Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g070730 Amaranthus hybridus HOM05D008613 ORTHO05D011237 2.0e-43 178.7 92 100.0
Ah.07g204750 Amaranthus hybridus HOM05D011561 ORTHO05D011237 4.5e-19 97.8 90 61.1
EL10Ac3g05185 Beta vulgaris HOM05D008837 ORTHO05D006961 4.4e-14 81.3 98 55.1
EL10Ac3g05184 Beta vulgaris HOM05D008613 ORTHO05D006961 8.6e-10 67.0 95 48.4
Ciclev10023060m.g Citrus clementina HOM05D008837 ORTHO05D006961 7.3e-09 63.9 93 46.2
Ciclev10017302m.g Citrus clementina HOM05D008837 ORTHO05D011237 1.0e-07 60.1 99 45.5
Nn1g00438 Nelumbo nucifera HOM05D008613 ORTHO05D006961 4.0e-07 58.2 90 41.1
Manes.05G197800 Manihot esculenta HOM05D008837 ORTHO05D011237 6.8e-07 57.4 91 42.9
Eucgr.A01407 Eucalyptus grandis HOM05D008837 ORTHO05D011237 1.2e-06 56.6 91 40.7
Nn3g18877 Nelumbo nucifera HOM05D031625 ORTHO05D006961 1.2e-06 56.6 93 44.1
Nn3g18879 Nelumbo nucifera HOM05D031625 ORTHO05D006961 1.2e-06 56.6 93 44.1
Sabra15G0003300 Salix brachista HOM05D008837 ORTHO05D006961 1.2e-06 56.6 90 40.0
DCAR_020368 Daucus carota HOM05D008837 ORTHO05D006961 2.0e-06 55.8 90 42.2
Ah.07g204740 Amaranthus hybridus HOM05D011561 ORTHO05D011237 2.6e-06 55.5 87 41.4
Cc00_g29530 Coffea canephora HOM05D008837 ORTHO05D011237 2.6e-06 55.5 112 36.6
Hma1.2p1_0415F.1_g148160 Hydrangea macrophylla HOM05D008837 ORTHO05D006961 2.6e-06 55.5 96 43.8
Thecc.03G208100 Theobroma cacao HOM05D018669 ORTHO05D011237 2.6e-06 55.5 90 43.3
Eucgr.A01409 Eucalyptus grandis HOM05D008837 ORTHO05D011237 3.4e-06 55.1 91 40.7
Potri.015G004800 Populus trichocarpa HOM05D008837 ORTHO05D011237 3.4e-06 55.1 91 41.8
Thhalv10015156m.g Eutrema salsugineum HOM05D011561 ORTHO05D011237 4.4e-06 54.7 91 42.9
THA.LOC104815392 Tarenaya hassleriana HOM05D008703 ORTHO05D006961 4.4e-06 54.7 92 39.1
COL.COLO4_14365 Corchorus olitorius HOM05D018669 ORTHO05D011237 5.7e-06 54.3 90 41.1
TAR629G3181 Trochodendron aralioides HOM05D008613 ORTHO05D006961 5.7e-06 54.3 93 40.9
Oeu023688.1 Olea europaea HOM05D008613 ORTHO05D006961 7.5e-06 53.9 88 42.0
Oeu061026.1 Olea europaea HOM05D008837 ORTHO05D006961 7.5e-06 53.9 92 40.2
ClCG01G001400 Citrullus lanatus HOM05D018156 ORTHO05D006961 9.8e-06 53.5 92 42.4


User provided reference genes

Program Settings