Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g067900 Amaranthus hybridus HOM05D007050 ORTHO05D008849 6.2e-100 367.5 185 100.0
AUR62016042 Chenopodium quinoa HOM05D007050 ORTHO05D008849 2.4e-51 206.1 137 75.9
AUR62021248 Chenopodium quinoa HOM05D007050 ORTHO05D008849 1.5e-50 203.4 187 59.4
EL10Ac3g05723 Beta vulgaris HOM05D007050 ORTHO05D008849 5.9e-50 201.4 128 81.2
EL10Ac3g05676 Beta vulgaris HOM05D007050 ORTHO05D008849 1.6e-47 193.4 127 78.7
Hund18113 Selenicereus undatus HOM05D007050 ORTHO05D008849 7.4e-45 184.5 137 68.6
Sc19g0001730 Simmondsia chinensis HOM05D007050 ORTHO05D008849 2.9e-41 172.6 137 66.4
Sed0026780 Sechium edule HOM05D007050 ORTHO05D008849 1.2e-39 167.2 138 62.3
CANSAT25G0493 Cannabis sativa HOM05D007050 ORTHO05D008849 1.6e-39 166.8 138 65.2
ClCG01G005370 Citrullus lanatus HOM05D007050 ORTHO05D008849 3.6e-39 165.6 138 64.5
CsaV3_5G005620 Cucumis sativus L. HOM05D007050 ORTHO05D008849 3.6e-39 165.6 138 63.0
Dinv01994 Davidia involucrata HOM05D007050 ORTHO05D008849 3.9e-38 162.2 137 61.3
MD05G1079400 Malus domestica HOM05D007050 ORTHO05D008849 3.9e-38 162.2 138 62.3
Dinv21998 Davidia involucrata HOM05D007050 ORTHO05D008849 6.7e-38 161.4 137 61.3
Dinv30101 Davidia involucrata HOM05D007050 ORTHO05D008849 6.7e-38 161.4 137 61.3
Manes.06G142700 Manihot esculenta HOM05D007050 ORTHO05D008849 1.5e-37 160.2 127 63.8
MELO3C005391.2 Cucumis melo HOM05D007050 ORTHO05D008849 2.0e-37 159.8 128 65.6
Ciclev10006100m.g Citrus clementina HOM05D007050 ORTHO05D008849 2.6e-37 159.5 138 62.3
COL.COLO4_14249 Corchorus olitorius HOM05D007050 ORTHO05D008849 2.6e-37 159.5 133 61.7
Thhalv10003284m.g Eutrema salsugineum HOM05D007050 ORTHO05D008849 2.6e-37 159.5 110 70.9
GSVIVG01010640001 Vitis vinifera HOM05D007050 ORTHO05D008849 2.6e-37 159.5 137 57.7
DCAR_020794 Daucus carota HOM05D007050 ORTHO05D008849 3.3e-37 159.1 137 57.7
Duzib084G1442 Durio zibethinus HOM05D007050 ORTHO05D008849 3.3e-37 159.1 133 61.7
Potri.012G134700 Populus trichocarpa HOM05D007050 ORTHO05D008849 4.4e-37 158.7 137 60.6
Sed0027301 Sechium edule HOM05D007050 ORTHO05D008849 5.7e-37 158.3 151 57.6
RcHm_v2.0_Chr6g0256951 Rosa chinensis HOM05D007050 ORTHO05D008849 9.7e-37 157.5 137 59.1
Aqoxy7G00473 Aquilegia oxysepala HOM05D007050 ORTHO05D008849 1.3e-36 157.1 137 57.7
FAN15G0493 Fragaria x ananassa HOM05D007050 ORTHO05D008849 1.7e-36 156.8 140 62.1
PGR031G0901 Punica granatum HOM05D007050 ORTHO05D008849 2.2e-36 156.4 139 58.3
Sp2g07800 Schrenkiella parvula HOM05D007050 ORTHO05D008849 2.2e-36 156.4 114 68.4
BcaB07g31026 Brassica carinata HOM05D007050 ORTHO05D008849 2.8e-36 156.0 123 67.5
CiPaw.04G068600 Carya illinoinensis HOM05D007050 ORTHO05D008849 2.8e-36 156.0 141 58.2
Prupe.8G123300 Prunus persica HOM05D007050 ORTHO05D008849 2.8e-36 156.0 137 58.4
MBI04_g03341_MAGBIO Magnolia biondii HOM05D007050 ORTHO05D008849 3.7e-36 155.6 137 61.3
Aa31LG9G13150 Aethionema arabicum HOM05D007050 ORTHO05D008849 4.8e-36 155.2 131 64.1
TWI14G0742 Tripterygium wilfordii HOM05D007050 ORTHO05D008849 6.3e-36 154.8 137 60.6
Lj1P158T25 Lonicera japonica HOM05D007050 ORTHO05D008849 8.2e-36 154.5 137 57.7
Atru.chr1.541 Acer truncatum HOM05D007050 ORTHO05D008849 1.1e-35 154.1 128 63.3
CSS0007014 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.1e-35 154.1 137 59.9
CSS0039992 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.1e-35 154.1 137 59.9
THA.LOC104820496 Tarenaya hassleriana HOM05D007050 ORTHO05D008849 1.4e-35 153.7 101 73.3
BcaC04g21951 Brassica carinata HOM05D007050 ORTHO05D008849 1.8e-35 153.3 114 71.9
Cc02_g03480 Coffea canephora HOM05D007050 ORTHO05D008849 1.8e-35 153.3 132 65.2
FvH4_2g06230 Fragaria vesca HOM05D007050 ORTHO05D008849 1.8e-35 153.3 140 60.7
BraA09t37628Z Brassica rapa HOM05D007050 ORTHO05D008849 2.4e-35 152.9 114 71.1
Ca_14876_v3 Cicer arietinum L. HOM05D007050 ORTHO05D008849 2.4e-35 152.9 128 65.6
Lalb_Chr18g0050481 Lupinus albus HOM05D007050 ORTHO05D008849 2.4e-35 152.9 100 79.0
arahy.Tifrunner.gnm1.ann1.78X7SL Arachis hypogaea HOM05D007050 ORTHO05D008849 3.1e-35 152.5 121 68.6
arahy.Tifrunner.gnm1.ann1.PW8R36 Arachis hypogaea HOM05D007050 ORTHO05D008849 3.1e-35 152.5 121 68.6
Gohir.A12G261300 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.1e-35 152.5 125 64.8
PSO832G4279 Papaver somniferum HOM05D007050 ORTHO05D008849 3.1e-35 152.5 99 76.8
Actinidia32907 Actinidia chinensis HOM05D007050 ORTHO05D008849 4.1e-35 152.1 130 62.3
A09p20160 Brassica napus HOM05D007050 ORTHO05D008849 4.1e-35 152.1 138 60.1
CiPaw.03G101700 Carya illinoinensis HOM05D007050 ORTHO05D008849 4.1e-35 152.1 131 62.6
Haze_13774 Corylus avellana HOM05D007050 ORTHO05D008849 5.3e-35 151.8 138 58.0
Gorai.008G281000 Gossypium raimondii HOM05D007050 ORTHO05D008849 5.3e-35 151.8 125 64.8
Sabra12G0101300 Salix brachista HOM05D007050 ORTHO05D008849 5.3e-35 151.8 137 58.4
TAR375G0109 Trochodendron aralioides HOM05D007050 ORTHO05D008849 5.3e-35 151.8 137 58.4
ECA248G3280 Erigeron canadensis HOM05D007050 ORTHO05D008849 6.9e-35 151.4 139 61.2
TPR.G14735 Trifolium pratense HOM05D007050 ORTHO05D008849 6.9e-35 151.4 125 64.0
vmacro09864 Vaccinium macrocarpon HOM05D007050 ORTHO05D008849 6.9e-35 151.4 137 59.1
Migut.F01153 Erythranthe guttata HOM05D007050 ORTHO05D008849 9.1e-35 151.0 100 73.0
Glyma.18G070900 Glycine max HOM05D007050 ORTHO05D008849 9.1e-35 151.0 131 62.6
Medtr3g061530 Medicago truncatula HOM05D007050 ORTHO05D008849 9.1e-35 151.0 128 64.8
AT5G43050 Arabidopsis thaliana HOM05D007050 ORTHO05D008849 1.5e-34 150.2 140 59.3
CSS0050457 Camellia sinensis var. sinensis HOM05D007050 ORTHO05D008849 1.5e-34 150.2 137 58.4
CAN.G411.83 Capsicum annuum HOM05D007050 ORTHO05D008849 1.5e-34 150.2 145 55.9
Cfa008270 Carpinus fangiana HOM05D007050 ORTHO05D008849 1.5e-34 150.2 127 60.6
ATR0712G080 Amborella trichopoda HOM05D007050 ORTHO05D008849 2.0e-34 149.8 120 65.0
Lsat_1_v5_gn_1_51040 Lactuca sativa HOM05D007050 ORTHO05D008849 2.0e-34 149.8 138 60.1
C09p25560 Brassica napus HOM05D007050 ORTHO05D008849 2.6e-34 149.4 99 75.8
BolC9t55456H Brassica oleracea HOM05D007050 ORTHO05D008849 2.6e-34 149.4 99 75.8
Lj6g0001476 Lotus japonicus HOM05D007050 ORTHO05D008849 2.6e-34 149.4 125 65.6
Phvul.006G062300 Phaseolus vulgaris HOM05D007050 ORTHO05D008849 3.4e-34 149.1 131 61.1
CARHR186790 Cardamine hirsuta HOM05D007050 ORTHO05D008849 4.5e-34 148.7 112 67.9
unitig_0.g465 Utricularia gibba HOM05D007050 ORTHO05D008849 4.5e-34 148.7 113 65.5
AL8G17700 Arabidopsis lyrata HOM05D007050 ORTHO05D008849 5.9e-34 148.3 116 67.2
Carub.0008s0571 Capsella rubella HOM05D007050 ORTHO05D008849 5.9e-34 148.3 140 60.0
Os04g0488600 Oryza sativa ssp. japonica HOM05D007050 ORTHO05D008849 7.7e-34 147.9 137 62.0
Rhsim09G0195800 Rhododendron simsii HOM05D007050 ORTHO05D008849 7.7e-34 147.9 137 58.4
Thecc.03G169300 Theobroma cacao HOM05D007050 ORTHO05D008849 7.7e-34 147.9 137 59.1
Hma1.2p1_0270F.1_g108570 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 1.0e-33 147.5 112 66.1
PGSC0003DMG400028475 Solanum tuberosum HOM05D007050 ORTHO05D008849 1.0e-33 147.5 147 54.4
Peaxi162Scf00302g00002 Petunia axillaris HOM05D007050 ORTHO05D008849 1.3e-33 147.1 108 70.4
VMungo0540G0839 Vigna mungo HOM05D007050 ORTHO05D008849 1.7e-33 146.7 96 75.0
Psat5g164520 Pisum sativum HOM05D007050 ORTHO05D008849 2.2e-33 146.4 96 74.0
Nitab4.5_0002395g0040 Nicotiana tabacum HOM05D007050 ORTHO05D008849 2.9e-33 146.0 109 70.6
Sopen02g021430 Solanum pennellii HOM05D007050 ORTHO05D008849 2.9e-33 146.0 138 58.0
SGA_v2.0_scaffold10G05396 Striga asiatica HOM05D007050 ORTHO05D008849 2.9e-33 146.0 137 56.2
Gohir.D12G262200 Gossypium hirsutum HOM05D007050 ORTHO05D008849 3.8e-33 145.6 116 65.5
Nitab4.5_0005171g0060 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.8e-33 145.6 102 73.5
Nitab4.5_0007465g0080 Nicotiana tabacum HOM05D007050 ORTHO05D008849 3.8e-33 145.6 102 73.5
Atru.BG.173.p Acer truncatum HOM05D007050 ORTHO05D008849 6.5e-33 144.8 93 77.4
CDE03G0478 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 1.4e-32 143.7 96 72.9
Nitab4.5_0002684g0010 Nicotiana tabacum HOM05D007050 ORTHO05D008849 1.4e-32 143.7 104 69.2
HanXRQChr11g0350791 Helianthus annuus HOM05D007050 ORTHO05D008849 2.5e-32 142.9 101 71.3
Nn6g34283 Nelumbo nucifera HOM05D007050 ORTHO05D008849 7.2e-32 141.4 127 58.3
Zm00001eb078970 Zea mays HOM05D007050 ORTHO05D008849 7.2e-32 141.4 136 58.1
SEGI_25801 Sequoiadendron giganteum HOM05D007050 ORTHO05D008849 2.7e-31 139.4 96 68.8
Nitab4.5_0007465g0070 Nicotiana tabacum HOM05D007050 ORTHO05D008849 4.7e-31 138.7 134 59.0
Lj2P125T52 Lonicera japonica HOM05D007050 ORTHO05D008849 7.9e-31 137.9 96 68.8
CDE04G2008 Ceratophyllum demersum HOM05D007050 ORTHO05D008849 6.7e-30 134.8 86 75.6
Mapoly0142s0029 Marchantia polymorpha HOM05D007050 ORTHO05D008849 2.4e-27 126.3 97 64.9
Pp3c18_12660 Physcomitrium patens HOM05D007050 ORTHO05D008849 2.1e-23 113.2 101 60.4
AagrBONN_evm.TU.Sc2ySwM_344.2682 Anthoceros agrestis HOM05D007050 ORTHO05D008849 2.3e-22 109.8 127 50.4
Eucgr.A02837 Eucalyptus grandis HOM05D007050 ORTHO05D008849 8.8e-22 107.8 137 46.7
SMO352G0024 Selaginella moellendorffii HOM05D007050 ORTHO05D008849 1.5e-21 107.1 86 58.1
Hma1.2p1_0270F.1_g108560 Hydrangea macrophylla HOM05D007050 ORTHO05D008849 9.4e-16 87.8 122 41.8
AagrBONN_evm.TU.Sc2ySwM_362.597 Anthoceros agrestis HOM05D007050 ORTHO05D008849 1.8e-11 73.6 86 46.5
MCO11G758 Micromonas commoda HOM05D007050 ORTHO05D008849 3.6e-07 59.3 81 40.7


User provided reference genes

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