Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g071370 Amaranthus hybridus HOM05D007925 ORTHO05D009727 8.2e-118 427.2 231 100.0
AUR62039262 Chenopodium quinoa HOM05D007925 ORTHO05D009727 1.2e-44 184.1 227 51.5
AUR62016227 Chenopodium quinoa HOM05D007925 ORTHO05D009727 3.3e-34 149.4 182 54.4
Dinv44272 Davidia involucrata HOM05D007925 ORTHO05D009727 6.0e-20 102.1 230 35.7
Potri.008G103600 Populus trichocarpa HOM05D007925 ORTHO05D009727 1.5e-18 97.4 228 35.1
Cfa015292 Carpinus fangiana HOM05D007925 ORTHO05D009727 3.3e-18 96.3 202 37.1
QL12p029416 Quercus lobata HOM05D007925 ORTHO05D009727 5.6e-18 95.5 226 32.7
Manes.15G001100 Manihot esculenta HOM05D007925 ORTHO05D009727 7.4e-18 95.1 212 35.8
Ciclev10005876m.g Citrus clementina HOM05D007925 ORTHO05D009727 2.1e-17 93.6 232 31.9
Haze_01318 Corylus avellana HOM05D007925 ORTHO05D009727 4.8e-17 92.4 229 33.2
Haze_01320 Corylus avellana HOM05D007925 ORTHO05D009727 6.9e-16 88.6 180 34.4
Potri.012G102300 Populus trichocarpa HOM05D007925 ORTHO05D009727 1.2e-15 87.8 237 36.3
Gohir.A02G055200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 4.5e-15 85.9 214 33.2
Gohir.D02G060200 Gossypium hirsutum HOM05D007925 ORTHO05D009727 7.6e-15 85.1 215 32.6
Thecc.04G303500 Theobroma cacao HOM05D007925 ORTHO05D009727 1.3e-14 84.3 209 33.0
Gorai.005G067800 Gossypium raimondii HOM05D007925 ORTHO05D009727 2.2e-14 83.6 214 32.2
RcHm_v2.0_Chr4g0425771 Rosa chinensis HOM05D007925 ORTHO05D009727 2.9e-14 83.2 237 32.9
Atru.chr4.3043 Acer truncatum HOM05D007925 ORTHO05D009727 3.8e-14 82.8 209 33.5
Sc13g0006560 Simmondsia chinensis HOM05D007925 ORTHO05D009727 8.4e-14 81.6 105 41.0
Rhsim04G0240400 Rhododendron simsii HOM05D007925 ORTHO05D009727 1.9e-13 80.5 237 32.1
TAR633G0906 Trochodendron aralioides HOM05D007925 ORTHO05D009727 2.5e-13 80.1 212 30.7
CiPaw.02G073300 Carya illinoinensis HOM05D007925 ORTHO05D009727 3.2e-13 79.7 228 30.7
Prupe.1G115200 Prunus persica HOM05D007925 ORTHO05D009727 1.2e-12 77.8 235 30.2
FvH4_4g20280 Fragaria vesca HOM05D007925 ORTHO05D009727 1.6e-12 77.4 221 32.1
Nn4g25550 Nelumbo nucifera HOM05D007925 ORTHO05D009727 3.5e-12 76.3 251 27.5
Actinidia18460 Actinidia chinensis HOM05D007925 ORTHO05D009727 4.6e-12 75.9 218 28.4
COL.COLO4_34592 Corchorus olitorius HOM05D007925 ORTHO05D009727 4.6e-12 75.9 204 31.4
TWI09G1395 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 6.0e-12 75.5 209 34.0
TWI53G0957 Tripterygium wilfordii HOM05D007925 ORTHO05D009727 8.7e-11 71.6 232 30.6
FvH4_4g20350 Fragaria vesca HOM05D007925 ORTHO05D009727 1.5e-10 70.9 218 28.0
Nitab4.5_0007718g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 1.9e-10 70.5 216 32.4
FAN07G0172 Fragaria x ananassa HOM05D007925 ORTHO05D009727 3.3e-10 69.7 121 33.9
MD13G1151000 Malus domestica HOM05D007925 ORTHO05D009727 5.7e-10 68.9 154 33.8
Phvul.006G118800 Phaseolus vulgaris HOM05D007925 ORTHO05D009727 1.6e-09 67.4 235 31.1
FAN12G1072 Fragaria x ananassa HOM05D007925 ORTHO05D009727 2.8e-09 66.6 137 34.3
MD16G1151500 Malus domestica HOM05D007925 ORTHO05D009727 2.8e-09 66.6 124 36.3
Oeu063653.1 Olea europaea HOM05D007925 ORTHO05D009727 2.8e-09 66.6 240 29.2
arahy.Tifrunner.gnm1.ann1.BW1DTW Arachis hypogaea HOM05D007925 ORTHO05D009727 4.8e-09 65.9 184 28.8
Nitab4.5_0009429g0010 Nicotiana tabacum HOM05D007925 ORTHO05D009727 2.4e-08 63.5 209 32.1
arahy.Tifrunner.gnm1.ann1.8N1160 Arachis hypogaea HOM05D007925 ORTHO05D009727 3.1e-08 63.2 184 27.7
Glyma.09G034600 Glycine max HOM05D007925 ORTHO05D009727 3.1e-08 63.2 243 31.7
Sabra12G0074900 Salix brachista HOM05D007925 ORTHO05D009727 5.3e-08 62.4 125 35.2
ClCG06G004510 Citrullus lanatus HOM05D007925 ORTHO05D009727 9.0e-08 61.6 237 28.3
Solyc03g093980.2 Solanum lycopersicum HOM05D007925 ORTHO05D009727 3.4e-07 59.7 213 29.6
Sopen03g024830 Solanum pennellii HOM05D007925 ORTHO05D009727 5.9e-07 58.9 211 30.3
VMungo0540G0187 Vigna mungo HOM05D007925 ORTHO05D009727 1.0e-06 58.2 234 29.9
PGSC0003DMG400008341 Solanum tuberosum HOM05D007925 ORTHO05D009727 5.0e-06 55.8 190 26.3
Peaxi162Scf00935g00005 Petunia axillaris HOM05D007925 ORTHO05D009727 6.5e-06 55.5 132 27.3


User provided reference genes

Program Settings