Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g068510 Amaranthus hybridus HOM05D006981 ORTHO05D008719 1.4e-69 266.2 133 100.0
AUR62021209 Chenopodium quinoa HOM05D006981 ORTHO05D008719 2.0e-52 209.1 129 82.2
EL10Ac3g05672 Beta vulgaris HOM05D006981 ORTHO05D008719 4.5e-52 208.0 128 82.0
AUR62016001 Chenopodium quinoa HOM05D006981 ORTHO05D008719 4.5e-52 208.0 129 80.6
Hund11756 Selenicereus undatus HOM05D006981 ORTHO05D008719 3.9e-48 194.9 129 78.3
Sc19g0001580 Simmondsia chinensis HOM05D006981 ORTHO05D008719 5.9e-44 181.0 126 69.0
vmacro06697 Vaccinium macrocarpon HOM05D006981 ORTHO05D008719 1.3e-43 179.9 120 75.0
Haze_13729 Corylus avellana HOM05D006981 ORTHO05D008719 1.9e-42 176.0 121 71.1
CAN.G28.6 Capsicum annuum HOM05D006981 ORTHO05D008719 1.2e-41 173.3 120 68.3
MSTRG.27124 Avicennia marina HOM05D006981 ORTHO05D008719 2.7e-41 172.2 120 70.0
CiPaw.03G105000 Carya illinoinensis HOM05D006981 ORTHO05D008719 2.7e-41 172.2 120 69.2
Manes.09G002400 Manihot esculenta HOM05D006981 ORTHO05D008719 2.7e-41 172.2 122 71.3
Thecc.03G174800 Theobroma cacao HOM05D006981 ORTHO05D008719 2.7e-41 172.2 125 66.4
TWI14G0356 Tripterygium wilfordii HOM05D006981 ORTHO05D008719 2.7e-41 172.2 119 69.7
Cfa008306 Carpinus fangiana HOM05D006981 ORTHO05D008719 8.0e-41 170.6 121 69.4
PGR142G3060 Punica granatum HOM05D006981 ORTHO05D008719 8.0e-41 170.6 120 69.2
COL.COLO4_14290 Corchorus olitorius HOM05D006981 ORTHO05D008719 1.0e-40 170.2 126 68.3
Eucgr.K00242 Eucalyptus grandis HOM05D006981 ORTHO05D008719 1.0e-40 170.2 120 69.2
Nitab4.5_0000080g0060 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.0e-40 170.2 125 65.6
Duzib084G0697 Durio zibethinus HOM05D006981 ORTHO05D008719 1.4e-40 169.9 121 70.2
Nitab4.5_0019580g0020 Nicotiana tabacum HOM05D006981 ORTHO05D008719 1.4e-40 169.9 121 68.6
PGSC0003DMG400015647 Solanum tuberosum HOM05D006981 ORTHO05D008719 2.3e-40 169.1 120 66.7
Duzib205G0859 Durio zibethinus HOM05D006981 ORTHO05D008719 3.0e-40 168.7 121 69.4
Sopen06g017220 Solanum pennellii HOM05D006981 ORTHO05D008719 3.0e-40 168.7 124 63.7
Solyc06g051300.3 Solanum lycopersicum HOM05D006981 ORTHO05D008719 3.9e-40 168.3 125 64.0
Gohir.D08G111300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 5.2e-40 167.9 120 69.2
Gorai.004G119200 Gossypium raimondii HOM05D006981 ORTHO05D008719 5.2e-40 167.9 120 69.2
Hma1.2p1_0270F.1_g108180 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 6.7e-40 167.5 120 66.7
GSVIVG01010548001 Vitis vinifera HOM05D006981 ORTHO05D008719 6.7e-40 167.5 125 65.6
ClCG01G005500 Citrullus lanatus HOM05D003170 ORTHO05D008719 2.0e-39 166.0 124 64.5
Manes.06G146000 Manihot esculenta HOM05D006981 ORTHO05D008719 2.0e-39 166.0 121 67.8
QL09p014567 Quercus lobata HOM05D006981 ORTHO05D008719 2.0e-39 166.0 120 65.0
Gohir.A08G100300 Gossypium hirsutum HOM05D006981 ORTHO05D008719 2.6e-39 165.6 120 67.5
SGA_v2.0_scaffold2G01066 Striga asiatica HOM05D006981 ORTHO05D008719 3.3e-39 165.2 121 64.5
Migut.F00354 Erythranthe guttata HOM05D006981 ORTHO05D008719 5.7e-39 164.5 128 63.3
ECA233G5478 Erigeron canadensis HOM05D006981 ORTHO05D008719 9.7e-39 163.7 130 64.6
CsaV3_5G005720 Cucumis sativus L. HOM05D006981 ORTHO05D008719 2.2e-38 162.5 125 64.0
Oeu056238.2 Olea europaea HOM05D006981 ORTHO05D008719 2.2e-38 162.5 121 66.9
TAR375G0811 Trochodendron aralioides HOM05D006981 ORTHO05D008719 4.8e-38 161.4 121 67.8
MELO3C005381.2 Cucumis melo HOM05D006981 ORTHO05D008719 6.3e-38 161.0 125 62.4
Glyma.16G194500 Glycine max HOM05D006981 ORTHO05D008719 6.3e-38 161.0 120 64.2
Medtr6g471020 Medicago truncatula HOM05D006981 ORTHO05D008719 6.3e-38 161.0 120 67.5
Glyma.09G140600 Glycine max HOM05D006981 ORTHO05D008719 8.2e-38 160.6 120 64.2
Nn4g26525 Nelumbo nucifera HOM05D006981 ORTHO05D008719 8.2e-38 160.6 120 65.0
HanXRQChr08g0209251 Helianthus annuus HOM05D006981 ORTHO05D008719 1.1e-37 160.2 121 67.8
VMungo0464G1391 Vigna mungo HOM05D006981 ORTHO05D008719 1.1e-37 160.2 121 63.6
Cpa.g.sc107.36 Carica papaya HOM05D006981 ORTHO05D008719 1.4e-37 159.8 120 65.8
Ciclev10006231m.g Citrus clementina HOM05D006981 ORTHO05D008719 1.4e-37 159.8 120 65.8
Lsat_1_v5_gn_8_8340 Lactuca sativa HOM05D006981 ORTHO05D008719 1.4e-37 159.8 123 66.7
Aqoxy7G00390 Aquilegia oxysepala HOM05D006981 ORTHO05D008719 1.8e-37 159.5 121 63.6
Atru.chr1.479 Acer truncatum HOM05D006981 ORTHO05D008719 2.4e-37 159.1 121 63.6
DCAR_009354 Daucus carota HOM05D006981 ORTHO05D008719 3.1e-37 158.7 122 60.7
Lj1C995G12 Lonicera japonica HOM05D006981 ORTHO05D008719 4.1e-37 158.3 120 64.2
Sed0011448 Sechium edule HOM05D006981 ORTHO05D008719 5.3e-37 157.9 120 62.5
Actinidia32871 Actinidia chinensis HOM05D006981 ORTHO05D008719 7.0e-37 157.5 148 56.1
Cc02_g03150 Coffea canephora HOM05D006981 ORTHO05D008719 7.0e-37 157.5 130 61.5
FvH4_7g29270 Fragaria vesca HOM05D006981 ORTHO05D008719 7.0e-37 157.5 123 64.2
FAN10G3446 Fragaria x ananassa HOM05D006981 ORTHO05D008719 7.0e-37 157.5 123 64.2
MD07G1267100 Malus domestica HOM05D006981 ORTHO05D008719 9.1e-37 157.1 120 65.0
FAN03G1713 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.2e-36 156.8 123 64.2
MBI17_g21049_MAGBIO Magnolia biondii HOM05D006981 ORTHO05D008719 1.2e-36 156.8 120 64.2
Lj2g0020265 Lotus japonicus HOM05D006981 ORTHO05D008719 1.6e-36 156.4 120 63.3
RcHm_v2.0_Chr1g0377021 Rosa chinensis HOM05D006981 ORTHO05D008719 2.6e-36 155.6 121 63.6
arahy.Tifrunner.gnm1.ann1.8WRD93 Arachis hypogaea HOM05D006981 ORTHO05D008719 3.5e-36 155.2 125 63.2
arahy.Tifrunner.gnm1.ann1.T9EWQW Arachis hypogaea HOM05D006981 ORTHO05D008719 3.5e-36 155.2 124 62.9
FAN03G1998 Fragaria x ananassa HOM05D006981 ORTHO05D008719 3.5e-36 155.2 123 63.4
unitig_747.g21767 Utricularia gibba HOM05D006981 ORTHO05D008719 3.5e-36 155.2 120 59.2
FAN01G2034 Fragaria x ananassa HOM05D006981 ORTHO05D008719 4.5e-36 154.8 124 62.1
Sabra15G0150900 Salix brachista HOM05D006981 ORTHO05D008719 4.5e-36 154.8 125 64.0
Potri.015G140200 Populus trichocarpa HOM05D006981 ORTHO05D008719 5.9e-36 154.5 130 63.1
Ca_25351_v3 Cicer arietinum L. HOM05D000367 ORTHO05D001438 1.0e-35 153.7 120 64.2
SalBow4G1422 Salvia bowleyana HOM05D006981 ORTHO05D008719 1.0e-35 153.7 124 62.1
Phvul.004G118000 Phaseolus vulgaris HOM05D006981 ORTHO05D008719 1.3e-35 153.3 120 61.7
THA.LOC104825097 Tarenaya hassleriana HOM05D006981 ORTHO05D008719 1.3e-35 153.3 125 64.8
CDE08G1025 Ceratophyllum demersum HOM05D006981 ORTHO05D008719 1.7e-35 152.9 122 59.0
SalBow4G2131 Salvia bowleyana HOM05D006981 ORTHO05D008719 2.9e-35 152.1 124 61.3
AL8G26600 Arabidopsis lyrata HOM05D006981 ORTHO05D008719 5.0e-35 151.4 123 62.6
AT5G52220 Arabidopsis thaliana HOM05D006981 ORTHO05D008719 5.0e-35 151.4 123 62.6
PSO782G4575 Papaver somniferum HOM05D006981 ORTHO05D008719 5.0e-35 151.4 126 57.9
BcaB08g35575 Brassica carinata HOM05D006981 ORTHO05D008719 6.5e-35 151.0 123 61.8
Sp6g14470 Schrenkiella parvula HOM05D006981 ORTHO05D008719 8.5e-35 150.6 122 63.1
Lalb_Chr19g0130931 Lupinus albus HOM05D006981 ORTHO05D008719 1.1e-34 150.2 122 60.7
FAN06G1994 Fragaria x ananassa HOM05D006981 ORTHO05D008719 1.5e-34 149.8 123 62.6
Aa31LG3G8600 Aethionema arabicum HOM05D006981 ORTHO05D008719 1.9e-34 149.4 124 62.1
BcaC04g20601 Brassica carinata HOM05D006981 ORTHO05D008719 1.9e-34 149.4 126 61.9
BolC9t57050H Brassica oleracea HOM05D006981 ORTHO05D008719 1.9e-34 149.4 126 61.9
Carub.0008s1231 Capsella rubella HOM05D006981 ORTHO05D008719 1.9e-34 149.4 121 62.8
Thhalv10015042m.g Eutrema salsugineum HOM05D006981 ORTHO05D008719 1.9e-34 149.4 123 61.8
A10p09920 Brassica napus HOM05D006981 ORTHO05D008719 3.2e-34 148.7 126 60.3
CSS0044451 Camellia sinensis var. sinensis HOM05D006981 ORTHO05D008719 3.2e-34 148.7 121 62.8
CANSAT21G0349 Cannabis sativa HOM05D006981 ORTHO05D008719 3.2e-34 148.7 120 60.0
BraA10t43072Z Brassica rapa HOM05D006981 ORTHO05D008719 5.5e-34 147.9 126 59.5
C09p41630 Brassica napus HOM05D006981 ORTHO05D008719 7.2e-34 147.5 126 61.1
PSO478G2189 Papaver somniferum HOM05D006981 ORTHO05D008719 3.6e-33 145.2 127 55.9
HPP92_028124 Vanilla planifolia HOM05D006981 ORTHO05D008719 8.0e-33 144.1 120 60.8
CARHR265140 Cardamine hirsuta HOM05D006981 ORTHO05D008719 1.0e-32 143.7 123 60.2
FAN06G2660 Fragaria x ananassa HOM05D006981 ORTHO05D008719 2.3e-32 142.5 123 61.0
HPP92_020865 Vanilla planifolia HOM05D006981 ORTHO05D008719 2.3e-32 142.5 120 60.0
Prupe.2G292700 Prunus persica HOM05D006981 ORTHO05D008719 8.8e-32 140.6 123 57.7
SHI13798 Sapria himalayana HOM05D006981 ORTHO05D008719 1.7e-30 136.3 149 49.7
Zm00001eb309380 Zea mays HOM05D006981 ORTHO05D008719 2.0e-28 129.4 127 51.2
Manes.14G129556 Manihot esculenta HOM05D006981 ORTHO05D008719 3.5e-28 128.6 84 73.8
Pp3c14_5260 Physcomitrium patens HOM05D006981 ORTHO05D008719 2.5e-26 122.5 124 54.8
Peaxi162Scf00040g00323 Petunia axillaris HOM05D006981 ORTHO05D008719 3.2e-26 122.1 120 53.3
SMO141G0174 Selaginella moellendorffii HOM05D006981 ORTHO05D008719 4.2e-26 121.7 122 55.7
AagrBONN_evm.TU.Sc2ySwM_369.83 Anthoceros agrestis HOM05D006981 ORTHO05D008719 5.7e-23 111.3 123 50.4
Mapoly0027s0013 Marchantia polymorpha HOM05D006981 ORTHO05D008719 4.8e-22 108.2 126 49.2
Actinidia34099 Actinidia chinensis HOM05D006981 ORTHO05D008719 1.8e-21 106.3 69 71.0
Psat1g030600 Pisum sativum HOM05D006981 ORTHO05D008719 4.2e-18 95.1 72 72.2
PRCOL_00004746 Prasinoderma coloniale HOM05D006981 ORTHO05D008719 1.6e-17 93.2 127 41.7
Hma1.2p1_0270F.1_g108170 Hydrangea macrophylla HOM05D006981 ORTHO05D008719 3.4e-15 85.5 55 67.3
SEGI_30853 Sequoiadendron giganteum HOM05D006981 ORTHO05D008719 9.2e-13 77.4 76 57.9
Psat1g030360 Pisum sativum HOM05D006981 ORTHO05D008719 3.5e-12 75.5 50 64.0
Cre06.g281750 Chlamydomonas reinhardtii HOM05D006981 ORTHO05D008719 2.9e-11 72.4 123 38.2
CBR_g4805 Chara braunii HOM05D006981 ORTHO05D008719 1.5e-10 70.1 108 38.9


User provided reference genes

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