Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g073740 Amaranthus hybridus HOM05D002461 ORTHO05D000898 9.6e-266 919.8 550 100.0
Ah.11g044780 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.0e-212 740.7 623 77.7
Ah.02g117860 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.0e-154 550.1 387 74.7
Ah.14g080610 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-153 547.4 623 59.4
Ah.10g030780 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.4e-152 542.0 447 66.4
Ah.05g175000 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.1e-152 541.6 389 72.2
Ah.05g176570 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.3e-150 536.6 419 68.5
Ah.14g080440 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.1e-149 534.3 650 56.9
Ah.07g196560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-149 533.9 655 56.3
Ah.02g123850 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.8e-147 526.9 580 61.9
Ah.02g117970 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.9e-112 410.6 409 53.8
Ah.05g172940 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.5e-112 409.1 367 59.9
Ah.16g110300 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-108 397.9 393 55.5
Ah.15g098990 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-101 374.4 731 43.0
Ah.05g173030 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.4e-101 372.1 592 46.3
Ah.05g174440 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.1e-99 366.3 638 45.0
Ah.02g119150 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.0e-89 335.1 190 87.4
Ah.16g107710 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-82 311.2 461 42.5
Ah.13g069570 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-81 308.1 198 76.8
Ah.14g088400 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.9e-59 234.6 529 39.5
Ah.07g201510 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.7e-58 230.7 428 33.6
Ah.02g122330 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.6e-58 229.9 402 34.6
Ah.08g221620 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.6e-58 229.9 402 34.6
Ah.14g080250 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.3e-56 223.4 572 35.1
Ah.06g183710 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.8e-55 220.7 129 83.7
Ah.01g012310 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.2e-54 216.5 156 73.1
Ah.13g067560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-50 204.9 109 95.4
Ah.07g198020 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.6e-47 193.7 107 90.7
Ah.11g042210 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.4e-46 191.0 133 69.9
Ah.08g221640 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.1e-46 190.7 302 38.1
Ah.14g078970 Amaranthus hybridus HOM05D002461 ORTHO05D000898 9.9e-45 185.7 104 89.4
Ah.05g174110 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-42 178.3 391 32.2
Ah.14g079300 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.8e-39 166.8 89 94.4
Ah.10g026610 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.2e-39 166.4 195 45.1
Ah.01g012550 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.1e-38 164.1 125 60.0
Ah.09g226000 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.4e-37 160.2 175 46.9
Ah.09g227720 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.9e-36 156.8 176 45.5
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 1.4e-35 155.2 191 42.9
Ah.11g044790 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.1e-33 146.7 322 32.0
Ah.02g117950 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.3e-32 143.7 100 78.0
Ah.07g198850 Amaranthus hybridus HOM05D002461 ORTHO05D000898 9.6e-32 142.5 184 43.5
Ah.07g202370 Amaranthus hybridus HOM05D006271 ORTHO05D000898 1.6e-31 141.7 99 76.8
Ah.06g183730 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.6e-31 140.6 199 42.7
Ah.16g109180 Amaranthus hybridus HOM05D002461 ORTHO05D000898 9.0e-30 136.0 265 58.5
Ah.01g010610 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.6e-29 134.4 168 42.3
Ah.14g080190 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.4e-27 128.6 271 34.3
Ah.04g157580 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.5e-26 124.0 305 30.5
Ah.02g119980 Amaranthus hybridus HOM05D002461 ORTHO05D008675 3.0e-25 120.9 95 73.7
Ah.05g173710 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.6e-24 116.7 158 39.9
Ah.02g118270 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.4e-24 116.3 184 38.0
Ah.09g226010 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-23 115.2 158 38.0
Ah.04g160560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.1e-23 114.8 194 36.1
Ah.04g157770 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.4e-22 112.1 110 46.4
Ah.07g200990 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.1e-22 110.9 120 48.3
Ah.01g012530 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.0e-22 110.5 89 64.0
Ah.06g186220 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.0e-22 110.5 81 69.1
AUR62018099 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-22 110.5 342 24.3
Ah.02g119810 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.9e-22 109.8 154 38.3
Ah.07g202000 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.9e-22 109.8 84 69.0
Ah.09g227120 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.9e-22 109.8 71 70.4
AUR62039973 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-21 108.6 365 23.6
Ah.10g029880 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.5e-21 107.1 118 43.2
Ah.14g078310 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.5e-21 107.1 55 92.7
Ah.01g013140 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.8e-21 106.7 91 62.6
Ah.10g027110 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.8e-21 106.7 55 90.9
Ah.13g067990 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.8e-21 106.7 117 47.9
Ah.07g200980 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.9e-20 104.4 137 40.9
Ah.10g033340 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.4e-20 102.8 69 76.8
Ah.15g099800 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.4e-19 102.1 136 38.2
Ah.07g201750 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.1e-19 99.8 137 40.9
Ah.06g183740 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.5e-18 97.4 88 59.1
AUR62019536 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.6e-18 97.1 395 23.0
Ah.11g040890 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.9e-18 96.3 119 47.1
Ah.02g120720 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.0e-17 95.9 124 41.1
Ah.05g173700 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-17 95.5 93 49.5
AUR62010462 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-17 94.7 417 22.8
AUR62000408 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-15 88.6 187 31.0
AUR62043515 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.2e-15 86.3 224 30.8
Ah.02g121510 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.4e-14 85.5 94 43.6
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-14 85.5 458 20.3
AUR62008643 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-14 85.5 458 20.3
AUR62020656 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-14 85.5 458 20.3
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-14 85.5 458 20.3
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-14 85.5 458 20.3
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-14 85.5 458 20.3
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-14 85.1 458 20.3
AUR62044062 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-14 85.1 458 20.3
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.4e-14 84.7 458 20.3
AUR62022539 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-14 84.3 214 26.2
AUR62025505 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-14 84.3 187 29.4
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-14 84.0 465 20.0
AUR62008556 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-14 84.0 465 20.0
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-14 84.0 465 20.0
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-14 84.0 465 20.0
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.0e-14 84.0 465 20.0
AUR62044283 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.3e-14 83.6 465 20.0
AUR62039346 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.9e-14 83.2 412 20.9
Ah.07g197230 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-13 82.0 113 38.9
AUR62042658 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-13 82.0 279 23.7
AUR62014182 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.0e-13 81.6 278 23.7
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.6e-13 81.3 465 19.8
AUR62033905 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.6e-13 81.3 438 20.8
AUR62024626 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.4e-13 80.9 382 23.3
Ah.05g174580 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.8e-13 80.1 94 43.6
AUR62007003 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.8e-13 80.1 382 23.3
AUR62013325 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.8e-13 80.1 382 23.3
AUR62029710 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.8e-13 80.1 426 23.2
AUR62014771 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.6e-13 79.7 391 21.2
AUR62027688 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.6e-13 79.7 447 20.4
AUR62041720 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.0e-12 79.3 351 22.8
AUR62003732 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-12 78.2 382 22.3
AUR62014786 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-12 78.2 381 22.0
AUR62013878 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.8e-12 77.4 320 23.4
Ah.13g067980 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.4e-12 76.3 91 42.9
AUR62030114 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.4e-12 76.3 387 21.4
AUR62041423 Chenopodium quinoa HOM05D002461 ORTHO05D008988 1.1e-11 75.9 354 22.0
AUR62017377 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.9e-11 75.1 351 22.5
AUR62029947 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.2e-11 74.3 444 19.8
AUR62019069 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.2e-11 73.9 255 24.7
AUR62009195 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.1e-11 73.2 385 23.1
AUR62033520 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-10 72.4 266 23.7
Ah.04g157570 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-10 72.0 101 38.6
AUR62003872 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-10 72.0 376 22.3
AUR62030619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.1e-10 71.6 377 22.3
AUR62039905 Chenopodium quinoa HOM05D008127 ORTHO05D000898 3.5e-10 70.9 161 31.1
AUR62035884 Chenopodium quinoa HOM05D008127 ORTHO05D010494 4.6e-10 70.5 294 25.9
AUR62043619 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.6e-10 70.5 377 21.8
Ah.04g157760 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.1e-10 70.1 78 44.9
AUR62006829 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.1e-10 70.1 377 23.1
AUR62031134 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.1e-10 70.1 317 20.8
AUR62035971 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.1e-10 70.1 160 26.2
AUR62043170 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.9e-10 69.7 369 21.1
Ah.01g012540 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.0e-09 69.3 66 50.0
Ah.02g118090 Amaranthus hybridus HOM05D004012 ORTHO05D004752 2.3e-09 68.2 100 38.0
AUR62013764 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-09 68.2 198 25.8
AUR62033047 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-09 68.2 114 36.0
AUR62034039 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.3e-09 68.2 377 21.5
AUR62037746 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.0e-09 67.8 101 31.7
AUR62027351 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.9e-09 67.4 159 27.0
Ah.16g106940 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.1e-09 67.0 261 23.8
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.7e-09 66.6 159 26.4
Ah.01g009830 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.7e-09 66.2 132 31.8
Ah.14g083500 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.7e-09 66.2 261 23.8
AUR62011252 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.7e-09 66.2 377 20.2
AUR62038800 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.7e-09 66.2 101 30.7
Ah.07g200270 Amaranthus hybridus HOM05D014732 ORTHO05D000898 1.5e-08 65.5 364 21.7
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.5e-08 65.5 193 26.4
AUR62037107 Chenopodium quinoa HOM05D008127 ORTHO05D010494 1.9e-08 65.1 161 30.4
AUR62027923 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.3e-08 64.3 116 30.2
AUR62028801 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.3e-08 64.3 101 30.7
AUR62033389 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.3e-08 64.3 101 30.7
AUR62038068 Chenopodium quinoa HOM05D008127 ORTHO05D000898 4.3e-08 63.9 161 28.0
AUR62008234 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.7e-08 63.5 176 26.7
EL10Ac2g03335 Beta vulgaris HOM05D002461 ORTHO05D000898 7.4e-08 63.2 143 29.4
AUR62006070 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.4e-08 63.2 101 29.7
AUR62036132 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.7e-08 62.8 101 29.7
AUR62042613 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.7e-08 62.8 101 29.7
Ah.10g029480 Amaranthus hybridus HOM05D041183 ORTHO05D061181 1.6e-07 62.0 32 93.8
AUR62022494 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-07 62.0 165 26.1
AUR62033627 Chenopodium quinoa HOM05D008127 ORTHO05D010494 1.6e-07 62.0 161 30.4
AUR62034174 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.6e-07 62.0 101 29.7
AUR62011603 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-07 61.6 101 29.7
AUR62029050 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-07 61.6 101 28.7
AUR62035391 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.2e-07 61.6 101 28.7
Ah.14g080680 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.8e-07 61.2 50 54.0
AUR62005044 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.8e-07 61.2 101 28.7
AUR62041478 Chenopodium quinoa HOM05D002461 ORTHO05D000898 2.8e-07 61.2 127 29.1
AUR62034832 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.7e-07 60.8 175 29.7
AUR62040497 Chenopodium quinoa HOM05D008127 ORTHO05D010494 3.7e-07 60.8 244 24.6
Ah.02g121420 Amaranthus hybridus HOM05D041183 ORTHO05D062236 4.8e-07 60.5 32 90.6
AUR62002544 Chenopodium quinoa HOM05D002461 ORTHO05D000898 4.8e-07 60.5 241 24.5
AUR62015686 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.2e-07 59.7 114 29.8
AUR62035718 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.2e-07 59.7 101 28.7
AUR62026027 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-06 58.9 108 28.7
AUR62030064 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-06 58.9 175 29.7
AUR62030713 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-06 58.9 101 28.7
AUR62040042 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.4e-06 58.9 175 29.7
AUR62036177 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-06 58.5 90 32.2
Ah.07g200210 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.1e-06 57.8 113 33.6
AUR62014237 Chenopodium quinoa HOM05D002461 ORTHO05D000898 3.1e-06 57.8 210 26.7
Ah.07g199310 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.1e-06 57.4 188 27.7
Ah.05g174950 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.3e-06 57.0 74 40.5
AUR62030014 Chenopodium quinoa HOM05D000747 ORTHO05D004807 5.3e-06 57.0 119 31.1
AUR62037428 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.3e-06 57.0 211 27.0
AUR62032708 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.0e-06 56.2 105 33.3
AUR62041571 Chenopodium quinoa HOM05D008127 ORTHO05D010494 9.0e-06 56.2 188 27.7


User provided reference genes

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