Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 4.6e-70 268.1 166 100.0
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 1.0e-37 160.6 140 70.7
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 4.3e-36 155.2 140 63.6
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 3.0e-29 132.5 125 59.2
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 1.1e-28 130.6 125 60.8
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.7e-28 128.3 126 57.9
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.7e-28 128.3 126 57.9
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 1.6e-27 126.7 126 57.9
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 1.6e-27 126.7 138 52.2
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 2.1e-27 126.3 139 51.1
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.1e-27 126.3 140 56.4
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 2.1e-27 126.3 140 56.4
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 2.8e-27 125.9 140 53.6
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 2.8e-27 125.9 138 53.6
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 3.7e-27 125.6 139 53.2
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 3.7e-27 125.6 134 56.0
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 3.7e-27 125.6 140 52.9
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 4.8e-27 125.2 139 49.6
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 4.8e-27 125.2 125 55.2
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 6.2e-27 124.8 93 68.8
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.1e-26 124.0 138 52.9
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 1.1e-26 124.0 125 56.0
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.8e-26 123.2 141 53.9
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.0e-26 122.1 143 51.7
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 4.0e-26 122.1 134 51.5
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 5.3e-26 121.7 101 62.4
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 5.3e-26 121.7 140 51.4
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 6.9e-26 121.3 126 54.8
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 6.9e-26 121.3 126 54.8
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 1.2e-25 120.6 126 58.7
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.2e-25 120.6 143 51.0
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 1.2e-25 120.6 142 51.4
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 1.2e-25 120.6 141 51.1
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 1.5e-25 120.2 157 51.0
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 1.5e-25 120.2 126 54.8
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 2.0e-25 119.8 139 51.1
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 2.6e-25 119.4 123 52.8
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 3.4e-25 119.0 127 54.3
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 3.4e-25 119.0 139 51.8
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 4.5e-25 118.6 124 54.0
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 4.5e-25 118.6 141 51.1
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 4.5e-25 118.6 141 51.1
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 5.8e-25 118.2 124 54.0
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 5.8e-25 118.2 124 54.0
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 5.8e-25 118.2 135 49.6
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 7.6e-25 117.9 133 54.1
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 1.0e-24 117.5 139 48.9
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 1.3e-24 117.1 124 53.2
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 1.3e-24 117.1 124 53.2
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.3e-24 117.1 124 53.2
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 1.3e-24 117.1 118 57.6
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 1.3e-24 117.1 123 54.5
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 1.3e-24 117.1 130 51.5
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 1.3e-24 117.1 126 56.3
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 1.7e-24 116.7 145 53.1
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 1.7e-24 116.7 142 51.4
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 1.7e-24 116.7 124 52.4
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.7e-24 116.7 137 50.4
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 2.2e-24 116.3 122 53.3
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 2.2e-24 116.3 123 54.5
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.2e-24 116.3 123 52.8
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 2.2e-24 116.3 125 55.2
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 2.2e-24 116.3 85 69.4
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 2.9e-24 115.9 125 53.6
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 3.8e-24 115.5 124 50.8
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 3.8e-24 115.5 125 53.6
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 3.8e-24 115.5 140 49.3
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 5.0e-24 115.2 125 52.8
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 5.0e-24 115.2 124 51.6
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 5.0e-24 115.2 85 65.9
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 5.0e-24 115.2 142 47.2
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 5.0e-24 115.2 142 47.2
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 6.5e-24 114.8 85 68.2
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 8.4e-24 114.4 124 51.6
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 8.4e-24 114.4 140 49.3
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 8.4e-24 114.4 126 54.0
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 8.4e-24 114.4 131 47.3
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 1.1e-23 114.0 85 64.7
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 1.1e-23 114.0 125 52.8
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.4e-23 113.6 142 47.2
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 1.9e-23 113.2 129 50.4
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 1.9e-23 113.2 121 52.1
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.9e-23 113.2 140 48.6
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 2.5e-23 112.8 121 53.7
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 2.5e-23 112.8 83 69.9
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 3.2e-23 112.5 123 52.8
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 4.2e-23 112.1 140 46.4
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 4.2e-23 112.1 140 48.6
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 7.1e-23 111.3 121 52.9
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 1.2e-22 110.5 124 50.0
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.2e-22 110.5 86 66.3
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 1.6e-22 110.2 141 48.2
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 3.5e-22 109.0 139 49.6
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 6.1e-22 108.2 141 48.2
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.0e-21 107.5 87 62.1
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 1.0e-21 107.5 85 62.4
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 1.3e-21 107.1 124 50.0
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 1.8e-21 106.7 141 47.5
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 1.8e-21 106.7 141 44.7
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 2.3e-21 106.3 126 53.2
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 5.1e-21 105.1 141 46.8
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 1.1e-20 104.0 140 46.4
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 1.3e-19 100.5 127 49.6
AUR62040384 Chenopodium quinoa HOM05D006881 ORTHO05D008423 5.3e-18 95.1 49 91.8
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 2.6e-17 92.8 85 60.0
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 4.5e-17 92.0 140 40.0
CDE02G3907 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 7.7e-17 91.3 84 58.3
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 5.0e-16 88.6 125 41.6
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.4e-15 87.0 125 44.8
TWI73G0635 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 4.6e-14 82.0 105 47.6
CBR_g46646 Chara braunii HOM05D006881 ORTHO05D008423 1.8e-13 80.1 97 46.4
AagrBONN_evm.TU.Sc2ySwM_228.1971 Anthoceros agrestis HOM05D006881 ORTHO05D008423 4.3e-12 75.5 93 44.1
BcaC04g18670 Brassica carinata HOM05D006881 ORTHO05D008423 7.4e-12 74.7 71 53.5
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.2e-11 73.2 57 63.2
C09p57950 Brassica napus HOM05D006881 ORTHO05D008423 5.9e-09 65.1 44 65.9
BolC9t58662H Brassica oleracea HOM05D006881 ORTHO05D008423 5.9e-09 65.1 44 65.9


User provided reference genes

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