Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g074520 Amaranthus hybridus HOM05D005247 ORTHO05D006571 1.1e-223 779.6 392 100.0
EL10Ac3g06569 Beta vulgaris HOM05D005247 ORTHO05D006571 3.3e-151 538.9 397 69.5
AUR62040732 Chenopodium quinoa HOM05D005247 ORTHO05D006571 1.8e-149 533.1 392 71.4
AUR62043783 Chenopodium quinoa HOM05D005247 ORTHO05D006571 5.1e-144 515.0 391 69.3
Sc13g0003580 Simmondsia chinensis HOM05D005247 ORTHO05D006571 9.3e-130 467.6 401 59.1
Prupe.1G141100 Prunus persica HOM05D005247 ORTHO05D006571 4.8e-118 428.7 399 54.9
QL06p007567 Quercus lobata HOM05D005247 ORTHO05D006571 1.3e-115 420.6 307 63.8
MD13G1173000 Malus domestica HOM05D005247 ORTHO05D006571 7.9e-113 411.4 400 52.2
Phvul.003G101400 Phaseolus vulgaris HOM05D005247 ORTHO05D006571 1.8e-112 410.2 306 62.4
MD16G1174400 Malus domestica HOM05D005247 ORTHO05D006571 3.0e-112 409.5 397 53.1
CiPaw.02G086000 Carya illinoinensis HOM05D005247 ORTHO05D006571 3.9e-112 409.1 307 61.2
Nn7g38324 Nelumbo nucifera HOM05D005247 ORTHO05D006571 1.5e-111 407.1 406 51.5
Actinidia23422 Actinidia chinensis HOM05D005247 ORTHO05D006571 1.9e-111 406.8 317 59.9
CSS0036429 Camellia sinensis var. sinensis HOM05D005247 ORTHO05D006571 1.9e-111 406.8 404 51.7
BcaB06g26247 Brassica carinata HOM05D005247 ORTHO05D006571 2.5e-111 406.4 336 57.1
Cfa015350 Carpinus fangiana HOM05D005247 ORTHO05D006571 2.5e-111 406.4 304 62.2
THA.LOC104802559 Tarenaya hassleriana HOM05D005247 ORTHO05D006571 3.3e-111 406.0 358 55.3
Lalb_Chr12g0196461 Lupinus albus HOM05D005247 ORTHO05D006571 7.4e-111 404.8 306 61.1
Sp3g19500 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.3e-110 404.1 309 60.2
Cc03_g02260 Coffea canephora HOM05D005247 ORTHO05D006571 2.8e-110 402.9 312 61.5
Duzib151G0039 Durio zibethinus HOM05D005247 ORTHO05D006571 6.3e-110 401.7 378 55.3
RcHm_v2.0_Chr4g0421281 Rosa chinensis HOM05D005247 ORTHO05D006571 6.3e-110 401.7 308 63.0
VMungo1215G2055 Vigna mungo HOM05D005247 ORTHO05D006571 1.1e-109 401.0 306 61.8
Rhsim04G0216900 Rhododendron simsii HOM05D005247 ORTHO05D006571 1.8e-109 400.2 300 60.7
AL3G35540 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 2.4e-109 399.8 371 53.4
CANSAT78G0941 Cannabis sativa HOM05D005247 ORTHO05D006571 2.4e-109 399.8 400 52.2
AT3G21465 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 5.3e-109 398.7 343 55.4
BcaC05g28162 Brassica carinata HOM05D005247 ORTHO05D006571 5.3e-109 398.7 309 59.9
C05p41980 Brassica napus HOM05D005247 ORTHO05D006571 5.3e-109 398.7 309 59.9
BolC5t32932H Brassica oleracea HOM05D005247 ORTHO05D006571 6.9e-109 398.3 350 54.9
Hma1.2p1_0078F.1_g040780 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 6.9e-109 398.3 300 60.0
AT4G15640 Arabidopsis thaliana HOM05D005247 ORTHO05D006571 9.0e-109 397.9 392 51.5
TAR362G0112 Trochodendron aralioides HOM05D005247 ORTHO05D006571 9.0e-109 397.9 401 53.1
Atru.chr4.2766 Acer truncatum HOM05D005247 ORTHO05D006571 1.5e-108 397.1 406 51.2
Solyc07g041930.3 Solanum lycopersicum HOM05D005247 ORTHO05D006571 1.5e-108 397.1 309 60.5
Glyma.07G251000 Glycine max HOM05D005247 ORTHO05D006571 2.0e-108 396.7 303 61.7
A05p27200 Brassica napus HOM05D005247 ORTHO05D006571 3.4e-108 396.0 309 59.2
Glyma.17G023300 Glycine max HOM05D005247 ORTHO05D006571 3.4e-108 396.0 328 58.5
Carub.0007s2616 Capsella rubella HOM05D005247 ORTHO05D006571 4.5e-108 395.6 365 52.9
AL7G39790 Arabidopsis lyrata HOM05D005247 ORTHO05D006571 7.6e-108 394.8 309 58.9
Potri.008G205300 Populus trichocarpa HOM05D005247 ORTHO05D006571 7.6e-108 394.8 306 58.8
BraA05t21609Z Brassica rapa HOM05D005247 ORTHO05D006571 1.3e-107 394.0 306 59.5
Sp7g13890 Schrenkiella parvula HOM05D005247 ORTHO05D006571 1.3e-107 394.0 392 51.8
Carub.0003s2149 Capsella rubella HOM05D005247 ORTHO05D006571 2.2e-107 393.3 315 57.5
Manes.15G016200 Manihot esculenta HOM05D005247 ORTHO05D006571 2.9e-107 392.9 316 60.1
GSVIVG01017794001 Vitis vinifera HOM05D005247 ORTHO05D006571 3.8e-107 392.5 309 59.2
PSO541G1846 Papaver somniferum HOM05D005247 ORTHO05D006571 5.0e-107 392.1 357 56.3
Eucgr.H03774 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.5e-107 391.7 302 61.6
FAN07G0437 Fragaria x ananassa HOM05D005247 ORTHO05D006571 6.5e-107 391.7 315 61.3
Gohir.A09G233900 Gossypium hirsutum HOM05D005247 ORTHO05D006571 1.1e-106 391.0 392 52.0
Sopen07g021430 Solanum pennellii HOM05D005247 ORTHO05D006571 1.1e-106 391.0 309 59.5
TPR.G28788 Trifolium pratense HOM05D005247 ORTHO05D006571 1.1e-106 391.0 304 58.6
Aa31LG9G1800 Aethionema arabicum HOM05D005247 ORTHO05D006571 1.4e-106 390.6 395 50.6
Ciclev10005079m.g Citrus clementina HOM05D005247 ORTHO05D006571 2.5e-106 389.8 292 63.0
Psat5g125320 Pisum sativum HOM05D005247 ORTHO05D006571 3.2e-106 389.4 304 58.2
FvH4_4g17340 Fragaria vesca HOM05D005247 ORTHO05D006571 7.2e-106 388.3 316 61.1
MSTRG.21809 Avicennia marina HOM05D005247 ORTHO05D006571 9.3e-106 387.9 340 54.1
Lsat_1_v5_gn_4_34220 Lactuca sativa HOM05D005247 ORTHO05D006571 1.2e-105 387.5 307 59.9
CAN.G311.32 Capsicum annuum HOM05D005247 ORTHO05D006571 1.6e-105 387.1 300 60.0
Ca_21545_v3 Cicer arietinum L. HOM05D005247 ORTHO05D006571 1.6e-105 387.1 392 50.8
CARHR290040 Cardamine hirsuta HOM05D005247 ORTHO05D006571 2.1e-105 386.7 309 57.6
Nitab4.5_0006478g0050 Nicotiana tabacum HOM05D005247 ORTHO05D006571 3.6e-105 386.0 309 57.6
Lj4g0024405 Lotus japonicus HOM05D005247 ORTHO05D006571 6.1e-105 385.2 388 51.5
PGR142G1936 Punica granatum HOM05D005247 ORTHO05D006571 6.1e-105 385.2 324 56.2
Thecc.04G278500 Theobroma cacao HOM05D005247 ORTHO05D006571 6.1e-105 385.2 304 58.9
Aqoxy5G00647 Aquilegia oxysepala HOM05D005247 ORTHO05D006571 7.9e-105 384.8 306 58.5
Medtr3g069790 Medicago truncatula HOM05D005247 ORTHO05D006571 1.0e-104 384.4 301 59.1
Nitab4.5_0001357g0080 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.3e-104 384.0 311 57.2
PSO675G0879 Papaver somniferum HOM05D005247 ORTHO05D006571 3.9e-104 382.5 356 54.8
ECA234G2791 Erigeron canadensis HOM05D005247 ORTHO05D006571 5.1e-104 382.1 328 55.2
FAN17G1560 Fragaria x ananassa HOM05D005247 ORTHO05D006571 5.1e-104 382.1 324 60.2
TWI09G0062 Tripterygium wilfordii HOM05D005247 ORTHO05D006571 8.7e-104 381.3 359 51.5
Nitab4.5_0009436g0020 Nicotiana tabacum HOM05D005247 ORTHO05D006571 1.1e-103 380.9 330 54.8
Thhalv10025397m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.9e-103 380.2 309 57.3
Peaxi162Scf00127g00146 Petunia axillaris HOM05D005247 ORTHO05D006571 1.9e-103 380.2 307 58.0
Gorai.006G257600 Gossypium raimondii HOM05D005247 ORTHO05D006571 2.5e-103 379.8 392 50.8
SGA_v2.0_scaffold89G27537 Striga asiatica HOM05D005247 ORTHO05D006571 1.3e-102 377.5 368 50.0
vmacro08197 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 4.8e-102 375.6 325 53.2
HanXRQChr17g0562111 Helianthus annuus HOM05D005247 ORTHO05D006571 1.4e-101 374.0 362 51.4
Thhalv10021000m.g Eutrema salsugineum HOM05D005247 ORTHO05D006571 1.8e-101 373.6 350 53.4
FAN12G4219 Fragaria x ananassa HOM05D005247 ORTHO05D006571 4.1e-101 372.5 342 56.7
DCAR_024549 Daucus carota HOM05D005247 ORTHO05D006571 2.0e-100 370.2 317 55.8
Gohir.D09G234700 Gossypium hirsutum HOM05D005247 ORTHO05D006571 4.5e-100 369.0 392 50.0
Cpa.g.sc16.124 Carica papaya HOM05D005247 ORTHO05D006571 2.2e-99 366.7 297 57.2
Nitab4.5_0000343g0170 Nicotiana tabacum HOM05D005247 ORTHO05D006571 5.0e-99 365.5 311 56.6
Migut.N00115 Erythranthe guttata HOM05D005247 ORTHO05D006571 8.5e-99 364.8 375 49.1
TPR.G29803 Trifolium pratense HOM05D005247 ORTHO05D006571 8.5e-99 364.8 297 55.9
Haze_01257 Corylus avellana HOM05D005247 ORTHO05D006571 5.5e-98 362.1 356 51.4
arahy.Tifrunner.gnm1.ann1.8Y06GW Arachis hypogaea HOM05D005247 ORTHO05D006571 1.6e-97 360.5 392 48.7
arahy.Tifrunner.gnm1.ann1.A4UT9N Arachis hypogaea HOM05D005247 ORTHO05D006571 2.1e-97 360.1 301 56.8
SGA_v2.0_scaffold175G39318 Striga asiatica HOM05D005247 ORTHO05D006571 6.3e-94 348.6 367 47.7
Os07g0668200 Oryza sativa ssp. japonica HOM05D005247 ORTHO05D006571 1.1e-93 347.8 367 47.4
FAN12G3211 Fragaria x ananassa HOM05D005247 ORTHO05D006571 2.4e-93 346.7 340 52.6
Sed0017520 Sechium edule HOM05D005247 ORTHO05D006571 2.2e-91 340.1 386 46.4
ClCG05G005860 Citrullus lanatus HOM05D005247 ORTHO05D006571 5.0e-91 339.0 298 54.7
CsaV3_3G014210 Cucumis sativus L. HOM05D005247 ORTHO05D006571 1.1e-90 337.8 315 51.7
unitig_748.g7195 Utricularia gibba HOM05D005247 ORTHO05D006571 5.5e-90 335.5 327 49.8
Dinv38319 Davidia involucrata HOM05D005247 ORTHO05D006571 1.4e-88 330.9 259 59.8
Zm00001eb330100 Zea mays HOM05D005247 ORTHO05D006571 5.2e-88 328.9 327 48.0
TAR633G1275 Trochodendron aralioides HOM05D005247 ORTHO05D006571 2.2e-86 323.6 325 52.0
ATR0706G238 Amborella trichopoda HOM05D005247 ORTHO05D006571 2.9e-83 313.2 304 49.7
Dinv44420 Davidia involucrata HOM05D005247 ORTHO05D006571 4.0e-80 302.8 236 58.9
Hund20585 Selenicereus undatus HOM05D005247 ORTHO05D006571 4.4e-79 299.3 273 58.2
BolC8t48291H Brassica oleracea HOM05D005247 ORTHO05D006571 1.3e-78 297.7 403 43.9
Hma1.2p1_3003F.1_g331535 Hydrangea macrophylla HOM05D005247 ORTHO05D006571 3.1e-77 293.1 308 49.0
BcaB04g18303 Brassica carinata HOM05D005247 ORTHO05D006571 1.1e-74 284.6 210 60.0
MELO3C006614.2 Cucumis melo HOM05D005247 ORTHO05D006571 1.0e-72 278.1 246 54.1
Eucgr.H03753 Eucalyptus grandis HOM05D005247 ORTHO05D006571 1.4e-72 277.7 229 58.5
vmacro08194 Vaccinium macrocarpon HOM05D005247 ORTHO05D006571 6.3e-70 268.9 255 50.2
Sabra08G0156600 Salix brachista HOM05D005247 ORTHO05D006571 5.0e-67 259.2 185 61.6
Atru.chr4.2761 Acer truncatum HOM05D005247 ORTHO05D006571 5.5e-66 255.8 282 47.9
COL.COLO4_13921 Corchorus olitorius HOM05D005247 ORTHO05D006571 5.5e-66 255.8 353 41.6
Psat4g226360 Pisum sativum HOM05D005247 ORTHO05D006571 9.2e-61 238.4 309 40.8
Lj6A670T87 Lonicera japonica HOM05D005247 ORTHO05D006571 6.6e-51 205.7 150 60.7
SHI00299 Sapria himalayana HOM05D005247 ORTHO05D000987 8.0e-49 198.7 271 40.6
RcHm_v2.0_Chr4g0421901 Rosa chinensis HOM05D005247 ORTHO05D006571 7.5e-47 192.2 187 51.9
BraA08t33173Z Brassica rapa HOM05D005247 ORTHO05D006571 8.1e-41 172.2 122 63.1
Eucgr.C02045 Eucalyptus grandis HOM05D005247 ORTHO05D006571 6.8e-40 169.1 132 61.4
Mapoly0002s0143 Marchantia polymorpha HOM05D005247 ORTHO05D006571 2.7e-36 157.1 304 30.6
Sabra08G0156700 Salix brachista HOM05D005247 ORTHO05D006571 8.6e-35 152.1 117 61.5
Pp3c14_15200 Physcomitrium patens HOM05D005247 ORTHO05D006571 1.9e-34 151.0 349 28.4
HPP92_013697 Vanilla planifolia HOM05D005247 ORTHO05D006571 2.1e-33 147.5 181 40.9
Psat5g177080 Pisum sativum HOM05D005247 ORTHO05D006571 9.2e-29 132.1 173 41.0
SEGI_33954 Sequoiadendron giganteum HOM05D005247 ORTHO05D000001 2.7e-28 130.6 148 45.3
CBR_g30222 Chara braunii HOM05D005247 ORTHO05D006571 8.1e-25 119.0 296 26.7
AagrBONN_evm.TU.Sc2ySwM_228.2885 Anthoceros agrestis HOM05D005247 ORTHO05D006571 1.2e-23 115.2 219 32.4
Psat6g103040 Pisum sativum HOM05D005247 ORTHO05D006571 9.9e-23 112.1 76 63.2
SMO202G0041 Selaginella moellendorffii HOM05D005247 ORTHO05D006571 1.7e-22 111.3 246 29.7
RcHm_v2.0_Chr4g0421891 Rosa chinensis HOM05D005247 ORTHO05D006571 4.9e-22 109.8 91 60.4
CAN.G640.20 Capsicum annuum HOM05D005247 ORTHO05D006571 1.2e-20 105.1 121 46.3
BcaC07g37894 Brassica carinata HOM05D005247 ORTHO05D006571 2.3e-19 100.9 143 40.6
Eucgr.F02603 Eucalyptus grandis HOM05D005247 ORTHO05D006571 3.9e-19 100.1 68 67.6
Eucgr.H03759 Eucalyptus grandis HOM05D005247 ORTHO05D006571 5.6e-18 96.3 103 49.5
Actinidia40231 Actinidia chinensis HOM05D005247 ORTHO05D006571 9.0e-16 89.0 91 48.4
Hund28065 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.9e-13 81.3 162 35.2
Hund28074 Selenicereus undatus HOM05D000003 ORTHO05D000006 1.9e-13 81.3 162 35.2
Pp3c14_7470 Physcomitrium patens HOM05D005247 ORTHO05D006571 2.1e-09 67.8 297 22.6
CAN.G640.21 Capsicum annuum HOM05D005247 ORTHO05D006571 2.8e-09 67.4 53 52.8
FAN22G1325 Fragaria x ananassa HOM05D005247 ORTHO05D006571 3.7e-09 67.0 70 51.4


User provided reference genes

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