Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g067570 Amaranthus hybridus HOM05D006795 ORTHO05D008573 6.0e-108 394.0 180 100.0
AUR62016086 Chenopodium quinoa HOM05D006795 ORTHO05D008573 4.2e-85 318.2 182 78.6
AUR62035033 Chenopodium quinoa HOM05D006795 ORTHO05D008573 3.9e-83 311.6 182 76.9
EL10Ac3g05773 Beta vulgaris HOM05D006795 ORTHO05D008573 1.4e-80 303.1 182 75.8
Hund04657 Selenicereus undatus HOM05D006795 ORTHO05D008573 1.4e-77 293.1 184 73.4
COL.COLO4_14197 Corchorus olitorius HOM05D006795 ORTHO05D008573 7.1e-77 290.8 182 72.5
Lj8A35T83 Lonicera japonica HOM05D006795 ORTHO05D008573 7.1e-77 290.8 182 73.1
Haze_13816 Corylus avellana HOM05D006795 ORTHO05D008573 1.2e-76 290.0 188 71.3
PGR042G2278 Punica granatum HOM05D006795 ORTHO05D008573 4.6e-76 288.1 185 74.1
Cpa.g.sc3.258 Carica papaya HOM05D006795 ORTHO05D008573 1.3e-75 286.6 188 71.8
CiPaw.03G097900 Carya illinoinensis HOM05D006795 ORTHO05D008573 2.3e-75 285.8 188 70.7
Manes.06G139000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.3e-75 285.8 180 70.6
Thecc.03G163300 Theobroma cacao HOM05D006795 ORTHO05D008573 5.1e-75 284.6 182 71.4
CAN.G1187.5 Capsicum annuum HOM05D006795 ORTHO05D008573 8.7e-75 283.9 189 68.8
Manes.06G149000 Manihot esculenta HOM05D006795 ORTHO05D008573 2.5e-74 282.3 180 68.9
TAR636G0045 Trochodendron aralioides HOM05D006795 ORTHO05D008573 7.4e-74 280.8 189 69.3
Sc13g0008130 Simmondsia chinensis HOM05D006795 ORTHO05D008573 9.6e-74 280.4 182 72.0
Potri.015G132300 Populus trichocarpa HOM05D006795 ORTHO05D008573 2.8e-73 278.9 182 68.7
Duzib068G1417 Durio zibethinus HOM05D006795 ORTHO05D008573 3.7e-73 278.5 183 68.9
ECA238G4708 Erigeron canadensis HOM05D006795 ORTHO05D008573 3.7e-73 278.5 189 67.7
Ciclev10005807m.g Citrus clementina HOM05D006795 ORTHO05D008573 4.8e-73 278.1 184 68.5
Nn1g01176 Nelumbo nucifera HOM05D006795 ORTHO05D008573 8.2e-73 277.3 189 69.8
Sabra15G0145100 Salix brachista HOM05D006795 ORTHO05D008573 8.2e-73 277.3 184 70.1
Dinv07998 Davidia involucrata HOM05D006795 ORTHO05D008573 1.1e-72 276.9 189 67.7
THA.LOC104825075 Tarenaya hassleriana HOM05D006795 ORTHO05D008573 1.8e-72 276.2 179 69.8
Medtr1g102470 Medicago truncatula HOM05D006795 ORTHO05D008573 2.4e-72 275.8 187 67.4
Peaxi162Scf00132g00138 Petunia axillaris HOM05D006795 ORTHO05D008573 3.1e-72 275.4 192 67.7
CSS0024840 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 4.1e-72 275.0 189 66.7
Solyc11g072290.3 Solanum lycopersicum HOM05D006795 ORTHO05D008573 4.1e-72 275.0 191 65.4
Sopen11g029960 Solanum pennellii HOM05D006795 ORTHO05D008573 5.3e-72 274.6 191 64.9
Lj5g0021204 Lotus japonicus HOM05D006795 ORTHO05D008573 1.5e-71 273.1 190 65.8
QL12p039358 Quercus lobata HOM05D006795 ORTHO05D008573 2.0e-71 272.7 185 67.6
Oeu021736.1 Olea europaea HOM05D006795 ORTHO05D008573 4.5e-71 271.6 189 66.1
Prupe.2G283700 Prunus persica HOM05D006795 ORTHO05D008573 4.5e-71 271.6 188 69.1
GSVIVG01018489001 Vitis vinifera HOM05D006795 ORTHO05D008573 5.9e-71 271.2 184 67.9
Actinidia03085 Actinidia chinensis HOM05D006795 ORTHO05D008573 1.0e-70 270.4 189 68.3
MSTRG.119 Avicennia marina HOM05D006795 ORTHO05D008573 1.3e-70 270.0 183 69.4
FvH4_7g28300 Fragaria vesca HOM05D006795 ORTHO05D008573 1.7e-70 269.6 185 65.9
arahy.Tifrunner.gnm1.ann1.939HGU Arachis hypogaea HOM05D006795 ORTHO05D008573 2.2e-70 269.2 190 64.2
CANSAT21G1655 Cannabis sativa HOM05D006795 ORTHO05D008573 3.8e-70 268.5 183 66.1
Glyma.10G242200 Glycine max HOM05D006795 ORTHO05D008573 3.8e-70 268.5 188 68.6
vmacro06760 Vaccinium macrocarpon HOM05D006795 ORTHO05D008573 3.8e-70 268.5 189 66.1
FAN06G0634 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.0e-70 268.1 185 66.5
FAN06G3003 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.0e-70 268.1 185 66.5
Nitab4.5_0001589g0020 Nicotiana tabacum HOM05D006795 ORTHO05D008573 5.0e-70 268.1 189 66.7
Actinidia31794 Actinidia chinensis HOM05D006795 ORTHO05D008573 6.5e-70 267.7 189 67.7
Aa31LG3G8130 Aethionema arabicum HOM05D006795 ORTHO05D008573 1.1e-69 266.9 180 67.8
FAN10G2418 Fragaria x ananassa HOM05D006795 ORTHO05D008573 1.1e-69 266.9 185 65.9
arahy.Tifrunner.gnm1.ann1.ATT3CU Arachis hypogaea HOM05D006795 ORTHO05D008573 1.9e-69 266.2 190 63.7
Glyma.20G151900 Glycine max HOM05D006795 ORTHO05D008573 1.9e-69 266.2 188 67.6
Rhsim03G0172800 Rhododendron simsii HOM05D006795 ORTHO05D008573 2.5e-69 265.8 190 66.3
FAN03G1183 Fragaria x ananassa HOM05D001585 ORTHO05D001677 4.2e-69 265.0 185 65.4
FAN03G1859 Fragaria x ananassa HOM05D001585 ORTHO05D001677 5.5e-69 264.6 185 65.4
PSO478G2429 Papaver somniferum HOM05D006795 ORTHO05D008573 7.2e-69 264.2 185 66.5
Thhalv10014608m.g Eutrema salsugineum HOM05D006795 ORTHO05D008573 9.3e-69 263.8 184 66.8
MD07G1259600 Malus domestica HOM05D006795 ORTHO05D008573 9.3e-69 263.8 184 65.2
BcaC03g14579 Brassica carinata HOM05D006795 ORTHO05D008573 1.6e-68 263.1 183 67.2
C02p20240 Brassica napus HOM05D006795 ORTHO05D008573 1.6e-68 263.1 183 66.7
ClCG11G008970 Citrullus lanatus HOM05D006795 ORTHO05D008573 1.6e-68 263.1 185 64.3
MD01G1187300 Malus domestica HOM05D006795 ORTHO05D008573 1.6e-68 263.1 188 64.4
Gohir.A09G178600 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.1e-68 262.7 180 65.6
Gohir.D09G174200 Gossypium hirsutum HOM05D006795 ORTHO05D008573 2.1e-68 262.7 180 65.6
Gorai.006G196200 Gossypium raimondii HOM05D006795 ORTHO05D008573 2.1e-68 262.7 180 65.6
PSO782G4689 Papaver somniferum HOM05D006795 ORTHO05D008573 2.1e-68 262.7 185 65.4
RcHm_v2.0_Chr1g0375271 Rosa chinensis HOM05D006795 ORTHO05D008573 2.1e-68 262.7 185 65.4
SGA_v2.0_scaffold2G01112 Striga asiatica HOM05D006795 ORTHO05D008573 2.1e-68 262.7 184 67.9
BolC2t08156H Brassica oleracea HOM05D006795 ORTHO05D008573 3.6e-68 261.9 183 66.1
TPR.G26107 Trifolium pratense HOM05D006795 ORTHO05D008573 3.6e-68 261.9 190 64.7
Lsat_1_v5_gn_2_129741 Lactuca sativa HOM05D006795 ORTHO05D008573 7.9e-68 260.8 190 64.2
A02p12140 Brassica napus HOM05D006795 ORTHO05D008573 1.0e-67 260.4 183 66.1
CARHR264540 Cardamine hirsuta HOM05D006795 ORTHO05D008573 1.3e-67 260.0 184 65.8
TWI39G0269 Tripterygium wilfordii HOM05D006795 ORTHO05D008573 1.3e-67 260.0 183 65.6
BraA02t06278Z Brassica rapa HOM05D006795 ORTHO05D008573 5.1e-67 258.1 183 65.6
Carub.0008s1172 Capsella rubella HOM05D006795 ORTHO05D008573 5.1e-67 258.1 183 65.6
A10p09570 Brassica napus HOM05D006795 ORTHO05D008573 6.7e-67 257.7 184 64.1
Cc02_g03780 Coffea canephora HOM05D006795 ORTHO05D008573 6.7e-67 257.7 185 64.9
Lalb_Chr02g0140771 Lupinus albus HOM05D006795 ORTHO05D008573 6.7e-67 257.7 193 63.7
Os02g0535400 Oryza sativa ssp. japonica HOM05D006795 ORTHO05D008573 6.7e-67 257.7 181 65.7
AT5G51700 Arabidopsis thaliana HOM05D006795 ORTHO05D008573 1.5e-66 256.5 183 64.5
BcaB08g35519 Brassica carinata HOM05D006795 ORTHO05D008573 1.5e-66 256.5 183 65.6
BraA10t43032Z Brassica rapa HOM05D006795 ORTHO05D008573 1.5e-66 256.5 184 63.6
CsaV3_2G010830 Cucumis sativus L. HOM05D006795 ORTHO05D008573 1.9e-66 256.1 183 64.5
Psat6g202120 Pisum sativum HOM05D006795 ORTHO05D008573 1.9e-66 256.1 191 63.4
Psat6g202920 Pisum sativum HOM05D006795 ORTHO05D008573 1.9e-66 256.1 191 63.4
AL8G25950 Arabidopsis lyrata HOM05D006795 ORTHO05D008573 2.5e-66 255.8 183 65.0
Sp6g13920 Schrenkiella parvula HOM05D006795 ORTHO05D008573 2.5e-66 255.8 184 62.0
BcaB05g23990 Brassica carinata HOM05D006795 ORTHO05D008573 3.3e-66 255.4 181 64.6
Aqoxy7G00570 Aquilegia oxysepala HOM05D006795 ORTHO05D008573 4.3e-66 255.0 189 64.0
Migut.F00416 Erythranthe guttata HOM05D006795 ORTHO05D008573 4.3e-66 255.0 185 61.6
Atru.chr1.614 Acer truncatum HOM05D006795 ORTHO05D008573 5.7e-66 254.6 184 65.8
Nitab4.5_0000205g0150 Nicotiana tabacum HOM05D006795 ORTHO05D008573 5.7e-66 254.6 190 61.6
SEGI_28069 Sequoiadendron giganteum HOM05D006795 ORTHO05D008573 5.7e-66 254.6 183 62.3
CDE06G1038 Ceratophyllum demersum HOM05D006795 ORTHO05D008573 9.7e-66 253.8 184 63.0
unitig_0.g1164 Utricularia gibba HOM05D006795 ORTHO05D008573 6.3e-65 251.1 187 62.6
Sed0014900 Sechium edule HOM05D006795 ORTHO05D008573 2.4e-64 249.2 180 62.2
Eucgr.A02872 Eucalyptus grandis HOM05D006795 ORTHO05D008573 3.1e-64 248.8 189 61.9
HPP92_005470 Vanilla planifolia HOM05D006795 ORTHO05D008573 1.2e-63 246.9 178 65.2
Zm00001eb242890 Zea mays HOM05D006795 ORTHO05D008573 4.5e-63 245.0 183 62.3
Mapoly0020s0061 Marchantia polymorpha HOM05D006795 ORTHO05D008573 5.9e-63 244.6 185 61.6
FAN01G1007 Fragaria x ananassa HOM05D006795 ORTHO05D008573 7.7e-63 244.2 180 63.3
ATR1145G092 Amborella trichopoda HOM05D006795 ORTHO05D008573 2.2e-62 242.7 198 56.1
Pp3c14_10540 Physcomitrium patens HOM05D006795 ORTHO05D008573 3.3e-58 228.8 185 58.4
CSS0028605 Camellia sinensis var. sinensis HOM05D006795 ORTHO05D008573 2.4e-56 222.6 164 63.4
SalBow4G0392 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.4e-56 222.6 162 64.2
SalBow4G1076 Salvia bowleyana HOM05D006795 ORTHO05D008573 2.4e-56 222.6 162 64.2
Ca_10834_v3 Cicer arietinum L. HOM05D006795 ORTHO05D008573 5.3e-56 221.5 179 60.3
CBR_g32001 Chara braunii HOM05D006795 ORTHO05D008573 7.7e-55 217.6 186 55.4
Oeu042417.2 Olea europaea HOM05D006795 ORTHO05D008573 7.2e-53 211.1 174 60.3
Phvul.007G063300 Phaseolus vulgaris HOM05D006795 ORTHO05D008573 5.7e-50 201.4 141 63.8
VMungo0720G2517 Vigna mungo HOM05D006795 ORTHO05D008573 1.3e-49 200.3 147 62.6
SMO146G0237 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 1.7e-49 199.9 175 52.6
PGSC0003DMG400027380 Solanum tuberosum HOM05D006795 ORTHO05D008573 9.1e-48 194.1 133 66.9
TAR629G1442 Trochodendron aralioides HOM05D006795 ORTHO05D008573 4.2e-45 185.3 162 58.6
MCO02G265 Micromonas commoda HOM05D006795 ORTHO05D008573 5.2e-43 178.3 192 45.8
Zm00001eb181460 Zea mays HOM05D006795 ORTHO05D008573 8.0e-36 154.5 81 74.1
MELO3C008527.2 Cucumis melo HOM05D006795 ORTHO05D008573 2.3e-35 152.9 99 61.6
SMO146G0045 Selaginella moellendorffii HOM05D006795 ORTHO05D008573 9.2e-08 61.2 153 30.7
PRCOL_00002330 Prasinoderma coloniale HOM05D006795 ORTHO05D008573 2.3e-06 56.6 61 34.4


User provided reference genes

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