Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g068980 Amaranthus hybridus HOM05D051354 ORTHO05D038195 4.2e-113 411.4 210 100.0
Ah.14g079570 Amaranthus hybridus HOM05D051354 ORTHO05D038195 4.1e-23 112.5 61 91.8
TWI74G1678 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.0e-18 97.8 99 51.5
CSS0009906 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.9e-12 77.0 96 43.8
CSS0021554 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-11 74.3 96 41.7
CSS0043289 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.2e-11 74.3 96 41.7
CSS0013777 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.1e-11 73.6 96 41.7
CSS0014451 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-11 73.2 96 41.7
CSS0018298 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 2.7e-11 73.2 96 41.7
MBI19_g18418_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 2.7e-11 73.2 111 39.6
CSS0030837 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.7e-11 72.4 96 41.7
CSS0048713 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 7.9e-11 71.6 96 40.6
Nitab4.5_0000898g0140 Nicotiana tabacum HOM05D001309 ORTHO05D000385 1.0e-10 71.2 156 34.0
CSS0023291 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 1.4e-10 70.9 96 40.6
TAR541G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.4e-10 70.9 212 32.1
Nn7g37794 Nelumbo nucifera HOM05D000107 ORTHO05D000062 1.8e-10 70.5 156 32.7
EL10Ac4g08961 Beta vulgaris HOM05D000107 ORTHO05D000062 3.0e-10 69.7 98 45.9
Atru.chr3.1416 Acer truncatum HOM05D000107 ORTHO05D000062 5.1e-10 68.9 164 33.5
EL10Ac9g22338 Beta vulgaris HOM05D000107 ORTHO05D000062 5.1e-10 68.9 98 44.9
EL10Ac7g17545 Beta vulgaris HOM05D000107 ORTHO05D000062 8.8e-10 68.2 97 44.3
Rhsim11G0004800 Rhododendron simsii HOM05D000107 ORTHO05D000062 8.8e-10 68.2 110 38.2
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-09 67.8 98 44.9
EL10Ac3g05959 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-09 67.4 98 44.9
EL10Ac5g12063 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-09 67.4 98 44.9
EL10Ac8g19672 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-09 67.4 98 44.9
EL10Ac8g20048 Beta vulgaris HOM05D000107 ORTHO05D000062 1.5e-09 67.4 98 44.9
Rhsim06G0085100 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.5e-09 67.4 117 35.0
Rhsim02G0220700 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-09 67.0 117 35.0
Rhsim08G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.0e-09 67.0 117 35.0
EL10Ac8g19534 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-09 66.6 98 44.9
EL10Ac9g21234 Beta vulgaris HOM05D000107 ORTHO05D000062 4.4e-09 65.9 97 42.3
Atru.chr1.768 Acer truncatum HOM05D000107 ORTHO05D000062 5.7e-09 65.5 222 27.0
Psat2g020120 Pisum sativum HOM05D002954 ORTHO05D000062 5.7e-09 65.5 103 34.0
ECA232G4413 Erigeron canadensis HOM05D000107 ORTHO05D000062 7.4e-09 65.1 218 30.3
Sopen11g015850 Solanum pennellii HOM05D000107 ORTHO05D000062 1.3e-08 64.3 106 34.0
EL10Ac3g06228 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-08 63.9 98 41.8
EL10As28g24252 Beta vulgaris HOM05D000107 ORTHO05D000062 1.7e-08 63.9 149 35.6
EL10Ac2g03369 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-08 63.5 97 41.2
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 2.2e-08 63.5 94 43.6
EL10Ac4g08867 Beta vulgaris HOM05D001385 ORTHO05D008760 2.8e-08 63.2 98 41.8
Rhsim01G0079200 Rhododendron simsii HOM05D000107 ORTHO05D000062 4.8e-08 62.4 159 27.7
EL10Ac1g01187 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-08 62.0 97 40.2
EL10Ac4g08837 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-08 62.0 81 42.0
EL10Ac9g20977 Beta vulgaris HOM05D000107 ORTHO05D000062 6.3e-08 62.0 97 40.2
Solyc05g042155.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 6.3e-08 62.0 106 34.0
PGSC0003DMG400011670 Solanum tuberosum HOM05D000107 ORTHO05D000062 6.3e-08 62.0 107 36.4
Lj1g0012478 Lotus japonicus HOM05D000107 ORTHO05D000062 8.2e-08 61.6 112 34.8
Os01g0768600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 8.2e-08 61.6 98 40.8
Os02g0543900 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 8.2e-08 61.6 99 38.4
Os12g0544600 Oryza sativa ssp. japonica HOM05D000107 ORTHO05D000062 8.2e-08 61.6 98 40.8
ECA238G0623 Erigeron canadensis HOM05D000107 ORTHO05D000001 1.1e-07 61.2 122 35.2
EL10Ac2g03906 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-07 60.8 90 42.2
EL10Ac4g09022 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-07 60.8 90 42.2
EL10Ac6g14098 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-07 60.8 90 42.2
EL10Ac7g17195 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-07 60.8 90 42.2
EL10Ac9g21093 Beta vulgaris HOM05D000107 ORTHO05D000062 1.4e-07 60.8 90 42.2
Nitab4.5_0007523g0040 Nicotiana tabacum HOM05D000107 ORTHO05D000062 1.4e-07 60.8 98 40.8
CANSAT78G2036 Cannabis sativa HOM05D000107 ORTHO05D000062 1.8e-07 60.5 100 37.0
HanXRQChr03g0071531 Helianthus annuus HOM05D000107 ORTHO05D000062 1.8e-07 60.5 109 36.7
HanXRQChr05g0141801 Helianthus annuus HOM05D000107 ORTHO05D000062 1.8e-07 60.5 109 36.7
TWI34G0033 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.8e-07 60.5 103 37.9
TWI73G1301 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 1.8e-07 60.5 103 37.9
EL10Ac1g01130 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-07 60.1 90 42.2
EL10As6g23683 Beta vulgaris HOM05D000107 ORTHO05D000062 2.4e-07 60.1 97 39.2
Rhsim05G0137300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 164 29.9
Sopen03g018530 Solanum pennellii HOM05D000004 ORTHO05D009932 2.4e-07 60.1 100 34.0
Sopen06g007740 Solanum pennellii HOM05D000107 ORTHO05D000062 2.4e-07 60.1 100 36.0
Sopen12g016210 Solanum pennellii HOM05D000107 ORTHO05D009932 2.4e-07 60.1 100 34.0
PSO478G1847 Papaver somniferum HOM05D000107 ORTHO05D000062 3.1e-07 59.7 105 36.2
PSO541G6361 Papaver somniferum HOM05D000107 ORTHO05D000062 3.1e-07 59.7 105 36.2
PSO729G0121 Papaver somniferum HOM05D000107 ORTHO05D000062 3.1e-07 59.7 105 36.2
PSO781G0150 Papaver somniferum HOM05D000107 ORTHO05D000062 3.1e-07 59.7 105 36.2
Rhsim01G0104600 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.1e-07 59.7 164 30.5
Sopen09g018620 Solanum pennellii HOM05D000107 ORTHO05D009932 3.1e-07 59.7 100 34.0
Sopen09g019850 Solanum pennellii HOM05D000107 ORTHO05D000062 3.1e-07 59.7 100 34.0
Sopen10g014350 Solanum pennellii HOM05D000107 ORTHO05D000062 3.1e-07 59.7 100 34.0
TWI79G1319 Tripterygium wilfordii HOM05D000107 ORTHO05D000062 3.1e-07 59.7 119 32.8
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 4.1e-07 59.3 108 38.0
MBI13_g30130_MAGBIO Magnolia biondii HOM05D000107 ORTHO05D000062 4.1e-07 59.3 88 39.8
Sopen01g017910 Solanum pennellii HOM05D000107 ORTHO05D000062 4.1e-07 59.3 100 34.0
Psat0s2381g0040 Pisum sativum HOM05D000107 ORTHO05D000062 5.3e-07 58.9 103 34.0
Psat0s472g0040 Pisum sativum HOM05D000107 ORTHO05D000062 5.3e-07 58.9 103 34.0
SGA_v2.0_scaffold174G39225 Striga asiatica HOM05D000107 ORTHO05D000062 5.3e-07 58.9 97 39.2
EL10Ac8g19894 Beta vulgaris HOM05D000107 ORTHO05D000062 7.0e-07 58.5 60 50.0
AUR62040738 Chenopodium quinoa HOM05D000107 ORTHO05D000062 7.0e-07 58.5 171 26.3
EL10Ac3g06412 Beta vulgaris HOM05D000107 ORTHO05D000062 9.1e-07 58.2 93 39.8
EL10Ac5g11735 Beta vulgaris HOM05D000107 ORTHO05D000062 9.1e-07 58.2 90 43.3
AUR62016348 Chenopodium quinoa HOM05D000107 ORTHO05D000062 9.1e-07 58.2 98 40.8
ECA234G2344 Erigeron canadensis HOM05D000107 ORTHO05D000062 9.1e-07 58.2 117 35.0
Rhsim01G0081600 Rhododendron simsii HOM05D000107 ORTHO05D000062 9.1e-07 58.2 158 27.2
Sopen01g009930 Solanum pennellii HOM05D000107 ORTHO05D000062 9.1e-07 58.2 100 33.0
Sopen08g007430 Solanum pennellii HOM05D000107 ORTHO05D000062 9.1e-07 58.2 92 35.9
EL10Ac5g11722 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-06 57.8 141 31.2
ECA246G3624 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.2e-06 57.8 117 35.0
Rhsim07G0167400 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.2e-06 57.8 158 27.2
Sopen09g024560 Solanum pennellii HOM05D000107 ORTHO05D000062 1.2e-06 57.8 100 34.0
ECA227G0003 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 117 34.2
ECA234G1212 Erigeron canadensis HOM05D000107 ORTHO05D000062 1.5e-06 57.4 109 34.9
TAR230G0002 Trochodendron aralioides HOM05D000107 ORTHO05D000062 1.5e-06 57.4 141 30.5
EL10Ac4g08893 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-06 57.0 60 50.0
EL10Ac6g14601 Beta vulgaris HOM05D000107 ORTHO05D000062 2.0e-06 57.0 90 38.9
AUR62036317 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.0e-06 57.0 90 40.0
ECA096G0002 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.0e-06 57.0 117 34.2
ECA236G2248 Erigeron canadensis HOM05D000107 ORTHO05D000062 2.0e-06 57.0 108 36.1
EL10Ac2g03191 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-06 56.6 153 29.4
EL10As2g23233 Beta vulgaris HOM05D000107 ORTHO05D000062 2.6e-06 56.6 91 40.7
AUR62038570 Chenopodium quinoa HOM05D000107 ORTHO05D000062 2.6e-06 56.6 95 41.1
QL05p061366 Quercus lobata HOM05D000107 ORTHO05D000062 2.6e-06 56.6 90 37.8
PGSC0003DMG400004420 Solanum tuberosum HOM05D000107 ORTHO05D000062 2.6e-06 56.6 90 41.1
CSS0044341 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 3.5e-06 56.2 96 35.4
TAR344G0006 Trochodendron aralioides HOM05D000107 ORTHO05D000062 3.5e-06 56.2 163 27.6
CSS0009480 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.5e-06 55.8 160 30.6
CSS0018002 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.5e-06 55.8 160 30.6
CSS0036122 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.5e-06 55.8 160 30.6
CSS0047073 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 4.5e-06 55.8 160 30.6
AUR62002657 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.5e-06 55.8 90 38.9
AUR62036640 Chenopodium quinoa HOM05D000107 ORTHO05D000062 4.5e-06 55.8 168 27.4
Lj4g0021587 Lotus japonicus HOM05D000107 ORTHO05D000062 4.5e-06 55.8 92 35.9
EL10Ac1g01516 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 97 37.1
EL10Ac2g03283 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 97 37.1
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 97 37.1
EL10Ac6g13842 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 100 36.0
EL10Ac7g16605 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 97 37.1
EL10Ac9g21156 Beta vulgaris HOM05D000107 ORTHO05D000062 5.9e-06 55.5 98 38.8
CSS0007472 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.9e-06 55.5 160 30.6
CSS0007710 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.9e-06 55.5 160 30.6
CSS0031171 Camellia sinensis var. sinensis HOM05D000107 ORTHO05D000062 5.9e-06 55.5 160 30.6
CANSAT11G2258 Cannabis sativa HOM05D000107 ORTHO05D000062 7.7e-06 55.1 100 34.0
Ca_13698_v3 Cicer arietinum L. HOM05D000107 ORTHO05D000062 7.7e-06 55.1 98 34.7
Solyc08g015837.1 Solanum lycopersicum HOM05D000107 ORTHO05D000062 7.7e-06 55.1 100 33.0


User provided reference genes

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