Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g074090 Amaranthus hybridus HOM05D008368 ORTHO05D010489 1.8e-28 128.6 70 100.0
AUR62038060 Chenopodium quinoa HOM05D008368 ORTHO05D010489 2.4e-12 75.1 70 57.1
AUR62038186 Chenopodium quinoa HOM05D008368 ORTHO05D010489 2.0e-11 72.0 71 57.7
EL10Ac3g06405 Beta vulgaris HOM05D008368 ORTHO05D010489 2.1e-08 62.0 38 78.9
EL10Ac3g06406 Beta vulgaris HOM05D008368 ORTHO05D010489 2.1e-08 62.0 38 78.9
CiPaw.01G161200 Carya illinoinensis HOM05D008368 ORTHO05D010489 8.0e-08 60.1 37 73.0
Cc03_g03240 Coffea canephora HOM05D008368 ORTHO05D010489 1.8e-07 58.9 34 79.4
Actinidia08510 Actinidia chinensis HOM05D008368 ORTHO05D010489 2.3e-07 58.5 57 59.6
Sc13g0004110 Simmondsia chinensis HOM05D008368 ORTHO05D010489 2.3e-07 58.5 40 72.5
vmacro15316 Vaccinium macrocarpon HOM05D008368 ORTHO05D010489 2.3e-07 58.5 34 79.4
MD13G1185300 Malus domestica HOM05D008368 ORTHO05D010489 4.0e-07 57.8 36 72.2
FAN07G1534 Fragaria x ananassa HOM05D008368 ORTHO05D010489 5.2e-07 57.4 61 52.5
CSS0036726 Camellia sinensis var. sinensis HOM05D008368 ORTHO05D010489 6.7e-07 57.0 36 72.2
Medtr2g022540 Medicago truncatula HOM05D008368 ORTHO05D010489 8.8e-07 56.6 65 50.8
Os05g0532800 Oryza sativa ssp. japonica HOM05D038576 ORTHO05D010489 8.8e-07 56.6 36 69.4
unitig_32.g10803 Utricularia gibba HOM05D008368 ORTHO05D010489 2.6e-06 55.1 37 67.6
Zm00001eb353800 Zea mays HOM05D038576 ORTHO05D010489 3.3e-06 54.7 36 63.9
Lsat_1_v5_gn_7_68141 Lactuca sativa HOM05D008368 ORTHO05D010489 4.4e-06 54.3 32 78.1
Psat1g182840 Pisum sativum HOM05D008368 ORTHO05D010489 5.7e-06 53.9 33 72.7
Potri.008G203800 Populus trichocarpa HOM05D008368 ORTHO05D010489 5.7e-06 53.9 34 73.5
RcHm_v2.0_Chr0c32g0501461 Rosa chinensis HOM05D008368 ORTHO05D010489 5.7e-06 53.9 60 55.0
RcHm_v2.0_Chr0c32g0501651 Rosa chinensis HOM05D008368 ORTHO05D010489 5.7e-06 53.9 60 55.0
MELO3C006556.2 Cucumis melo HOM05D008368 ORTHO05D010489 7.5e-06 53.5 33 72.7
Prupe.1G152900 Prunus persica HOM05D008368 ORTHO05D010489 7.5e-06 53.5 61 54.1
arahy.Tifrunner.gnm1.ann1.121ATL Arachis hypogaea HOM05D008368 ORTHO05D010489 9.7e-06 53.1 62 50.0
arahy.Tifrunner.gnm1.ann1.IPV0IY Arachis hypogaea HOM05D008368 ORTHO05D010489 9.7e-06 53.1 62 50.0
FvH4_4g14770 Fragaria vesca HOM05D008368 ORTHO05D010489 9.7e-06 53.1 46 63.0


User provided reference genes

Program Settings