Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g069840 Amaranthus hybridus HOM05D005459 ORTHO05D006751 4.5e-92 341.3 174 100.0
EL10Ac3g05347 Beta vulgaris HOM05D005459 ORTHO05D006751 1.8e-53 213.0 157 68.8
AUR62006152 Chenopodium quinoa HOM05D005459 ORTHO05D006751 1.2e-52 210.3 183 65.0
AUR62019336 Chenopodium quinoa HOM05D005459 ORTHO05D006751 3.2e-50 202.2 183 61.7
Hund04829 Selenicereus undatus HOM05D005459 ORTHO05D006751 3.7e-38 162.2 182 51.1
Sc13g0009600 Simmondsia chinensis HOM05D005459 ORTHO05D006751 8.5e-35 151.0 154 53.9
SGA_v2.0_scaffold55G19735 Striga asiatica HOM05D005459 ORTHO05D006751 3.2e-34 149.1 161 52.2
Rhsim09G0203700 Rhododendron simsii HOM05D005459 ORTHO05D006751 2.7e-33 146.0 162 51.9
TWI39G1077 Tripterygium wilfordii HOM05D005459 ORTHO05D006751 1.0e-32 144.1 166 48.8
Haze_00111 Corylus avellana HOM05D005459 ORTHO05D006751 1.8e-32 143.3 162 51.2
Cfa016362 Carpinus fangiana HOM05D005459 ORTHO05D006751 3.0e-32 142.5 157 52.2
COL.COLO4_35657 Corchorus olitorius HOM05D005459 ORTHO05D006751 3.0e-32 142.5 160 50.0
Dinv28337 Davidia involucrata HOM05D005459 ORTHO05D006751 3.0e-32 142.5 165 50.3
Nitab4.5_0004934g0010 Nicotiana tabacum HOM05D005459 ORTHO05D006751 4.0e-32 142.1 158 50.6
vmacro10106 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 5.2e-32 141.7 159 50.9
GSVIVG01028720001 Vitis vinifera HOM05D005459 ORTHO05D006751 5.2e-32 141.7 165 49.1
CSS0021725 Camellia sinensis var. sinensis HOM05D005459 ORTHO05D006751 6.8e-32 141.4 188 48.4
Lalb_Chr10g0091331 Lupinus albus HOM05D005459 ORTHO05D006751 1.5e-31 140.2 182 45.6
Sopen06g017930 Solanum pennellii HOM05D005459 ORTHO05D006751 7.5e-31 137.9 158 48.1
Lj6g0006101 Lotus japonicus HOM05D005459 ORTHO05D006751 9.8e-31 137.5 166 47.0
Solyc06g051900.3 Solanum lycopersicum HOM05D005459 ORTHO05D006751 1.7e-30 136.7 158 47.5
Gohir.D12G252700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 3.7e-30 135.6 170 47.6
Gohir.D12G253700 Gossypium hirsutum HOM05D005459 ORTHO05D006751 3.7e-30 135.6 170 47.6
Gorai.008G270800 Gossypium raimondii HOM05D005459 ORTHO05D006751 3.7e-30 135.6 170 47.6
Prupe.2G307100 Prunus persica HOM05D005459 ORTHO05D006751 3.7e-30 135.6 173 43.9
CANSAT64G0927 Cannabis sativa HOM05D005459 ORTHO05D006751 4.8e-30 135.2 164 48.8
Potri.015G022400 Populus trichocarpa HOM05D005459 ORTHO05D006751 4.8e-30 135.2 155 49.0
PGSC0003DMG400002352 Solanum tuberosum HOM05D005459 ORTHO05D006751 4.8e-30 135.2 158 46.8
QL09p010988 Quercus lobata HOM05D005459 ORTHO05D006751 6.3e-30 134.8 174 47.7
Cc02_g01880 Coffea canephora HOM05D005459 ORTHO05D006751 1.1e-29 134.0 162 48.1
PGR142G2821 Punica granatum HOM05D005459 ORTHO05D006751 1.1e-29 134.0 177 45.8
Cpa.g.sc3.50 Carica papaya HOM05D005459 ORTHO05D006751 1.4e-29 133.7 154 49.4
TAR629G0715 Trochodendron aralioides HOM05D005459 ORTHO05D006751 1.4e-29 133.7 173 47.4
Thecc.03G192700 Theobroma cacao HOM05D005459 ORTHO05D006751 2.4e-29 132.9 163 47.9
Hma1.2p1_0327F.1_g126730 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 4.1e-29 132.1 151 49.0
CAN.G589.10 Capsicum annuum HOM05D005459 ORTHO05D006751 5.4e-29 131.7 158 46.8
VMungo0647G0840 Vigna mungo HOM05D005459 ORTHO05D006751 7.0e-29 131.3 163 46.6
Sabra15G0016700 Salix brachista HOM05D005459 ORTHO05D006751 9.1e-29 131.0 156 46.8
MBI06_g32757_MAGBIO Magnolia biondii HOM05D005459 ORTHO05D006751 1.2e-28 130.6 176 44.9
SHI02435 Sapria himalayana HOM05D005459 ORTHO05D006751 1.2e-28 130.6 153 49.0
Peaxi162Scf00618g00514 Petunia axillaris HOM05D005459 ORTHO05D006751 1.6e-28 130.2 161 48.4
CAN.G394.13 Capsicum annuum HOM05D005459 ORTHO05D006751 2.7e-28 129.4 152 47.4
Migut.F01051 Erythranthe guttata HOM05D005459 ORTHO05D006751 3.5e-28 129.0 157 47.1
FvH4_7g31010 Fragaria vesca HOM05D005459 ORTHO05D006751 1.0e-27 127.5 162 44.4
FAN06G0889 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.0e-27 127.5 162 44.4
FAN06G3802 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.0e-27 127.5 162 44.4
FAN10G1158 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.3e-27 127.1 161 43.5
Duzib084G0355 Durio zibethinus HOM05D005459 ORTHO05D006751 1.7e-27 126.7 167 46.1
FAN10G1104 Fragaria x ananassa HOM05D005459 ORTHO05D006751 1.7e-27 126.7 160 43.1
MD07G1285000 Malus domestica HOM05D005459 ORTHO05D006751 2.9e-27 125.9 159 42.8
Nn3g17990 Nelumbo nucifera HOM05D005459 ORTHO05D006751 2.9e-27 125.9 165 45.5
ClCG05G008710 Citrullus lanatus HOM05D005459 ORTHO05D006751 8.6e-27 124.4 161 44.1
FAN01G1429 Fragaria x ananassa HOM05D005459 ORTHO05D006751 8.6e-27 124.4 161 42.9
Lsat_1_v5_gn_2_134221 Lactuca sativa HOM05D005459 ORTHO05D006751 1.1e-26 124.0 157 45.2
TPR.G33293 Trifolium pratense HOM05D005459 ORTHO05D006751 1.5e-26 123.6 160 46.2
RcHm_v2.0_Chr1g0380091 Rosa chinensis HOM05D005459 ORTHO05D006751 1.9e-26 123.2 175 41.1
Sed0000581 Sechium edule HOM05D005459 ORTHO05D006751 1.9e-26 123.2 158 44.9
Psat6g038640 Pisum sativum HOM05D005459 ORTHO05D006751 5.5e-26 121.7 160 45.6
Lj3C911T3 Lonicera japonica HOM05D005459 ORTHO05D006751 1.2e-25 120.6 156 44.9
Ca_12679_v3 Cicer arietinum L. HOM05D005459 ORTHO05D006751 6.1e-25 118.2 160 45.6
Manes.06G157100 Manihot esculenta HOM05D005459 ORTHO05D006751 6.1e-25 118.2 165 43.0
Medtr1g028510 Medicago truncatula HOM05D005459 ORTHO05D006751 6.1e-25 118.2 174 41.4
unitig_578.g16671 Utricularia gibba HOM05D005459 ORTHO05D006751 6.1e-25 118.2 160 43.1
CDE02G4072 Ceratophyllum demersum HOM05D005459 ORTHO05D006751 8.0e-25 117.9 164 43.3
HanXRQChr14g0462841 Helianthus annuus HOM05D005459 ORTHO05D006751 8.0e-25 117.9 156 42.9
PSO384G0956 Papaver somniferum HOM05D005459 ORTHO05D006751 8.0e-25 117.9 168 43.5
THA.LOC104813180 Tarenaya hassleriana HOM05D005459 ORTHO05D006751 8.0e-25 117.9 156 46.8
Sp7g00510 Schrenkiella parvula HOM05D005459 ORTHO05D006751 1.0e-24 117.5 172 43.6
Glyma.10G065800 Glycine max HOM05D005459 ORTHO05D006751 1.8e-24 116.7 165 43.6
SalBow2G0671 Salvia bowleyana HOM05D005459 ORTHO05D006751 3.0e-24 115.9 158 43.7
BolC7t43505H Brassica oleracea HOM05D005459 ORTHO05D006751 4.0e-24 115.5 173 42.2
CsaV3_3G021950 Cucumis sativus L. HOM05D005459 ORTHO05D006751 5.2e-24 115.2 149 46.3
arahy.Tifrunner.gnm1.ann1.7I62GA Arachis hypogaea HOM05D005459 ORTHO05D006751 6.8e-24 114.8 167 43.7
arahy.Tifrunner.gnm1.ann1.QW5IMS Arachis hypogaea HOM05D005459 ORTHO05D006751 6.8e-24 114.8 167 43.1
PSO135G0062 Papaver somniferum HOM05D005459 ORTHO05D006751 8.9e-24 114.4 168 42.3
BcaC06g31482 Brassica carinata HOM05D005459 ORTHO05D006751 1.5e-23 113.6 172 40.7
A06p46000 Brassica napus HOM05D005459 ORTHO05D006751 2.6e-23 112.8 173 41.6
BraA06t27464Z Brassica rapa HOM05D005459 ORTHO05D006751 2.6e-23 112.8 173 41.6
DCAR_024416 Daucus carota HOM05D005459 ORTHO05D006751 3.4e-23 112.5 155 44.5
Ciclev10007115m.g Citrus clementina HOM05D005459 ORTHO05D006751 7.5e-23 111.3 166 41.0
C07p29540 Brassica napus HOM05D005459 ORTHO05D006751 1.7e-22 110.2 172 40.1
Aqoxy7G00148 Aquilegia oxysepala HOM05D005459 ORTHO05D006751 2.2e-22 109.8 170 41.8
Thhalv10027718m.g Eutrema salsugineum HOM05D005459 ORTHO05D006751 2.8e-22 109.4 172 41.9
Glyma.14G160851 Glycine max HOM05D005459 ORTHO05D006751 8.3e-22 107.8 154 42.9
AT5G41480 Arabidopsis thaliana HOM05D005459 ORTHO05D006751 1.1e-21 107.5 155 45.2
HPP92_026772 Vanilla planifolia HOM05D005459 ORTHO05D006751 1.1e-21 107.5 176 40.3
Eucgr.K00329 Eucalyptus grandis HOM05D005459 ORTHO05D006751 2.4e-21 106.3 163 39.9
Os12g0623800 Oryza sativa ssp. japonica HOM05D005459 ORTHO05D006751 5.4e-21 105.1 170 38.8
ECA246G1562 Erigeron canadensis HOM05D005459 ORTHO05D006751 7.0e-21 104.8 145 40.0
Carub.0007s3402 Capsella rubella HOM05D005459 ORTHO05D006751 9.2e-21 104.4 173 41.0
Medtr7g100937 Medicago truncatula HOM05D005459 ORTHO05D006751 1.6e-20 103.6 142 43.7
AL7G47930 Arabidopsis lyrata HOM05D005459 ORTHO05D006751 4.5e-20 102.1 173 38.7
Zm00001eb410070 Zea mays HOM05D005459 ORTHO05D006751 7.8e-20 101.3 164 38.4
ATR0661G386 Amborella trichopoda HOM05D005459 ORTHO05D006751 2.9e-19 99.4 166 37.3
Aa31LG9G520 Aethionema arabicum HOM05D005459 ORTHO05D006751 4.3e-18 95.5 158 37.3
CiPaw.06G007500 Carya illinoinensis HOM05D005459 ORTHO05D006751 5.6e-18 95.1 95 52.6
Hma1.2p1_0327F.1_g126720 Hydrangea macrophylla HOM05D005459 ORTHO05D006751 9.5e-18 94.4 94 52.1
FAN03G0338 Fragaria x ananassa HOM05D005459 ORTHO05D006751 2.1e-17 93.2 161 36.6
Atru.chr1.246 Acer truncatum HOM05D005459 ORTHO05D006751 6.8e-16 88.2 84 52.4
Mapoly0084s0006 Marchantia polymorpha HOM05D005459 ORTHO05D006751 3.7e-14 82.4 168 35.1
vmacro20553 Vaccinium macrocarpon HOM05D005459 ORTHO05D006751 4.9e-14 82.0 75 54.7
SEGI_13502 Sequoiadendron giganteum HOM05D005459 ORTHO05D006751 2.4e-13 79.7 165 32.1
Phvul.001G060700 Phaseolus vulgaris HOM05D005459 ORTHO05D006751 6.6e-11 71.6 118 38.1
SMO118G0218 Selaginella moellendorffii HOM05D005459 ORTHO05D006751 7.3e-10 68.2 151 32.5
Pp3c1_19310 Physcomitrium patens HOM05D005459 ORTHO05D006751 1.2e-09 67.4 118 33.9
Dinv35306 Davidia involucrata HOM05D005459 ORTHO05D006751 1.6e-09 67.0 159 32.7
Actinidia03157 Actinidia chinensis HOM05D005459 ORTHO05D006751 5.2e-08 62.0 52 61.5
CBR_g49195 Chara braunii HOM05D005459 ORTHO05D006751 5.2e-08 62.0 75 40.0
CARHR213570 Cardamine hirsuta HOM05D005459 ORTHO05D006751 1.5e-07 60.5 76 47.4
Atru.chr1.247 Acer truncatum HOM05D005459 ORTHO05D006751 2.2e-06 56.6 52 53.8
Actinidia31865 Actinidia chinensis HOM05D005459 ORTHO05D006751 2.9e-06 56.2 95 38.9


User provided reference genes

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