Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g073150 Amaranthus hybridus HOM05D007315 ORTHO05D008940 0.0e+00 1161.4 589 100.0
EL10Ac3g06171 Beta vulgaris HOM05D007315 ORTHO05D008940 2.4e-158 563.1 647 55.6
AUR62002486 Chenopodium quinoa HOM05D007315 ORTHO05D008940 5.6e-155 552.0 597 56.1
AUR62023706 Chenopodium quinoa HOM05D007315 ORTHO05D008940 2.4e-145 520.0 587 55.0
Ah.07g203260 Amaranthus hybridus HOM05D007315 ORTHO05D008940 1.6e-138 497.3 579 55.1
Cfa008519 Carpinus fangiana HOM05D007315 ORTHO05D008940 8.3e-66 255.8 677 34.9
Haze_11126 Corylus avellana HOM05D007315 ORTHO05D008940 1.4e-65 255.0 676 34.0
QL10p064604 Quercus lobata HOM05D007315 ORTHO05D008940 3.2e-65 253.8 658 35.1
QL10p065726 Quercus lobata HOM05D007315 ORTHO05D008940 7.8e-64 249.2 699 34.6
Dinv33248 Davidia involucrata HOM05D007315 ORTHO05D008940 9.9e-59 232.3 638 35.9
TWI15G1252 Tripterygium wilfordii HOM05D007315 ORTHO05D008940 3.7e-58 230.3 623 35.2
Atru.chr3.1974 Acer truncatum HOM05D007315 ORTHO05D008940 6.0e-56 223.0 640 33.3
Prupe.7G270200 Prunus persica HOM05D007315 ORTHO05D008940 7.8e-56 222.6 600 34.0
CANSAT78G2341 Cannabis sativa HOM05D007315 ORTHO05D008940 2.3e-55 221.1 656 32.9
Potri.017G002200 Populus trichocarpa HOM05D007315 ORTHO05D008940 5.1e-55 219.9 678 32.4
GSVIVG01038254001 Vitis vinifera HOM05D007315 ORTHO05D008940 1.5e-54 218.4 602 35.0
Cpa.g.sc151.10 Carica papaya HOM05D007315 ORTHO05D008940 5.6e-54 216.5 577 35.0
CiPaw.02G125100 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.2e-53 215.3 666 32.4
Sc19g0002390 Simmondsia chinensis HOM05D007315 ORTHO05D008940 4.7e-53 213.4 626 35.0
Potri.007G145400 Populus trichocarpa HOM05D007315 ORTHO05D008940 1.4e-52 211.8 668 32.9
Ciclev10019166m.g Citrus clementina HOM05D007315 ORTHO05D008940 6.8e-52 209.5 668 31.7
ClCG06G009750 Citrullus lanatus HOM05D007315 ORTHO05D008940 2.0e-51 208.0 674 33.4
Sabra07G0115600 Salix brachista HOM05D007315 ORTHO05D008940 7.1e-49 199.5 672 33.6
FAN26G2088 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.7e-47 194.9 613 33.8
FAN26G2097 Fragaria x ananassa HOM05D007315 ORTHO05D008940 1.7e-47 194.9 613 33.8
PGR042G2132 Punica granatum HOM05D007315 ORTHO05D008940 2.3e-47 194.5 617 32.1
DCAR_027494 Daucus carota HOM05D007315 ORTHO05D008940 3.0e-47 194.1 642 33.8
CsaV3_2G011220 Cucumis sativus L. HOM05D007315 ORTHO05D008940 3.9e-47 193.7 648 33.0
RcHm_v2.0_Chr2g0084511 Rosa chinensis HOM05D007315 ORTHO05D008940 1.9e-46 191.4 652 31.9
FAN23G0376 Fragaria x ananassa HOM05D007315 ORTHO05D008940 4.3e-46 190.3 613 32.5
Rhsim09G0003400 Rhododendron simsii HOM05D007315 ORTHO05D008940 5.6e-46 189.9 538 33.1
Manes.05G207100 Manihot esculenta HOM05D007315 ORTHO05D008940 1.3e-45 188.7 559 32.4
Eucgr.A00422 Eucalyptus grandis HOM05D007315 ORTHO05D008940 6.2e-45 186.4 646 30.7
MELO3C020340.2 Cucumis melo HOM05D007315 ORTHO05D008940 8.1e-45 186.0 625 31.8
Sed0008861 Sechium edule HOM05D007315 ORTHO05D008940 1.1e-44 185.7 617 33.7
Medtr1g073930 Medicago truncatula HOM05D007315 ORTHO05D008940 4.0e-44 183.7 640 32.5
Gorai.011G004300 Gossypium raimondii HOM05D007315 ORTHO05D008940 5.3e-44 183.3 622 32.0
Duzib128G0490 Durio zibethinus HOM05D007315 ORTHO05D008940 1.2e-43 182.2 654 32.7
Nn1g09432 Nelumbo nucifera HOM05D007315 ORTHO05D008940 5.8e-43 179.9 721 31.5
Lj5g0028022 Lotus japonicus HOM05D007315 ORTHO05D008940 1.7e-42 178.3 658 30.2
Ca_09817_v3 Cicer arietinum L. HOM05D007315 ORTHO05D008940 2.2e-42 177.9 661 31.9
MD15G1142800 Malus domestica HOM05D007315 ORTHO05D008940 2.2e-42 177.9 663 31.4
FAN28G1745 Fragaria x ananassa HOM05D007315 ORTHO05D008940 2.9e-42 177.6 601 32.3
FvH4_1g00220 Fragaria vesca HOM05D007315 ORTHO05D008940 1.4e-41 175.3 589 31.4
Thecc.05G001400 Theobroma cacao HOM05D007315 ORTHO05D008940 1.2e-40 172.2 631 33.4
Gohir.D10G003900 Gossypium hirsutum HOM05D007315 ORTHO05D008940 2.7e-40 171.0 462 35.3
TAR362G0103 Trochodendron aralioides HOM05D007315 ORTHO05D008940 7.8e-40 169.5 658 31.0
Glyma.10G188000 Glycine max HOM05D007315 ORTHO05D008940 1.0e-39 169.1 678 31.3
CiPaw.01G202000 Carya illinoinensis HOM05D007315 ORTHO05D008940 1.3e-39 168.7 629 32.8
Sabra17G0006200 Salix brachista HOM05D007315 ORTHO05D008940 2.3e-39 167.9 614 32.4
Phvul.007G128900 Phaseolus vulgaris HOM05D007315 ORTHO05D008940 1.9e-38 164.9 644 31.1
Glyma.20G202800 Glycine max HOM05D007315 ORTHO05D008940 2.8e-37 161.0 643 31.3
TPR.G26430 Trifolium pratense HOM05D007315 ORTHO05D008940 3.6e-37 160.6 635 31.5
Lalb_Chr02g0150561 Lupinus albus HOM05D007315 ORTHO05D008940 4.8e-37 160.2 669 30.0
Psat6g133000 Pisum sativum HOM05D007315 ORTHO05D008940 4.8e-37 160.2 568 30.8
Gohir.A10G003901 Gossypium hirsutum HOM05D007315 ORTHO05D008940 1.8e-36 158.3 682 29.6
Nitab4.5_0002789g0030 Nicotiana tabacum HOM05D007315 ORTHO05D008940 2.4e-36 157.9 374 35.8
Peaxi162Scf00057g00225 Petunia axillaris HOM05D007315 ORTHO05D008940 6.9e-36 156.4 518 31.9
VMungo0720G0938 Vigna mungo HOM05D007315 ORTHO05D008940 2.0e-35 154.8 594 31.6
CSS0008240 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.4e-35 154.1 441 31.5
Atru.chr3.1981 Acer truncatum HOM05D007315 ORTHO05D008940 5.8e-35 153.3 446 33.0
QL10p064445 Quercus lobata HOM05D007315 ORTHO05D008940 1.7e-34 151.8 336 35.7
COL.COLO4_23477 Corchorus olitorius HOM05D007315 ORTHO05D008940 4.9e-34 150.2 395 34.9
PSO732G0261 Papaver somniferum HOM05D007315 ORTHO05D008940 4.9e-34 150.2 447 30.4
CSS0005699 Camellia sinensis var. sinensis HOM05D007315 ORTHO05D008940 3.2e-33 147.5 585 29.6
Nitab4.5_0000160g0040 Nicotiana tabacum HOM05D007315 ORTHO05D008940 9.3e-33 146.0 483 31.7
Sopen12g009190 Solanum pennellii HOM05D007315 ORTHO05D008940 9.3e-33 146.0 645 28.8
Solyc12g017970.1 Solanum lycopersicum HOM05D007315 ORTHO05D008940 1.6e-32 145.2 643 28.6
arahy.Tifrunner.gnm1.ann1.K0K7GF Arachis hypogaea HOM05D007315 ORTHO05D008940 4.6e-32 143.7 562 30.6
CDE07G0865 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 7.9e-32 142.9 582 29.9
Oeu018063.1 Olea europaea HOM05D007315 ORTHO05D008940 7.9e-32 142.9 464 30.4
CARHR139160 Cardamine hirsuta HOM05D007315 ORTHO05D008940 1.5e-30 138.7 515 31.5
AT2G43990 Arabidopsis thaliana HOM05D007315 ORTHO05D008940 1.9e-30 138.3 539 31.7
PGSC0003DMG400020383 Solanum tuberosum HOM05D007315 ORTHO05D008940 2.5e-30 137.9 649 28.4
MD00G1086900 Malus domestica HOM05D007315 ORTHO05D008940 4.3e-30 137.1 529 31.6
Carub.0004s2655 Capsella rubella HOM05D007315 ORTHO05D008940 5.6e-30 136.7 511 30.3
AL4G42870 Arabidopsis lyrata HOM05D007315 ORTHO05D008940 1.4e-28 132.1 472 32.4
arahy.Tifrunner.gnm1.ann1.BRX18T Arachis hypogaea HOM05D007315 ORTHO05D008940 1.4e-28 132.1 562 30.8
MBI07_g42068_MAGBIO Magnolia biondii HOM05D007315 ORTHO05D008940 9.0e-28 129.4 517 29.8
THA.LOC104802348 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 1.2e-27 129.0 590 29.5
Hma1.2p1_1085F.1_g255400 Hydrangea macrophylla HOM05D007315 ORTHO05D008940 2.0e-27 128.3 459 30.7
Thhalv10001359m.g Eutrema salsugineum HOM05D007315 ORTHO05D008940 1.0e-26 125.9 555 28.5
Aqoxy5G03722 Aquilegia oxysepala HOM05D007315 ORTHO05D008940 2.2e-26 124.8 635 26.9
Sp4g26080 Schrenkiella parvula HOM05D007315 ORTHO05D008940 6.5e-26 123.2 322 33.5
THA.LOC104804323 Tarenaya hassleriana HOM05D007315 ORTHO05D008940 8.4e-26 122.9 597 28.1
ECA238G3268 Erigeron canadensis HOM05D007315 ORTHO05D008940 3.9e-23 114.0 393 30.8
BolC4t22121H Brassica oleracea HOM05D007315 ORTHO05D008940 4.3e-22 110.5 480 31.2
SalBow3G0669 Salvia bowleyana HOM05D007315 ORTHO05D008940 5.7e-22 110.2 617 27.9
C04p04910 Brassica napus HOM05D007315 ORTHO05D008940 7.4e-22 109.8 422 32.5
CDE04G0399 Ceratophyllum demersum HOM05D007315 ORTHO05D008940 3.7e-21 107.5 487 29.2
BraA05t19400Z Brassica rapa HOM05D007315 ORTHO05D008940 3.1e-20 104.4 486 30.9
A05p04140 Brassica napus HOM05D007315 ORTHO05D008940 2.6e-19 101.3 479 30.3
MSTRG.24547 Avicennia marina HOM05D007315 ORTHO05D008940 2.5e-17 94.7 646 26.5
HanXRQChr14g0438301 Helianthus annuus HOM05D007315 ORTHO05D008940 2.5e-17 94.7 371 26.4
COL.COLO4_20289 Corchorus olitorius HOM05D007315 ORTHO05D008940 1.0e-15 89.4 191 34.6
Zm00001eb136730 Zea mays HOM05D019859 ORTHO05D008940 1.8e-15 88.6 429 28.7
Os11g0247500 Oryza sativa ssp. japonica HOM05D019859 ORTHO05D008940 3.9e-15 87.4 373 29.0
HPP92_007592 Vanilla planifolia HOM05D007315 ORTHO05D008940 3.9e-15 87.4 364 29.4
Zm00001eb434100 Zea mays HOM05D019859 ORTHO05D008940 1.9e-14 85.1 538 27.7
Migut.N03024 Erythranthe guttata HOM05D007315 ORTHO05D008940 5.7e-14 83.6 520 25.2
SGA_v2.0_scaffold25G11016 Striga asiatica HOM05D007315 ORTHO05D008940 2.2e-13 81.6 627 23.6
BcaC02g12347 Brassica carinata HOM05D007315 ORTHO05D008940 2.8e-13 81.3 419 31.0
Hund12275 Selenicereus undatus HOM05D003812 ORTHO05D004393 5.9e-11 73.6 122 45.1
SGA_v2.0_scaffold19G08894 Striga asiatica HOM05D007315 ORTHO05D008940 1.2e-08 65.9 312 28.5
ATR0743G232 Amborella trichopoda HOM05D007315 ORTHO05D008940 4.6e-08 63.9 179 31.3
Zm00001eb442140 Zea mays HOM05D019859 ORTHO05D008940 5.1e-07 60.5 107 37.4


User provided reference genes

Program Settings