Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g067760 Amaranthus hybridus HOM05D000003 ORTHO05D000004 4.9e-76 287.7 145 100.0
Ah.03g142580 Amaranthus hybridus HOM05D000003 ORTHO05D000004 1.3e-23 113.6 116 47.4
SHI49151 Sapria himalayana HOM05D000003 ORTHO05D000004 1.4e-09 67.0 89 39.3
CANSAT25G0319 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-09 66.2 95 30.5
SHI14472 Sapria himalayana HOM05D000003 ORTHO05D000004 8.8e-09 64.3 89 39.3
SHI13433 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-08 63.5 89 37.1
SHI46115 Sapria himalayana HOM05D000003 ORTHO05D000004 1.5e-08 63.5 90 36.7
SHI07294 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-08 62.8 90 35.6
SHI14738 Sapria himalayana HOM05D000003 ORTHO05D000004 2.5e-08 62.8 89 37.1
SHI13332 Sapria himalayana HOM05D000003 ORTHO05D000004 3.3e-08 62.4 116 37.1
SHI33828 Sapria himalayana HOM05D000003 ORTHO05D000004 3.3e-08 62.4 90 36.7
SHI34677 Sapria himalayana HOM05D000003 ORTHO05D000004 3.3e-08 62.4 90 36.7
SHI48186 Sapria himalayana HOM05D000003 ORTHO05D000004 3.3e-08 62.4 90 36.7
SHI05532 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-08 62.0 90 35.6
SHI20940 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-08 62.0 90 36.7
SHI46889 Sapria himalayana HOM05D000003 ORTHO05D000004 4.3e-08 62.0 90 35.6
CANSAT21G2436 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-08 61.2 95 31.6
AUR62015316 Chenopodium quinoa HOM05D000003 ORTHO05D000004 9.7e-08 60.8 99 33.3
CANSAT80G1175 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.5 95 34.7
SHI51855 Sapria himalayana HOM05D000003 ORTHO05D000004 1.3e-07 60.5 89 37.1
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 1.3e-07 60.5 110 31.8
SHI35533 Sapria himalayana HOM05D000003 ORTHO05D000004 2.2e-07 59.7 90 32.2
Sopen00g007850 Solanum pennellii HOM05D000003 ORTHO05D000004 2.2e-07 59.7 110 32.7
Sopen00g006710 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-07 59.3 107 34.6
Sopen00g013580 Solanum pennellii HOM05D000003 ORTHO05D000004 2.8e-07 59.3 107 34.6
EL10Ac1g02038 Beta vulgaris HOM05D000003 ORTHO05D000006 3.7e-07 58.9 89 29.2
Sopen00g012810 Solanum pennellii HOM05D000003 ORTHO05D000004 4.8e-07 58.5 110 29.1
Sopen00g006450 Solanum pennellii HOM05D000003 ORTHO05D000004 8.2e-07 57.8 110 32.7
Sopen07g018030 Solanum pennellii HOM05D000003 ORTHO05D000004 8.2e-07 57.8 110 32.7
SHI14051 Sapria himalayana HOM05D000003 ORTHO05D000004 1.1e-06 57.4 89 34.8
Sopen05g024150 Solanum pennellii HOM05D000003 ORTHO05D000004 1.1e-06 57.4 110 31.8
Sopen12g026830 Solanum pennellii HOM05D000003 ORTHO05D000007 1.1e-06 57.4 97 34.0
Sopen00g008230 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-06 57.0 97 33.0
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-06 57.0 110 30.0
Sopen12g013620 Solanum pennellii HOM05D000003 ORTHO05D000004 1.4e-06 57.0 110 31.8
Sopen00g004600 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-06 56.6 102 32.4
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-06 56.6 110 32.7
Sopen00g009000 Solanum pennellii HOM05D000003 ORTHO05D000004 1.8e-06 56.6 105 31.4
AUR62025789 Chenopodium quinoa HOM05D000003 ORTHO05D000004 3.1e-06 55.8 137 33.6
AUR62037365 Chenopodium quinoa HOM05D000003 ORTHO05D044012 3.1e-06 55.8 94 33.0
Sopen00g005620 Solanum pennellii HOM05D000003 ORTHO05D000004 3.1e-06 55.8 110 31.8
Sopen00g010250 Solanum pennellii HOM05D000003 ORTHO05D000004 4.1e-06 55.5 100 30.0
CANSAT35G0636 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 55.1 91 29.7
CAN.G1315.6 Capsicum annuum HOM05D000003 ORTHO05D000004 5.3e-06 55.1 95 32.6
Nitab4.5_0002863g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000006 5.3e-06 55.1 93 30.1
Hund08324 Selenicereus undatus HOM05D000003 ORTHO05D000004 5.3e-06 55.1 83 33.7
Sopen01g024500 Solanum pennellii HOM05D000003 ORTHO05D000004 5.3e-06 55.1 101 31.7
Sopen04g018170 Solanum pennellii HOM05D000003 ORTHO05D000004 5.3e-06 55.1 102 33.3
CANSAT01G2946 Cannabis sativa HOM05D000003 ORTHO05D000004 6.9e-06 54.7 101 23.8
Nitab4.5_0000106g0320 Nicotiana tabacum HOM05D000003 ORTHO05D000006 6.9e-06 54.7 103 30.1
Sopen00g009820 Solanum pennellii HOM05D000003 ORTHO05D000004 6.9e-06 54.7 107 29.0
Sopen02g001330 Solanum pennellii HOM05D000003 ORTHO05D000004 6.9e-06 54.7 110 32.7
SHI29856 Sapria himalayana HOM05D000003 ORTHO05D000004 9.1e-06 54.3 138 29.7
Sopen00g005320 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-06 54.3 102 31.4
Sopen00g008520 Solanum pennellii HOM05D000003 ORTHO05D000004 9.1e-06 54.3 142 28.2


User provided reference genes

Program Settings