Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 1.9e-31 138.7 74 100.0
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 4.0e-26 120.9 74 89.2
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 2.0e-25 118.6 77 81.8
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 5.4e-23 110.5 96 66.7
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 8.7e-21 103.2 74 77.0
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 8.7e-21 103.2 72 73.6
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.9e-20 102.1 74 75.7
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 9.6e-20 99.8 74 74.3
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 1.3e-19 99.4 74 73.0
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 2.8e-19 98.2 74 73.0
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.6e-19 97.8 74 73.0
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 3.6e-19 97.8 74 73.0
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 4.8e-19 97.4 74 73.0
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 4.8e-19 97.4 74 75.7
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 6.2e-19 97.1 74 74.3
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 8.1e-19 96.7 74 71.6
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 8.1e-19 96.7 66 74.2
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 8.1e-19 96.7 74 68.9
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 8.1e-19 96.7 66 74.2
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.1e-18 96.3 74 71.6
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 1.1e-18 96.3 74 71.6
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 1.1e-18 96.3 66 72.7
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 1.4e-18 95.9 66 72.7
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 1.4e-18 95.9 74 70.3
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 1.8e-18 95.5 74 67.6
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 1.8e-18 95.5 74 70.3
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.8e-18 95.5 74 70.3
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.8e-18 95.5 74 70.3
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 2.4e-18 95.1 74 70.3
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 2.4e-18 95.1 74 70.3
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 3.1e-18 94.7 74 67.6
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 3.1e-18 94.7 66 72.7
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 3.1e-18 94.7 74 71.6
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 4.0e-18 94.4 74 67.6
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 4.0e-18 94.4 74 67.6
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 4.0e-18 94.4 74 67.6
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 4.0e-18 94.4 74 67.6
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 4.0e-18 94.4 74 70.3
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 4.0e-18 94.4 66 71.2
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 4.0e-18 94.4 74 70.3
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 5.3e-18 94.0 74 70.3
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 5.3e-18 94.0 74 68.9
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 6.9e-18 93.6 74 67.6
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 6.9e-18 93.6 65 72.3
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 6.9e-18 93.6 74 68.9
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 6.9e-18 93.6 69 71.0
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 6.9e-18 93.6 73 72.6
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 9.0e-18 93.2 74 70.3
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 1.5e-17 92.4 74 66.2
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 1.5e-17 92.4 74 68.9
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 1.5e-17 92.4 66 72.7
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 2.6e-17 91.7 66 69.7
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 2.6e-17 91.7 74 67.6
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 2.6e-17 91.7 74 68.9
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 3.4e-17 91.3 72 68.1
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 4.5e-17 90.9 74 67.6
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 5.8e-17 90.5 74 64.9
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 5.8e-17 90.5 74 64.9
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 5.8e-17 90.5 74 64.9
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.8e-17 90.5 74 67.6
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 5.8e-17 90.5 74 68.9
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 5.8e-17 90.5 73 67.1
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 5.8e-17 90.5 66 71.2
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 5.8e-17 90.5 74 64.9
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 7.6e-17 90.1 74 67.6
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 7.6e-17 90.1 74 64.9
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 1.3e-16 89.4 74 64.9
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.3e-16 89.4 73 64.4
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 1.7e-16 89.0 67 67.2
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 2.2e-16 88.6 72 68.1
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 2.9e-16 88.2 74 67.6
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 2.9e-16 88.2 74 66.2
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 2.9e-16 88.2 74 63.5
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 3.8e-16 87.8 74 63.5
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 3.8e-16 87.8 63 71.4
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 3.8e-16 87.8 74 64.9
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 4.9e-16 87.4 74 67.6
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 4.9e-16 87.4 74 63.5
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 8.4e-16 86.7 74 67.6
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 8.4e-16 86.7 74 68.9
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 1.1e-15 86.3 74 66.2
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 1.1e-15 86.3 74 63.5
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 1.4e-15 85.9 100 55.0
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 1.4e-15 85.9 74 63.5
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 2.4e-15 85.1 63 65.1
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 3.2e-15 84.7 74 64.9
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 4.2e-15 84.3 74 63.5
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 7.1e-15 83.6 70 67.1
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 9.3e-15 83.2 74 63.5
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 9.3e-15 83.2 89 57.3
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 1.6e-14 82.4 74 60.8
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 1.6e-14 82.4 74 62.2
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.1e-14 82.0 74 66.2
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 2.7e-14 81.6 72 63.9
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 3.5e-14 81.3 72 61.1
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 3.5e-14 81.3 44 93.2
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 3.5e-14 81.3 74 62.2
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 4.6e-14 80.9 74 62.2
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 1.0e-13 79.7 66 63.6
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 2.3e-13 78.6 74 64.9
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 8.7e-13 76.6 74 62.2
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 2.5e-12 75.1 74 55.4
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 3.3e-12 74.7 73 53.4
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 1.6e-11 72.4 73 54.8
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 2.8e-11 71.6 133 39.1
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 6.2e-11 70.5 74 60.8
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 6.2e-11 70.5 78 51.3
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 8.1e-11 70.1 70 57.1
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 1.1e-10 69.7 64 59.4
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 1.4e-10 69.3 71 56.3
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.8e-10 68.9 43 74.4
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 5.3e-10 67.4 45 73.3
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.4e-09 64.7 69 53.6
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.4e-09 64.7 43 72.1
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 1.0e-08 63.2 54 66.7
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.3e-08 62.8 42 76.2
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 1.7e-08 62.4 143 37.1
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 2.9e-08 61.6 106 41.5
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 3.8e-08 61.2 41 73.2
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 4.9e-08 60.8 39 82.1
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 6.5e-08 60.5 42 66.7
Zm00001eb294050 Zea mays HOM05D006482 ORTHO05D008149 1.4e-07 59.3 58 55.2
Eucgr.E02459 Eucalyptus grandis HOM05D006482 ORTHO05D008149 2.1e-06 55.5 56 57.1
Zm00001eb160720 Zea mays HOM05D006482 ORTHO05D008149 3.5e-06 54.7 68 45.6


User provided reference genes

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