Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g072860 Amaranthus hybridus HOM05D019141 ORTHO05D009358 0.0e+00 1580.5 803 100.0
EL10Ac3g05943 Beta vulgaris HOM05D019141 ORTHO05D009358 2.1e-128 464.2 673 46.2
AUR62002309 Chenopodium quinoa HOM05D019141 ORTHO05D009358 2.0e-123 447.6 677 47.1
AUR62015381 Chenopodium quinoa HOM05D019141 ORTHO05D009358 4.1e-108 396.7 672 43.9
Hund03161 Selenicereus undatus HOM05D019141 ORTHO05D009358 1.7e-61 241.9 693 32.9
Duzib268G0443 Durio zibethinus HOM05D008235 ORTHO05D009358 7.0e-15 87.0 276 29.0
Dinv22732 Davidia involucrata HOM05D008235 ORTHO05D009358 1.2e-14 86.3 333 26.4
Sabra17G0019200 Salix brachista HOM05D008235 ORTHO05D009358 7.7e-14 83.6 301 28.2
Sabra07G0105000 Salix brachista HOM05D008235 ORTHO05D009358 1.0e-13 83.2 306 27.1
Sc13g0006760 Simmondsia chinensis HOM05D008235 ORTHO05D009358 1.3e-13 82.8 393 27.5
Haze_01504 Corylus avellana HOM05D008235 ORTHO05D009358 2.2e-13 82.0 297 28.6
Manes.04G042909 Manihot esculenta HOM05D008235 ORTHO05D009358 2.2e-13 82.0 314 26.8
QL10p049494 Quercus lobata HOM05D008235 ORTHO05D009358 2.2e-13 82.0 234 27.8
Potri.017G029800 Populus trichocarpa HOM05D008235 ORTHO05D009358 2.9e-13 81.6 387 26.6
Potri.007G128500 Populus trichocarpa HOM05D008235 ORTHO05D009358 1.5e-12 79.3 268 28.0
Thecc.04G179500 Theobroma cacao HOM05D008235 ORTHO05D009358 1.9e-12 79.0 228 28.5
Duzib212G0859 Durio zibethinus HOM05D008235 ORTHO05D009358 6.1e-11 73.9 325 26.8
CSS0022265 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 8.0e-11 73.6 401 25.7
CSS0049607 Camellia sinensis var. sinensis HOM05D008235 ORTHO05D009358 1.0e-10 73.2 335 27.8
Gohir.A10G137600 Gossypium hirsutum HOM05D008235 ORTHO05D009358 3.0e-10 71.6 233 28.8
Manes.11G121000 Manihot esculenta HOM05D008235 ORTHO05D009358 6.8e-10 70.5 343 25.9
CANSAT78G2326 Cannabis sativa HOM05D008235 ORTHO05D009358 2.0e-09 68.9 359 25.6
Gohir.D10G129000 Gossypium hirsutum HOM05D008235 ORTHO05D009358 3.4e-09 68.2 232 27.2
Gorai.011G142400 Gossypium raimondii HOM05D008235 ORTHO05D009358 3.4e-09 68.2 232 27.2
ClCG07G015680 Citrullus lanatus HOM05D008235 ORTHO05D009358 4.8e-08 64.3 348 25.0
GSVIVG01010760001 Vitis vinifera HOM05D008235 ORTHO05D009358 6.3e-08 63.9 212 26.9
CiPaw.01G099800 Carya illinoinensis HOM05D008235 ORTHO05D009358 1.4e-07 62.8 270 25.9
Eucgr.A00083 Eucalyptus grandis HOM05D008235 ORTHO05D009358 1.8e-07 62.4 68 45.6
COL.COLO4_07668 Corchorus olitorius HOM05D008235 ORTHO05D009358 3.1e-07 61.6 320 25.3
Gorai.005G128900 Gossypium raimondii HOM05D008235 ORTHO05D009358 1.2e-06 59.7 230 26.1
Solyc05g050740.3 Solanum lycopersicum HOM05D014650 ORTHO05D009358 1.6e-06 59.3 112 35.7
Dinv44188 Davidia involucrata HOM05D008235 ORTHO05D009358 3.5e-06 58.2 177 28.2
Ciclev10019428m.g Citrus clementina HOM05D008235 ORTHO05D009358 7.7e-06 57.0 278 24.1
TAR365G0029 Trochodendron aralioides HOM05D008235 ORTHO05D009358 7.7e-06 57.0 355 27.6


User provided reference genes

Program Settings