Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g068950 Amaranthus hybridus HOM05D000448 ORTHO05D000291 5.2e-176 621.7 530 100.0
Ah.13g068700 Amaranthus hybridus HOM05D000448 ORTHO05D000291 6.2e-44 183.0 192 85.9
EL10Ac2g04012 Beta vulgaris HOM05D000448 ORTHO05D000291 7.4e-13 79.7 193 63.2
AUR62043589 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.7e-12 77.4 192 62.0
AUR62044748 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.2e-12 76.6 191 61.8
AUR62041976 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.4e-11 75.5 191 60.7
EL10Ac2g03995 Beta vulgaris HOM05D000448 ORTHO05D000291 4.0e-11 73.9 109 56.9
EL10Ac2g04009 Beta vulgaris HOM05D000448 ORTHO05D000291 4.0e-11 73.9 115 52.2
AUR62009250 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.9e-11 73.2 191 49.2
EL10Ac2g03997 Beta vulgaris HOM05D000448 ORTHO05D000291 1.2e-10 72.4 69 49.3
Hund19515 Selenicereus undatus HOM05D000448 ORTHO05D000291 1.2e-10 72.4 109 56.0
AUR62025966 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.4e-10 70.9 104 57.7
AUR62044575 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.4e-10 70.9 69 47.8
AUR62044574 Chenopodium quinoa HOM05D000448 ORTHO05D000291 5.8e-10 70.1 69 47.8
Hund19573 Selenicereus undatus HOM05D000448 ORTHO05D000291 5.8e-10 70.1 109 52.3
AUR62009248 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.6e-10 69.7 74 41.9
AUR62043590 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.6e-10 69.7 69 46.4
AUR62024369 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.7e-09 68.6 108 55.6
Peaxi162Scf00565g00716 Petunia axillaris HOM05D000448 ORTHO05D000291 1.7e-09 68.6 72 47.2
Peaxi162Scf00565g00719 Petunia axillaris HOM05D000448 ORTHO05D000291 1.7e-09 68.6 72 47.2
Peaxi162Scf01938g00005 Petunia axillaris HOM05D000448 ORTHO05D000291 1.7e-09 68.6 72 47.2
EL10Ac2g03996 Beta vulgaris HOM05D000448 ORTHO05D000291 2.2e-09 68.2 69 44.9
AUR62041974 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.2e-09 68.2 69 47.8
AUR62009246 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.8e-09 67.4 69 46.4
AUR62043849 Chenopodium quinoa HOM05D000448 ORTHO05D000291 4.9e-09 67.0 65 44.6
AUR62043868 Chenopodium quinoa HOM05D000448 ORTHO05D000291 8.4e-09 66.2 69 42.0
AUR62009255 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.4e-08 65.5 199 26.6
EL10Ac2g03998 Beta vulgaris HOM05D000448 ORTHO05D000291 1.9e-08 65.1 68 47.1
CANSAT25G0679 Cannabis sativa HOM05D000448 ORTHO05D000291 1.9e-08 65.1 114 40.4
AUR62043586 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.1e-08 63.2 72 45.8
AUR62043857 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.1e-08 63.2 72 45.8
FAN06G0545 Fragaria x ananassa HOM05D000448 ORTHO05D000291 9.3e-08 62.8 73 38.4
Sc06g0006680 Simmondsia chinensis HOM05D000448 ORTHO05D000291 1.2e-07 62.4 69 40.6
AUR62009251 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.1e-07 61.6 77 39.0
FvH4_7g06240 Fragaria vesca HOM05D000448 ORTHO05D000291 2.1e-07 61.6 73 37.0
Sc06g0006700 Simmondsia chinensis HOM05D000448 ORTHO05D000291 2.1e-07 61.6 69 42.0
Solyc08g062360.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 2.1e-07 61.6 72 41.7
AUR62036647 Chenopodium quinoa HOM05D000448 ORTHO05D000291 2.7e-07 61.2 59 49.2
AUR62009260 Chenopodium quinoa HOM05D000448 ORTHO05D000291 3.5e-07 60.8 143 66.4
MELO3C011477.2 Cucumis melo HOM05D000448 ORTHO05D000291 4.6e-07 60.5 76 40.8
Hund18695 Selenicereus undatus HOM05D000448 ORTHO05D000291 4.6e-07 60.5 71 40.8
AUR62001505 Chenopodium quinoa HOM05D000448 ORTHO05D000291 6.0e-07 60.1 71 38.0
Atru.chr7.1898 Acer truncatum HOM05D000448 ORTHO05D000291 7.9e-07 59.7 69 43.5
CAN.G712.1 Capsicum annuum HOM05D000448 ORTHO05D000291 7.9e-07 59.7 72 41.7
AUR62043842 Chenopodium quinoa HOM05D000448 ORTHO05D000291 7.9e-07 59.7 149 64.4
ClCG00G004190 Citrullus lanatus HOM05D000448 ORTHO05D000291 7.9e-07 59.7 67 44.8
ClCG08G009940 Citrullus lanatus HOM05D000448 ORTHO05D000291 7.9e-07 59.7 67 44.8
CSS0031680 Camellia sinensis var. sinensis HOM05D000448 ORTHO05D000291 1.0e-06 59.3 71 45.1
Nitab4.5_0000286g0030 Nicotiana tabacum HOM05D000448 ORTHO05D000291 1.0e-06 59.3 70 41.4
AUR62001506 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 58.9 71 42.3
AUR62009247 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 58.9 59 49.2
AUR62009865 Chenopodium quinoa HOM05D000448 ORTHO05D000291 1.3e-06 58.9 71 36.6
Duzib150G0219 Durio zibethinus HOM05D000448 ORTHO05D000291 1.3e-06 58.9 75 36.0
Lj7C682G5 Lonicera japonica HOM05D000544 ORTHO05D000291 1.3e-06 58.9 72 38.9
Haze_08379 Corylus avellana HOM05D000480 ORTHO05D000313 1.8e-06 58.5 274 22.3
Nitab4.5_0007060g0010 Nicotiana tabacum HOM05D000480 ORTHO05D000313 1.8e-06 58.5 71 38.0
Thecc.09G081800 Theobroma cacao HOM05D000448 ORTHO05D000291 1.8e-06 58.5 69 37.7
CAN.G68.15 Capsicum annuum HOM05D000448 ORTHO05D000291 2.3e-06 58.2 72 40.3
Hma1.2p1_2969F.1_g331030 Hydrangea macrophylla HOM05D000480 ORTHO05D000313 2.3e-06 58.2 69 40.6
CANSAT25G2897 Cannabis sativa HOM05D000448 ORTHO05D000291 3.0e-06 57.8 70 41.4
Lj4A903G13 Lonicera japonica HOM05D000448 ORTHO05D000291 3.0e-06 57.8 72 36.1
Prupe.7G203800 Prunus persica HOM05D000448 ORTHO05D000291 3.0e-06 57.8 69 37.7
EL10Ac7g16388 Beta vulgaris HOM05D000448 ORTHO05D000291 3.9e-06 57.4 71 40.8
COL.COLO4_35174 Corchorus olitorius HOM05D000448 ORTHO05D000291 3.9e-06 57.4 69 42.0
FAN23G0378 Fragaria x ananassa HOM05D000544 ORTHO05D000291 3.9e-06 57.4 89 32.6
Sopen08g017880 Solanum pennellii HOM05D000448 ORTHO05D000291 3.9e-06 57.4 72 38.9
EL10Ac7g16389 Beta vulgaris HOM05D000448 ORTHO05D000291 5.1e-06 57.0 72 38.9
MELO3C011476.2 Cucumis melo HOM05D000448 ORTHO05D000291 5.1e-06 57.0 76 39.5
ECA234G4737 Erigeron canadensis HOM05D000448 ORTHO05D000291 6.7e-06 56.6 65 43.1
Glyma.19G171500 Glycine max HOM05D000448 ORTHO05D000291 6.7e-06 56.6 66 42.4
Solyc08g062330.3 Solanum lycopersicum HOM05D000448 ORTHO05D000291 6.7e-06 56.6 72 38.9
Sopen08g017860 Solanum pennellii HOM05D000448 ORTHO05D000291 6.7e-06 56.6 72 38.9
CANSAT25G2827 Cannabis sativa HOM05D000448 ORTHO05D000291 8.7e-06 56.2 63 36.5
Peaxi162Scf00565g00827 Petunia axillaris HOM05D000448 ORTHO05D000291 8.7e-06 56.2 73 39.7
Sabra13G0016100 Salix brachista HOM05D000480 ORTHO05D000313 8.7e-06 56.2 71 39.4
Sabra13G0016200 Salix brachista HOM05D000480 ORTHO05D000313 8.7e-06 56.2 71 39.4


User provided reference genes

Program Settings