Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g068490 Amaranthus hybridus HOM05D000034 ORTHO05D000037 2.8e-38 161.4 78 100.0
AUR62004197 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.2e-18 94.4 71 63.4
AUR62037638 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.1e-17 92.0 69 62.3
Ah.03g144060 Amaranthus hybridus HOM05D000034 ORTHO05D000037 3.6e-17 91.3 74 59.5
AUR62019986 Chenopodium quinoa HOM05D000034 ORTHO05D000037 4.7e-17 90.9 74 59.5
AUR62024405 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.1e-17 90.5 74 59.5
AUR62008288 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-16 88.2 74 59.5
AUR62014908 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-16 88.2 74 59.5
AUR62021534 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-16 88.2 74 59.5
AUR62030449 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-16 88.2 74 59.5
AUR62035348 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.0e-16 88.2 69 62.3
AUR62016298 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.2e-16 87.4 74 58.1
AUR62028530 Chenopodium quinoa HOM05D000034 ORTHO05D000037 6.8e-16 87.0 74 58.1
AUR62007332 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-15 86.3 69 60.9
AUR62035350 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.2e-15 86.3 69 60.9
AUR62031342 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.5e-15 85.9 69 60.9
AUR62040264 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-15 85.5 74 56.8
AUR62032998 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.6e-15 85.1 71 57.7
EL10Ac9g21045 Beta vulgaris HOM05D000034 ORTHO05D000037 9.8e-15 83.2 71 57.7
EL10As18g24168 Beta vulgaris HOM05D000034 ORTHO05D000037 1.3e-14 82.8 73 60.3
AUR62030490 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.7e-14 82.4 74 56.8
EL10Ac9g22347 Beta vulgaris HOM05D000034 ORTHO05D000037 3.7e-14 81.3 74 54.1
EL10Ac2g03584 Beta vulgaris HOM05D000034 ORTHO05D000037 4.9e-14 80.9 69 53.6
EL10Ac3g06861 Beta vulgaris HOM05D000034 ORTHO05D000037 4.9e-14 80.9 69 53.6
AUR62029549 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.8e-13 79.0 64 60.9
AUR62030228 Chenopodium quinoa HOM05D000034 ORTHO05D000037 3.2e-13 78.2 65 60.0
AUR62014937 Chenopodium quinoa HOM05D000034 ORTHO05D000037 5.4e-13 77.4 65 58.5
AUR62002125 Chenopodium quinoa HOM05D000034 ORTHO05D000037 7.0e-13 77.0 65 58.5
EL10Ac1g00821 Beta vulgaris HOM05D000034 ORTHO05D000037 3.5e-12 74.7 65 61.5
EL10Ac4g09071 Beta vulgaris HOM05D000034 ORTHO05D000037 1.3e-11 72.8 60 58.3
AUR62033845 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.7e-11 72.4 57 61.4
EL10Ac3g06147 Beta vulgaris HOM05D000034 ORTHO05D000037 1.1e-10 69.7 63 55.6
EL10Ac7g17645 Beta vulgaris HOM05D000034 ORTHO05D000037 3.3e-10 68.2 63 55.6
AUR62006275 Chenopodium quinoa HOM05D000034 ORTHO05D000277 6.2e-09 63.9 61 54.1
EL10Ac2g03169 Beta vulgaris HOM05D000034 ORTHO05D000037 3.1e-08 61.6 69 47.8
EL10Ac8g19887 Beta vulgaris HOM05D000034 ORTHO05D000037 8.9e-08 60.1 63 52.4
AUR62030444 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-07 58.9 56 53.6
Hma1.2p1_0127F.1_g059736 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.0e-07 58.9 63 47.6
EL10Ac5g12424 Beta vulgaris HOM05D000034 ORTHO05D000277 2.6e-07 58.5 78 42.3
Atru.chr1.1710 Acer truncatum HOM05D000034 ORTHO05D000037 3.4e-07 58.2 65 47.7
CSS0019923 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.2 62 46.8
CSS0030047 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.2 68 42.6
CSS0036504 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.2 62 46.8
CSS0036649 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.2 62 46.8
CSS0044841 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.2 62 46.8
CSS0047009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.4e-07 58.2 62 46.8
Atru.chr8.121 Acer truncatum HOM05D000034 ORTHO05D000037 7.5e-07 57.0 67 46.3
Atru.chr8.1322 Acer truncatum HOM05D000034 ORTHO05D000037 7.5e-07 57.0 67 46.3
Hma1.2p1_0035F.1_g021910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.5e-07 57.0 63 47.6
Hma1.2p1_0354F.1_g133450 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.5e-07 57.0 63 47.6
CSS0028844 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.3e-06 56.2 62 45.2
Hma1.2p1_0698F.1_g205360 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 56.2 69 44.9
CSS0041743 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-06 55.8 65 44.6
AUR62031611 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.7e-06 55.8 48 58.3
Hma1.2p1_0896F.1_g233910 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.7e-06 55.8 62 48.4
Hma1.2p1_0340F.1_g130190 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.9e-06 55.1 67 43.3
CSS0004393 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 3.7e-06 54.7 66 42.4
Hma1.2p1_0026F.1_g016610 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-06 54.7 64 48.4
Hma1.2p1_0535F.1_g173780 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-06 54.7 67 43.3
Hma1.2p1_2245F.1_g317960 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.7e-06 54.7 63 46.0
MD05G1202800 Malus domestica HOM05D000034 ORTHO05D000037 3.7e-06 54.7 68 38.2
EL10Ac5g11589 Beta vulgaris HOM05D000034 ORTHO05D000037 6.4e-06 53.9 66 47.0
ECA247G1477 Erigeron canadensis HOM05D000034 ORTHO05D000037 6.4e-06 53.9 69 39.1
MD02G1090600 Malus domestica HOM05D000034 ORTHO05D000037 8.3e-06 53.5 63 41.3
MD02G1173300 Malus domestica HOM05D000034 ORTHO05D000037 8.3e-06 53.5 63 41.3


User provided reference genes

Program Settings