3e-58 228.4 212 53.3
Sabra10G0044000 Salix brachista HOM05D004599 ORTHO05D005564 6.3e-58 228.4 258 48.1
arahy.Tifrunner.gnm1.ann1.7X6UW5 Arachis hypogaea HOM05D004599 ORTHO05D005564 1.1e-57 227.6 208 53.8
Ca_26211_v3 Cicer arietinum L. HOM05D004599 ORTHO05D005564 1.4e-57 227.3 208 55.8
Nitab4.5_0000451g0060 Nicotiana tabacum HOM05D004599 ORTHO05D005564 1.4e-57 227.3 197 57.4
Sopen09g034030 Solanum pennellii HOM05D004599 ORTHO05D005564 1.4e-57 227.3 215 54.4
Manes.03G155700 Manihot esculenta HOM05D004599 ORTHO05D005564 2.4e-57 226.5 208 55.3
Nitab4.5_0000867g0040 Nicotiana tabacum HOM05D004599 ORTHO05D005564 2.4e-57 226.5 197 56.9
Migut.O00257 Erythranthe guttata HOM05D004599 ORTHO05D005564 3.1e-57 226.1 213 54.9
Solyc09g091050.4 Solanum lycopersicum HOM05D004599 ORTHO05D005564 3.1e-57 226.1 215 54.0
BraA04t16557Z Brassica rapa HOM05D004599 ORTHO05D005564 5.3e-57 225.3 214 51.9
Oeu008817.2 Olea europaea HOM05D004599 ORTHO05D005564 6.9e-57 224.9 196 56.6
A04p08630 Brassica napus HOM05D004599 ORTHO05D005564 9.1e-57 224.6 214 51.9
Peaxi162Scf00125g01026 Petunia axillaris HOM05D004599 ORTHO05D005564 9.1e-57 224.6 197 55.8
TPR.G23991 Trifolium pratense HOM05D004599 ORTHO05D005564 9.1e-57 224.6 197 57.9
BolC4t25820H Brassica oleracea HOM05D004599 ORTHO05D005564 1.5e-56 223.8 211 52.1
CsaV3_5G015660 Cucumis sativus L. HOM05D004599 ORTHO05D005564 2.0e-56 223.4 194 57.2
Actinidia25094 Actinidia chinensis HOM05D004599 ORTHO05D005564 2.6e-56 223.0 199 55.3
Lsat_1_v5_gn_6_67861 Lactuca sativa HOM05D004599 ORTHO05D005564 2.6e-56 223.0 200 55.0
MBI07_g14440_MAGBIO Magnolia biondii HOM05D004599 ORTHO05D005564 2.6e-56 223.0 197 54.3
C04p42390 Brassica napus HOM05D004599 ORTHO05D005564 4.5e-56 222.2 198 53.5
HanXRQChr07g0185811 Helianthus annuus HOM05D004599 ORTHO05D005564 5.9e-56 221.9 201 54.7
CAN.G812.39 Capsicum annuum HOM05D004599 ORTHO05D005564 7.7e-56 221.5 215 53.0
DCAR_024304 Daucus carota HOM05D004599 ORTHO05D005564 7.7e-56 221.5 207 53.6
ATR0088G024 Amborella trichopoda HOM05D004599 ORTHO05D005564 1.0e-55 221.1 196 54.6
Psat0s3917g0040 Pisum sativum HOM05D004599 ORTHO05D005564 3.8e-55 219.2 197 55.8
Lalb_Chr03g0036871 Lupinus albus HOM05D004599 ORTHO05D005564 5.0e-55 218.8 209 49.8
unitig_32.g10859 Utricularia gibba HOM05D004599 ORTHO05D005564 1.4e-54 217.2 233 49.4
Actinidia35930 Actinidia chinensis HOM05D004599 ORTHO05D005564 3.2e-54 216.1 199 54.8
CDE05G1179 Ceratophyllum demersum HOM05D004599 ORTHO05D005564 4.2e-54 215.7 207 51.7
Aqoxy5G00088 Aquilegia oxysepala HOM05D004599 ORTHO05D005564 9.4e-54 214.5 201 52.2
Medtr1g045930 Medicago truncatula HOM05D004599 ORTHO05D005564 2.1e-53 213.4 197 55.3
ECA233G3541 Erigeron canadensis HOM05D004599 ORTHO05D005564 1.0e-52 211.1 202 51.0
Os04g0509100 Oryza sativa ssp. japonica HOM05D004599 ORTHO05D005564 1.8e-52 210.3 199 51.3
Psat0s2340g0040 Pisum sativum HOM05D004599 ORTHO05D005564 5.2e-52 208.8 197 52.8
Zm00001eb426320 Zea mays HOM05D004599 ORTHO05D005564 4.8e-50 202.2 196 49.5
Duzib151G0579 Durio zibethinus HOM05D004599 ORTHO05D005564 5.9e-48 195.3 173 56.1
SGA_v2.0_scaffold155G37242 Striga asiatica HOM05D004599 ORTHO05D005564 5.0e-47 192.2 206 47.1
HPP92_012645 Vanilla planifolia HOM05D004599 ORTHO05D005564 9.4e-46 188.0 197 45.7
EL10Ac3g06728 Beta vulgaris HOM05D004599 ORTHO05D005564 1.7e-42 177.2 191 52.4
Pp3c16_6180 Physcomitrium patens HOM05D004599 ORTHO05D005564 6.3e-42 175.3 196 43.9
Lj3A633T11 Lonicera japonica HOM05D004599 ORTHO05D005564 7.0e-41 171.8 100 78.0
AUR62035896 Chenopodium quinoa HOM05D004599 ORTHO05D005564 2.2e-39 166.8 275 40.4
Mapoly0081s0062 Marchantia polymorpha HOM05D004599 ORTHO05D005564 2.5e-38 163.3 199 39.2
Haze_11510 Corylus avellana HOM05D004599 ORTHO05D005564 7.2e-38 161.8 97 77.3
SalBow2G1411 Salvia bowleyana HOM05D004599 ORTHO05D005564 1.6e-37 160.6 197 44.2
SMO358G0364 Selaginella moellendorffii HOM05D004599 ORTHO05D005564 1.8e-36 157.1 191 41.4
Thecc.04G218800 Theobroma cacao HOM05D004599 ORTHO05D005564 5.0e-31 139.0 213 39.9
Hma1.2p1_1076F.1_g254550 Hydrangea macrophylla HOM05D004599 ORTHO05D005564 3.6e-29 132.9 135 48.9
GSVIVG01001864001 Vitis vinifera HOM05D004599 ORTHO05D005564 7.5e-27 125.2 127 49.6
Dinv27138 Davidia involucrata HOM05D004599 ORTHO05D005564 3.7e-26 122.9 128 47.7
Haze_11505 Corylus avellana HOM05D000132 ORTHO05D000058 1.6e-21 107.5 126 46.0
TAR365G0001 Trochodendron aralioides HOM05D004599 ORTHO05D005564 3.6e-21 106.3 123 44.7
Aa31LG9G4100 Aethionema arabicum HOM05D004599 ORTHO05D005564 3.4e-19 99.8 100 49.0
SEGI_35296 Sequoiadendron giganteum HOM05D004599 ORTHO05D005564 4.6e-16 89.4 123 39.0
MCO03G582 Micromonas commoda HOM05D004599 ORTHO05D005564 1.0e-15 88.2 104 43.3
CSS0023500 Camellia sinensis var. sinensis HOM05D004599 ORTHO05D005564 3.9e-15 86.3 59 66.1
CARHR219180 Cardamine hirsuta HOM05D004599 ORTHO05D005564 5.0e-15 85.9 116 37.1
Sed0019400 Sechium edule HOM05D004599 ORTHO05D005564 1.5e-14 84.3 53 73.6
CARHR219190 Cardamine hirsuta HOM05D004599 ORTHO05D005564 7.3e-14 82.0 61 60.7
Cre01.g002451 Chlamydomonas reinhardtii HOM05D004599 ORTHO05D005564 8.9e-12 75.1 142 33.1
Sed0004443 Sechium edule HOM05D004599 ORTHO05D005564 3.4e-11 73.2 116 36.2
Thhalv10024569m.g Eutrema salsugineum HOM05D004599 ORTHO05D005564 2.9e-10 70.1 112 33.9
Potri.008G174300 Populus trichocarpa HOM05D004599 ORTHO05D005564 5.4e-09 65.9 100 37.0
EL10Ac3g06729 Beta vulgaris HOM05D004599 ORTHO05D005564 6.0e-08 62.4 30 83.3
vmacro00526 Vaccinium macrocarpon HOM05D004599 ORTHO05D005564 8.6e-07 58.5 32 75.0
Lj1g0002807 Lotus japonicus HOM05D002176 ORTHO05D002598 1.9e-06 57.4 98 30.6
Eucgr.H03725 Eucalyptus grandis HOM05D004599 ORTHO05D005564 3.3e-06 56.6 92 38.0
Aqoxy5G03761 Aquilegia oxysepala HOM05D002176 ORTHO05D002598 4.3e-06 56.2 100 30.0
Rhsim09G0044400 Rhododendron simsii HOM05D004599 ORTHO05D005564 4.3e-06 56.2 31 74.2
Oeu007542.1 Olea europaea HOM05D004599 ORTHO05D005564 9.5e-06 55.1 25 96.0


User provided reference genes

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