Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g069570 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.8e-119 430.3 211 100.0
Ah.13g073740 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.3e-81 305.1 198 76.8
Ah.02g117860 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.8e-75 284.3 237 64.1
Ah.05g175000 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.2e-70 270.4 271 55.4
Ah.05g176570 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.0e-70 269.6 301 51.8
Ah.11g044780 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.8e-70 268.1 301 50.8
Ah.10g030780 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.4e-68 261.5 302 51.0
Ah.05g172940 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.4e-57 224.6 249 51.8
Ah.05g173030 Amaranthus hybridus HOM05D002461 ORTHO05D000898 9.6e-57 224.2 273 47.6
Ah.02g117970 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.1e-56 221.1 305 43.9
Ah.02g123850 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.5e-54 215.3 255 49.8
Ah.14g080610 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.6e-54 214.5 279 45.9
Ah.16g110300 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.0e-53 214.2 275 46.9
Ah.15g098990 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.2e-52 208.8 296 42.9
Ah.07g196560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.7e-50 201.1 311 40.8
Ah.02g119150 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.1e-49 200.7 121 82.6
Ah.14g080440 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-49 200.3 311 40.8
Ah.05g174440 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-42 177.2 122 72.1
Ah.16g107710 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.3e-41 172.6 122 71.3
Ah.01g012310 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.1e-33 147.5 80 91.2
Ah.14g078970 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-33 147.1 86 88.4
Ah.06g183710 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.4e-25 118.2 74 75.7
Ah.11g042210 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-22 110.5 72 75.0
Ah.10g026610 Amaranthus hybridus HOM05D002461 ORTHO05D000898 2.3e-18 96.7 126 42.1
Ah.02g122330 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.8e-18 94.7 127 41.7
Ah.08g221620 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.8e-18 94.7 127 41.7
Ah.08g221640 Amaranthus hybridus HOM05D002461 ORTHO05D000898 8.8e-18 94.7 127 41.7
Ah.07g201510 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.5e-17 94.0 127 41.7
Ah.05g174110 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.4e-17 92.4 130 40.0
Ah.13g067560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 9.7e-17 91.3 47 95.7
Ah.09g226000 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-16 90.9 126 39.7
Ah.11g044790 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.7e-16 89.4 128 39.1
Ah.09g227720 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.8e-16 89.0 126 39.7
Ah.07g198020 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.3e-16 88.6 45 97.8
Ah.14g080190 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.3e-16 88.6 108 42.6
Ah.14g088400 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.1e-15 87.8 46 95.7
Ah.07g198850 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.4e-15 87.4 122 41.0
Ah.01g010610 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.8e-15 87.0 125 39.2
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 1.2e-14 84.3 108 41.7
Ah.07g201750 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.3e-13 80.9 127 38.6
Ah.09g227120 Amaranthus hybridus HOM05D002461 ORTHO05D000898 6.5e-13 78.6 47 80.9
Ah.14g080250 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-11 73.9 38 94.7
Ah.01g012550 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.0e-10 71.2 70 42.9
Ah.05g173700 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.0e-10 71.2 86 43.0
Ah.06g183730 Amaranthus hybridus HOM05D002461 ORTHO05D000898 5.7e-09 65.5 129 33.3
Ah.02g118270 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.7e-08 63.9 122 34.4
Ah.04g160560 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.1e-07 61.2 107 33.6
Ah.02g119810 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.1e-07 59.3 75 41.3
Ah.04g157760 Amaranthus hybridus HOM05D002461 ORTHO05D000898 4.1e-07 59.3 78 41.0
AUR62018099 Chenopodium quinoa HOM05D002461 ORTHO05D000898 5.4e-07 58.9 157 28.0
AUR62039973 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.0e-07 58.5 150 28.0
AUR62000408 Chenopodium quinoa HOM05D002461 ORTHO05D000898 9.1e-07 58.2 164 28.0
Ah.04g157770 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.2e-06 57.8 83 33.7
Ah.07g200980 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.2e-06 57.8 75 40.0
Ah.01g012540 Amaranthus hybridus HOM05D002461 ORTHO05D000898 1.6e-06 57.4 59 49.2
Ah.01g009830 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.5e-06 56.2 57 42.1
Ah.10g029880 Amaranthus hybridus HOM05D002461 ORTHO05D000898 3.5e-06 56.2 74 37.8
Ah.15g099800 Amaranthus hybridus HOM05D002461 ORTHO05D000898 7.7e-06 55.1 78 37.2
AUR62025505 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.7e-06 55.1 166 27.7


User provided reference genes

Program Settings