Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g067520 Amaranthus hybridus HOM05D007548 ORTHO05D009527 1.5e-133 479.6 247 100.0
EL10Ac3g05788 Beta vulgaris HOM05D007548 ORTHO05D009527 9.2e-59 231.1 299 51.8
Ah.07g208330 Amaranthus hybridus HOM05D007548 ORTHO05D009527 2.7e-58 229.6 303 53.5
AUR62016096 Chenopodium quinoa HOM05D007548 ORTHO05D009527 2.7e-50 203.0 299 46.8
AUR62035044 Chenopodium quinoa HOM05D007548 ORTHO05D009527 8.6e-49 198.0 299 45.8
Sc25g0000160 Simmondsia chinensis HOM05D007548 ORTHO05D009527 5.1e-17 92.4 287 33.8
TAR636G2044 Trochodendron aralioides HOM05D007548 ORTHO05D009527 4.3e-16 89.4 232 34.1
Actinidia13550 Actinidia chinensis HOM05D007548 ORTHO05D009527 1.3e-15 87.8 212 38.2
Haze_13820 Corylus avellana HOM05D007548 ORTHO05D009527 1.1e-14 84.7 244 33.2
Cc02_g03840 Coffea canephora HOM05D007548 ORTHO05D009527 2.4e-14 83.6 252 32.5
Duzib068G0425 Durio zibethinus HOM05D007548 ORTHO05D009527 2.4e-14 83.6 243 32.1
Oeu021734.1 Olea europaea HOM05D007548 ORTHO05D009527 5.3e-14 82.4 282 31.2
Oeu021733.1 Olea europaea HOM05D007548 ORTHO05D009527 6.9e-14 82.0 282 31.6
Thecc.03G162900 Theobroma cacao HOM05D007548 ORTHO05D009527 1.2e-13 81.3 271 31.7
CANSAT80G1542 Cannabis sativa HOM05D007548 ORTHO05D009527 1.5e-13 80.9 249 33.3
Actinidia25043 Actinidia chinensis HOM05D007548 ORTHO05D009527 4.5e-13 79.3 211 37.0
TWI39G0023 Tripterygium wilfordii HOM05D007548 ORTHO05D009527 5.0e-12 75.9 262 29.8
FvH4_7g28270 Fragaria vesca HOM05D007548 ORTHO05D009527 1.4e-11 74.3 247 32.4
FAN06G3028 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.4e-11 74.3 247 32.4
FAN06G3476 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.4e-11 74.3 247 32.4
CiPaw.03G097400 Carya illinoinensis HOM05D007548 ORTHO05D009527 2.5e-11 73.6 290 29.7
Nn1g01184 Nelumbo nucifera HOM05D007548 ORTHO05D009527 2.5e-11 73.6 262 30.5
DCAR_018129 Daucus carota HOM05D007548 ORTHO05D009527 3.2e-11 73.2 309 33.0
Potri.015G132000 Populus trichocarpa HOM05D007548 ORTHO05D009527 4.2e-11 72.8 250 32.0
SalBow4G1498 Salvia bowleyana HOM05D007548 ORTHO05D009527 4.2e-11 72.8 282 31.9
SalBow4G2379 Salvia bowleyana HOM05D007548 ORTHO05D009527 5.5e-11 72.4 274 32.8
Gohir.A12G263800 Gossypium hirsutum HOM05D007548 ORTHO05D009527 7.2e-11 72.0 234 34.2
Nn4g26440 Nelumbo nucifera HOM05D007548 ORTHO05D009527 9.3e-11 71.6 264 29.2
FAN01G2764 Fragaria x ananassa HOM05D007548 ORTHO05D009527 1.2e-10 71.2 269 30.5
Peaxi162Scf00192g00096 Petunia axillaris HOM05D007548 ORTHO05D009527 1.2e-10 71.2 259 34.4
MSTRG.27166 Avicennia marina HOM05D007548 ORTHO05D009527 2.7e-10 70.1 258 33.7
FAN03G2953 Fragaria x ananassa HOM05D007548 ORTHO05D009527 3.5e-10 69.7 264 31.4
Manes.06G138600 Manihot esculenta HOM05D007548 ORTHO05D009527 3.5e-10 69.7 240 30.8
RcHm_v2.0_Chr1g0375221 Rosa chinensis HOM05D007548 ORTHO05D009527 4.6e-10 69.3 263 30.8
Prupe.2G283000 Prunus persica HOM05D007548 ORTHO05D009527 6.1e-10 68.9 307 29.6
Lj5g0018367 Lotus japonicus HOM05D007548 ORTHO05D009527 7.9e-10 68.6 296 28.7
Ciclev10007148m.g Citrus clementina HOM05D007548 ORTHO05D009527 1.0e-09 68.2 255 30.2
Cfa008236 Carpinus fangiana HOM05D007548 ORTHO05D009527 1.3e-09 67.8 297 30.6
THA.LOC104798720 Tarenaya hassleriana HOM05D007548 ORTHO05D009527 1.3e-09 67.8 234 33.8
COL.COLO4_14190 Corchorus olitorius HOM05D007548 ORTHO05D009527 5.1e-09 65.9 214 31.8
FAN03G1824 Fragaria x ananassa HOM05D007548 ORTHO05D009527 8.7e-09 65.1 264 30.7
Rhsim03G0172300 Rhododendron simsii HOM05D007548 ORTHO05D009527 1.1e-08 64.7 245 31.8
Eucgr.K00142 Eucalyptus grandis HOM05D007548 ORTHO05D009527 1.5e-08 64.3 251 31.1
Nitab4.5_0008495g0030 Nicotiana tabacum HOM05D007548 ORTHO05D009527 2.5e-08 63.5 264 31.4
Lj8A35G80 Lonicera japonica HOM05D007548 ORTHO05D009527 5.7e-08 62.4 240 30.0
Nitab4.5_0000072g0300 Nicotiana tabacum HOM05D007548 ORTHO05D009527 9.7e-08 61.6 303 31.4
PSO478G0091 Papaver somniferum HOM05D007548 ORTHO05D009527 9.7e-08 61.6 244 30.7
Dinv07997 Davidia involucrata HOM05D007548 ORTHO05D009527 1.3e-07 61.2 202 33.7
Sopen03g003070 Solanum pennellii HOM05D007548 ORTHO05D009527 2.2e-07 60.5 259 32.0
Cpa.g.sc13.212 Carica papaya HOM05D007548 ORTHO05D009527 2.8e-07 60.1 269 32.0
Migut.F00422 Erythranthe guttata HOM05D007548 ORTHO05D009527 2.8e-07 60.1 248 32.3
Psat6g202320 Pisum sativum HOM05D007548 ORTHO05D009527 2.8e-07 60.1 262 32.1
unitig_37.g12505 Utricularia gibba HOM05D007548 ORTHO05D009527 8.2e-07 58.5 236 31.4
HanXRQChr05g0141371 Helianthus annuus HOM05D007548 ORTHO05D009527 1.8e-06 57.4 224 31.2


User provided reference genes

Program Settings