Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g071990 Amaranthus hybridus HOM05D000697 ORTHO05D026519 4.8e-72 274.6 163 100.0
EL10Ac3g05466 Beta vulgaris HOM05D000697 ORTHO05D026519 5.5e-28 128.3 168 57.7
AUR62041399 Chenopodium quinoa HOM05D000697 ORTHO05D026519 9.5e-20 100.9 107 50.5
AUR62016126 Chenopodium quinoa HOM05D000697 ORTHO05D026519 4.7e-19 98.6 108 51.9
PSO210G6856 Papaver somniferum HOM05D000697 ORTHO05D000169 2.5e-12 76.3 98 40.8
PSO761G0678 Papaver somniferum HOM05D000697 ORTHO05D000169 1.2e-11 73.9 98 39.8
Aqoxy2G02770 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 4.7e-11 72.0 104 38.5
CDE08G1122 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 4.7e-11 72.0 145 29.0
CDE02G3005 Ceratophyllum demersum HOM05D000697 ORTHO05D000169 8.0e-11 71.2 151 28.5
MBI19_g07239_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 1.8e-10 70.1 139 30.2
Aqoxy5G02880 Aquilegia oxysepala HOM05D000697 ORTHO05D000169 2.3e-10 69.7 140 35.0
TAR365G0994 Trochodendron aralioides HOM05D000697 ORTHO05D000169 2.3e-10 69.7 141 32.6
PSO170G1051 Papaver somniferum HOM05D000697 ORTHO05D000169 5.2e-10 68.6 138 31.2
TAR362G0901 Trochodendron aralioides HOM05D000697 ORTHO05D000169 1.2e-09 67.4 138 31.9
Sc17g0000450 Simmondsia chinensis HOM05D000697 ORTHO05D000169 2.0e-09 66.6 133 39.8
Hma1.2p1_0212F.1_g089940 Hydrangea macrophylla HOM05D000697 ORTHO05D000169 5.8e-09 65.1 143 30.1
Lj5P334T33 Lonicera japonica HOM05D000697 ORTHO05D000169 1.7e-08 63.5 149 28.2
MBI18_g17318_MAGBIO Magnolia biondii HOM05D000697 ORTHO05D000169 1.7e-08 63.5 137 29.9
unitig_736.g22936 Utricularia gibba HOM05D000697 ORTHO05D000169 1.7e-08 63.5 141 31.2
PSO357G0541 Papaver somniferum HOM05D000697 ORTHO05D000169 2.2e-08 63.2 138 29.7
PGR044G0370 Punica granatum HOM05D000697 ORTHO05D000169 2.9e-08 62.8 140 30.7
AUR62024652 Chenopodium quinoa HOM05D000697 ORTHO05D000169 8.3e-08 61.2 127 32.3
ATR0796G285 Amborella trichopoda HOM05D000697 ORTHO05D000169 1.4e-07 60.5 141 29.1
Ah.11g049250 Amaranthus hybridus HOM05D000697 ORTHO05D000169 1.9e-07 60.1 133 31.6
Oeu008473.1 Olea europaea HOM05D000697 ORTHO05D000169 4.1e-07 58.9 144 31.2
Lj1C17T9 Lonicera japonica HOM05D000697 ORTHO05D000169 5.4e-07 58.5 145 29.7
Nitab4.5_0003540g0010 Nicotiana tabacum HOM05D000697 ORTHO05D000169 5.4e-07 58.5 142 31.0
Ah.02g112290 Amaranthus hybridus HOM05D000697 ORTHO05D000169 7.1e-07 58.2 132 29.5
AUR62011806 Chenopodium quinoa HOM05D000697 ORTHO05D000169 7.1e-07 58.2 127 30.7
THA.LOC104817459 Tarenaya hassleriana HOM05D000697 ORTHO05D000169 7.1e-07 58.2 106 36.8
HPP92_013525 Vanilla planifolia HOM05D000697 ORTHO05D000169 7.1e-07 58.2 142 27.5
Gohir.D11G114200 Gossypium hirsutum HOM05D000697 ORTHO05D000169 9.2e-07 57.8 145 28.3
Nitab4.5_0008277g0020 Nicotiana tabacum HOM05D000697 ORTHO05D000169 9.2e-07 57.8 142 31.0
HanXRQChr06g0168171 Helianthus annuus HOM05D000697 ORTHO05D000169 1.2e-06 57.4 103 35.0
Nn3g21690 Nelumbo nucifera HOM05D000697 ORTHO05D000169 1.2e-06 57.4 149 29.5
Eucgr.K03544 Eucalyptus grandis HOM05D000697 ORTHO05D000169 1.6e-06 57.0 142 30.3
Gohir.D07G132900 Gossypium hirsutum HOM05D000697 ORTHO05D000169 1.6e-06 57.0 89 33.7
Gorai.001G144200 Gossypium raimondii HOM05D000697 ORTHO05D000169 1.6e-06 57.0 89 33.7
EL10As5g23530 Beta vulgaris HOM05D000697 ORTHO05D000169 2.1e-06 56.6 132 28.8
Gorai.007G122800 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.1e-06 56.6 144 28.5
Gorai.008G139700 Gossypium raimondii HOM05D000697 ORTHO05D000169 2.1e-06 56.6 131 32.8
Actinidia20994 Actinidia chinensis HOM05D000697 ORTHO05D000169 3.5e-06 55.8 140 30.0
Duzib147G1667 Durio zibethinus HOM05D000697 ORTHO05D000169 3.5e-06 55.8 159 27.7
Gohir.A07G128500 Gossypium hirsutum HOM05D000697 ORTHO05D000169 3.5e-06 55.8 89 32.6
Oeu038018.1 Olea europaea HOM05D000697 ORTHO05D000169 3.5e-06 55.8 151 31.1
Gohir.D12G128700 Gossypium hirsutum HOM05D000697 ORTHO05D000169 4.6e-06 55.5 91 38.5
Cpa.g.sc18.43 Carica papaya HOM05D000697 ORTHO05D000169 6.0e-06 55.1 140 27.1
CiPaw.08G138500 Carya illinoinensis HOM05D000697 ORTHO05D000169 6.0e-06 55.1 146 26.7
COL.COLO4_23232 Corchorus olitorius HOM05D000697 ORTHO05D000169 6.0e-06 55.1 141 28.4
Carub.0005s2914 Capsella rubella HOM05D000697 ORTHO05D000169 7.8e-06 54.7 144 27.8
Dinv10098 Davidia involucrata HOM05D000697 ORTHO05D000169 7.8e-06 54.7 126 31.0
Gorai.008G065300 Gossypium raimondii HOM05D000697 ORTHO05D000169 7.8e-06 54.7 142 29.6
unitig_62.g23907 Utricularia gibba HOM05D004856 ORTHO05D005710 7.8e-06 54.7 94 34.0


User provided reference genes

Program Settings