Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g071490 Amaranthus hybridus HOM05D005560 ORTHO05D006862 4.3e-56 221.1 111 100.0
EL10Ac3g05546 Beta vulgaris HOM05D005560 ORTHO05D006862 6.9e-46 187.2 113 85.8
Sc13g0007210 Simmondsia chinensis HOM05D005560 ORTHO05D006862 8.7e-41 170.2 112 75.9
Dinv15139 Davidia involucrata HOM05D005560 ORTHO05D006862 2.5e-40 168.7 112 78.6
TAR371G1140 Trochodendron aralioides HOM05D005560 ORTHO05D006862 2.5e-40 168.7 113 74.3
arahy.Tifrunner.gnm1.ann1.JWH7Q7 Arachis hypogaea HOM05D005560 ORTHO05D006862 5.6e-40 167.5 113 75.2
Lj6E694T0 Lonicera japonica HOM05D005560 ORTHO05D006862 1.6e-39 166.0 109 77.1
CSS0010593 Camellia sinensis var. sinensis HOM05D005560 ORTHO05D006862 4.8e-39 164.5 113 70.8
Nn3g21792 Nelumbo nucifera HOM05D005560 ORTHO05D006862 4.8e-39 164.5 112 72.3
COL.COLO4_34571 Corchorus olitorius HOM05D005560 ORTHO05D006862 6.2e-39 164.1 113 75.2
Oeu048287.1 Olea europaea HOM05D005560 ORTHO05D006862 8.1e-39 163.7 110 72.7
Ciclev10006078m.g Citrus clementina HOM05D005560 ORTHO05D006862 1.4e-38 162.9 112 72.3
PGSC0003DMG401029058 Solanum tuberosum HOM05D005560 ORTHO05D006862 1.4e-38 162.9 105 77.1
Dinv44258 Davidia involucrata HOM05D005560 ORTHO05D006862 1.8e-38 162.5 112 75.9
Nitab4.5_0012592g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.1e-38 161.8 104 77.9
AUR62016242 Chenopodium quinoa HOM05D005560 ORTHO05D006862 4.0e-38 161.4 85 92.9
Solyc01g058280.4 Solanum lycopersicum HOM05D005560 ORTHO05D006862 5.3e-38 161.0 104 77.9
Sopen01g023770 Solanum pennellii HOM05D005560 ORTHO05D006862 5.3e-38 161.0 104 77.9
Ca_00962_v3 Cicer arietinum L. HOM05D005560 ORTHO05D006862 6.9e-38 160.6 112 72.3
TPR.G33875 Trifolium pratense HOM05D005560 ORTHO05D006862 6.9e-38 160.6 112 72.3
Prupe.1G113300 Prunus persica HOM05D005560 ORTHO05D006862 1.2e-37 159.8 91 82.4
vmacro09713 Vaccinium macrocarpon HOM05D005560 ORTHO05D006862 1.2e-37 159.8 108 72.2
MELO3C015305.2 Cucumis melo HOM05D005560 ORTHO05D006862 2.0e-37 159.1 100 76.0
Lj6g0013029 Lotus japonicus HOM05D005560 ORTHO05D006862 2.0e-37 159.1 112 72.3
Manes.11G109500 Manihot esculenta HOM05D005560 ORTHO05D006862 5.8e-37 157.5 88 81.8
Glyma.15G138200 Glycine max HOM05D005560 ORTHO05D006862 7.6e-37 157.1 112 70.5
Medtr2g033590 Medicago truncatula HOM05D005560 ORTHO05D006862 7.6e-37 157.1 112 72.3
CAN.G938.2 Capsicum annuum HOM05D005560 ORTHO05D006862 9.9e-37 156.8 106 72.6
ECA246G4816 Erigeron canadensis HOM05D005560 ORTHO05D006862 9.9e-37 156.8 103 74.8
Lalb_Chr18g0058561 Lupinus albus HOM05D005560 ORTHO05D006862 1.3e-36 156.4 112 69.6
Lalb_Chr20g0120691 Lupinus albus HOM05D005560 ORTHO05D006862 1.3e-36 156.4 89 80.9
Manes.11G060400 Manihot esculenta HOM05D005560 ORTHO05D006862 1.3e-36 156.4 111 69.4
TPR.G30159 Trifolium pratense HOM05D005560 ORTHO05D006862 1.3e-36 156.4 112 70.5
Aqoxy5G02923 Aquilegia oxysepala HOM05D005560 ORTHO05D006862 1.7e-36 156.0 105 73.3
Medtr2g097970 Medicago truncatula HOM05D005560 ORTHO05D006862 2.2e-36 155.6 112 70.5
QL06p012974 Quercus lobata HOM05D005560 ORTHO05D006862 2.2e-36 155.6 106 74.5
CAN.G1860.1 Capsicum annuum HOM05D005560 ORTHO05D006862 2.9e-36 155.2 107 70.1
CDE06G0356 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 2.9e-36 155.2 111 69.4
Potri.008G102200 Populus trichocarpa HOM05D005560 ORTHO05D006862 2.9e-36 155.2 94 77.7
TWI09G0868 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 2.9e-36 155.2 112 69.6
VMungo0540G1255 Vigna mungo HOM05D005560 ORTHO05D006862 2.9e-36 155.2 107 73.8
Phvul.006G120000 Phaseolus vulgaris HOM05D005560 ORTHO05D006862 6.4e-36 154.1 107 72.9
FAN07G2916 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.1e-35 153.3 95 72.6
Peaxi162Scf00228g00733 Petunia axillaris HOM05D005560 ORTHO05D006862 1.1e-35 153.3 104 73.1
Sabra10G0114700 Salix brachista HOM05D005560 ORTHO05D006862 1.4e-35 152.9 86 84.9
FAN12G4019 Fragaria x ananassa HOM05D005560 ORTHO05D006862 1.9e-35 152.5 95 72.6
MD13G1149300 Malus domestica HOM05D005560 ORTHO05D006862 1.9e-35 152.5 93 75.3
PSO782G0665 Papaver somniferum HOM05D005560 ORTHO05D006862 1.9e-35 152.5 93 76.3
Cc06_g13180 Coffea canephora HOM05D005560 ORTHO05D006862 2.4e-35 152.1 94 74.5
MD16G1149600 Malus domestica HOM05D005560 ORTHO05D006862 2.4e-35 152.1 93 74.2
PSO063G2615 Papaver somniferum HOM05D005560 ORTHO05D006862 2.4e-35 152.1 93 75.3
Sed0008051 Sechium edule HOM05D005560 ORTHO05D006862 2.4e-35 152.1 95 73.7
HanXRQChr01g0022341 Helianthus annuus HOM05D005560 ORTHO05D006862 4.2e-35 151.4 91 79.1
Atru.chr4.3063 Acer truncatum HOM05D005560 ORTHO05D006862 5.4e-35 151.0 112 67.9
CsaV3_1G038810 Cucumis sativus L. HOM05D005560 ORTHO05D006862 5.4e-35 151.0 99 71.7
RcHm_v2.0_Chr4g0425981 Rosa chinensis HOM05D005560 ORTHO05D006862 7.1e-35 150.6 95 71.6
FvH4_4g20620 Fragaria vesca HOM05D005560 ORTHO05D006862 1.2e-34 149.8 95 71.6
Hma1.2p1_1400F.1_g280950 Hydrangea macrophylla HOM05D005560 ORTHO05D006862 1.2e-34 149.8 104 74.0
Glyma.17G036700 Glycine max HOM05D005560 ORTHO05D006862 2.7e-34 148.7 88 80.7
Gohir.A10G174500 Gossypium hirsutum HOM05D005560 ORTHO05D006862 3.5e-34 148.3 112 66.1
GSVIVG01034955001 Vitis vinifera HOM05D001281 ORTHO05D001139 4.6e-34 147.9 111 68.5
Duzib212G0918 Durio zibethinus HOM05D005560 ORTHO05D006862 6.0e-34 147.5 112 67.0
THA.LOC104827102 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 6.0e-34 147.5 112 66.1
SGA_v2.0_scaffold157G37338 Striga asiatica HOM05D005560 ORTHO05D006862 1.0e-33 146.7 111 66.7
arahy.Tifrunner.gnm1.ann1.K4HITJ Arachis hypogaea HOM05D005560 ORTHO05D006862 1.8e-33 146.0 104 73.1
MSTRG.3846 Avicennia marina HOM05D005560 ORTHO05D006862 1.8e-33 146.0 112 65.2
Nn8g38759 Nelumbo nucifera HOM05D005560 ORTHO05D006862 1.8e-33 146.0 103 70.9
Glyma.09G033400 Glycine max HOM05D005560 ORTHO05D006862 3.0e-33 145.2 114 68.4
Nitab4.5_0002561g0080 Nicotiana tabacum HOM05D005560 ORTHO05D006862 3.9e-33 144.8 96 76.0
Gohir.A02G055900 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.7e-33 144.1 112 66.1
Gohir.D02G061100 Gossypium hirsutum HOM05D005560 ORTHO05D006862 6.7e-33 144.1 112 66.1
DCAR_026978 Daucus carota HOM05D005560 ORTHO05D006862 1.5e-32 142.9 103 70.9
Lsat_1_v5_gn_6_116081 Lactuca sativa HOM05D005560 ORTHO05D006862 1.5e-32 142.9 100 74.0
Migut.G00039 Erythranthe guttata HOM05D005560 ORTHO05D006862 3.3e-32 141.7 103 64.1
BraA09t36124Z Brassica rapa HOM05D005560 ORTHO05D006862 4.3e-32 141.4 100 68.0
QL02p001630 Quercus lobata HOM05D005560 ORTHO05D006862 4.3e-32 141.4 90 74.4
Aa31LG11G8340 Aethionema arabicum HOM05D005560 ORTHO05D006862 5.6e-32 141.0 100 69.0
Hund11992 Selenicereus undatus HOM05D005560 ORTHO05D006862 5.6e-32 141.0 80 83.8
HPP92_015326 Vanilla planifolia HOM05D005560 ORTHO05D006862 5.6e-32 141.0 100 65.0
Cpa.g.sc9.16 Carica papaya HOM05D005560 ORTHO05D006862 7.4e-32 140.6 99 66.7
Thhalv10005160m.g Eutrema salsugineum HOM05D005560 ORTHO05D006862 7.4e-32 140.6 99 68.7
Potri.010G148600 Populus trichocarpa HOM05D005560 ORTHO05D006862 9.6e-32 140.2 87 77.0
CARHR287970 Cardamine hirsuta HOM05D005560 ORTHO05D006862 1.3e-31 139.8 99 67.7
Sp2g19850 Schrenkiella parvula HOM05D005560 ORTHO05D006862 1.3e-31 139.8 99 68.7
Gohir.D10G181000 Gossypium hirsutum HOM05D005560 ORTHO05D006862 1.6e-31 139.4 111 64.0
Psat0s5068g0040 Pisum sativum HOM05D005560 ORTHO05D006862 1.6e-31 139.4 104 68.3
AL8G23330 Arabidopsis lyrata HOM05D005560 ORTHO05D006862 2.1e-31 139.0 99 67.7
BolC7t44528H Brassica oleracea HOM05D005560 ORTHO05D006862 2.1e-31 139.0 92 71.7
MBI10_g06741_MAGBIO Magnolia biondii HOM05D005560 ORTHO05D006862 3.7e-31 138.3 104 63.5
PGR004G2070 Punica granatum HOM05D005560 ORTHO05D006862 3.7e-31 138.3 111 65.8
CiPaw.02G072600 Carya illinoinensis HOM05D005560 ORTHO05D006862 4.8e-31 137.9 99 65.7
HanXRQChr10g0310551 Helianthus annuus HOM05D005560 ORTHO05D006862 4.8e-31 137.9 80 82.5
CANSAT78G0499 Cannabis sativa HOM05D005560 ORTHO05D006862 6.2e-31 137.5 94 67.0
CiPaw.01G134900 Carya illinoinensis HOM05D005560 ORTHO05D006862 6.2e-31 137.5 95 70.5
ClCG03G017390 Citrullus lanatus HOM05D005560 ORTHO05D006862 6.2e-31 137.5 91 71.4
Carub.0008s0942 Capsella rubella HOM05D005560 ORTHO05D006862 8.1e-31 137.1 99 66.7
AT5G49540 Arabidopsis thaliana HOM05D005560 ORTHO05D006862 1.1e-30 136.7 99 66.7
BcaB04g19617 Brassica carinata HOM05D005560 ORTHO05D006862 1.1e-30 136.7 99 66.7
A09p04870 Brassica napus HOM05D005560 ORTHO05D006862 1.1e-30 136.7 99 66.7
C09p05260 Brassica napus HOM05D005560 ORTHO05D006862 1.1e-30 136.7 99 66.7
BolC9t53453H Brassica oleracea HOM05D005560 ORTHO05D006862 1.1e-30 136.7 99 66.7
BcaC04g23733 Brassica carinata HOM05D005560 ORTHO05D006862 1.4e-30 136.3 99 66.7
CDE07G1301 Ceratophyllum demersum HOM05D005560 ORTHO05D006862 1.8e-30 136.0 79 81.0
Sed0013449 Sechium edule HOM05D005560 ORTHO05D006862 2.4e-30 135.6 91 70.3
Eucgr.F02752 Eucalyptus grandis HOM05D005560 ORTHO05D006862 3.1e-30 135.2 116 60.3
Lsat_1_v5_gn_3_139661 Lactuca sativa HOM05D005560 ORTHO05D006862 5.3e-30 134.4 90 74.4
SEGI_13216 Sequoiadendron giganteum HOM05D005560 ORTHO05D006862 5.3e-30 134.4 91 67.0
A06p38280 Brassica napus HOM05D005560 ORTHO05D006862 6.9e-30 134.0 91 70.3
CAN.G484.71 Capsicum annuum HOM05D005560 ORTHO05D006862 6.9e-30 134.0 94 68.1
Haze_01347 Corylus avellana HOM05D005560 ORTHO05D006862 9.0e-30 133.7 91 71.4
Zm00001eb295100 Zea mays HOM05D005560 ORTHO05D006862 9.0e-30 133.7 95 61.1
Zm00001eb343110 Zea mays HOM05D005560 ORTHO05D006862 9.0e-30 133.7 95 61.1
Gorai.011G202500 Gossypium raimondii HOM05D005560 ORTHO05D006862 1.2e-29 133.3 111 62.2
THA.LOC104818873 Tarenaya hassleriana HOM05D005560 ORTHO05D006862 2.6e-29 132.1 112 60.7
TWI53G0383 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 5.8e-29 131.0 83 71.1
Gorai.005G068700 Gossypium raimondii HOM05D005560 ORTHO05D006862 9.9e-29 130.2 137 54.0
ATR0598G271 Amborella trichopoda HOM05D005560 ORTHO05D006862 2.9e-28 128.6 95 67.4
SalBow8G4800 Salvia bowleyana HOM05D005560 ORTHO05D006862 2.9e-28 128.6 104 61.5
unitig_37.g12416 Utricularia gibba HOM05D005560 ORTHO05D007484 3.8e-28 128.3 94 62.8
Thecc.04G305600 Theobroma cacao HOM05D005560 ORTHO05D006862 6.4e-28 127.5 110 61.8
Migut.O00585 Erythranthe guttata HOM05D005560 ORTHO05D006862 1.9e-27 125.9 99 60.6
AUR62032779 Chenopodium quinoa HOM05D005560 ORTHO05D006862 1.6e-26 122.9 70 90.0
BraA06t26743Z Brassica rapa HOM05D005560 ORTHO05D006862 1.8e-25 119.4 91 63.7
Mapoly0008s0274 Marchantia polymorpha HOM05D005560 ORTHO05D006862 1.8e-25 119.4 91 57.1
SMO117G0178 Selaginella moellendorffii HOM05D005560 ORTHO05D006862 9.6e-24 113.6 88 59.1
AagrBONN_evm.TU.Sc2ySwM_362.2649 Anthoceros agrestis HOM05D005560 ORTHO05D006862 2.8e-23 112.1 107 50.5
Nitab4.5_0008521g0010 Nicotiana tabacum HOM05D005560 ORTHO05D006862 1.8e-22 109.4 70 75.7
Oeu052158.1 Olea europaea HOM05D005560 ORTHO05D006862 1.7e-20 102.8 107 54.2
AagrBONN_evm.TU.Sc2ySwM_340.65 Anthoceros agrestis HOM05D005560 ORTHO05D006862 4.2e-19 98.2 84 52.4
Nn8g41304 Nelumbo nucifera HOM05D005560 ORTHO05D006862 5.5e-19 97.8 62 77.4
arahy.Tifrunner.gnm1.ann1.CCFX3U Arachis hypogaea HOM05D001281 ORTHO05D001139 9.3e-19 97.1 91 58.2
MD01G1183100 Malus domestica HOM05D005560 ORTHO05D006862 9.3e-19 97.1 79 59.5
CBR_g22909 Chara braunii HOM05D005560 ORTHO05D006862 1.3e-17 93.2 85 48.2
Nn1g07816 Nelumbo nucifera HOM05D005560 ORTHO05D006862 2.8e-15 85.5 58 70.7
arahy.Tifrunner.gnm1.ann1.NI9QGM Arachis hypogaea HOM05D005560 ORTHO05D006862 1.7e-12 76.3 81 53.1
PRCOL_00001634 Prasinoderma coloniale HOM05D005560 ORTHO05D006862 2.2e-12 75.9 87 49.4
TWI73G0491 Tripterygium wilfordii HOM05D005560 ORTHO05D006862 4.2e-11 71.6 52 59.6
MCO06G009 Micromonas commoda HOM05D005560 ORTHO05D006862 4.8e-07 58.2 88 37.5


User provided reference genes

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