Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g066910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 7.9e-269 929.9 471 100.0
Ah.02g123480 Amaranthus hybridus HOM05D001385 ORTHO05D008760 8.8e-252 873.2 585 80.5
Ah.02g117910 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.5e-214 749.6 552 75.9
Ah.10g025350 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.7e-141 506.9 564 55.9
Ah.02g117390 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.5e-81 307.0 193 85.5
Ah.02g117400 Amaranthus hybridus HOM05D001385 ORTHO05D008760 3.1e-71 273.5 283 58.0
Ah.05g177810 Amaranthus hybridus HOM05D001385 ORTHO05D002073 7.4e-65 252.3 641 31.5
Ah.05g175550 Amaranthus hybridus HOM05D001385 ORTHO05D008760 2.6e-62 243.8 673 30.2
Ah.07g199140 Amaranthus hybridus HOM05D001385 ORTHO05D008760 6.5e-53 212.6 131 87.0
Ah.08g221340 Amaranthus hybridus HOM05D001385 ORTHO05D008760 6.5e-53 212.6 534 34.3
AUR62040137 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.1e-47 193.7 377 32.1
Ah.10g025260 Amaranthus hybridus HOM05D001385 ORTHO05D008760 5.0e-45 186.4 576 30.4
Ah.02g120850 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.4e-44 184.9 240 52.1
AUR62039827 Chenopodium quinoa HOM05D000107 ORTHO05D000062 6.1e-43 179.5 293 34.1
EL10Ac1g01824 Beta vulgaris HOM05D001385 ORTHO05D008760 1.8e-39 167.9 306 32.4
EL10Ac5g11714 Beta vulgaris HOM05D000107 ORTHO05D000062 6.9e-39 166.0 499 28.3
EL10Ac9g20910 Beta vulgaris HOM05D001385 ORTHO05D008760 2.5e-36 157.5 337 29.7
EL10Ac6g14499 Beta vulgaris HOM05D001385 ORTHO05D008760 2.1e-35 154.5 570 25.8
EL10Ac7g18151 Beta vulgaris HOM05D001385 ORTHO05D008760 3.6e-35 153.7 406 28.1
Ah.01g010370 Amaranthus hybridus HOM05D001385 ORTHO05D008760 5.7e-33 146.4 307 33.6
AUR62042768 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.1e-31 139.0 371 28.6
AUR62043185 Chenopodium quinoa HOM05D001385 ORTHO05D008760 9.1e-31 139.0 371 28.6
AUR62013585 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.5e-30 137.1 331 29.0
EL10Ac1g02060 Beta vulgaris HOM05D001385 ORTHO05D008760 4.5e-30 136.7 332 27.4
EL10Ac1g02023 Beta vulgaris HOM05D001385 ORTHO05D008760 6.5e-29 132.9 331 26.6
AUR62043334 Chenopodium quinoa HOM05D001385 ORTHO05D008760 6.5e-29 132.9 371 28.0
AUR62037120 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.7e-27 127.5 273 31.1
AUR62041069 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-26 125.6 250 33.6
EL10Ac7g16607 Beta vulgaris HOM05D001385 ORTHO05D008760 3.0e-26 124.0 523 26.6
AUR62028251 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.1e-25 122.1 223 32.7
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.8e-24 117.5 404 25.5
EL10Ac5g11862 Beta vulgaris HOM05D001385 ORTHO05D008760 5.3e-23 113.2 340 24.7
EL10Ac9g21493 Beta vulgaris HOM05D001385 ORTHO05D004434 4.5e-22 110.2 248 29.8
AUR62034205 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.9e-22 109.8 571 23.3
Sc13g0007340 Simmondsia chinensis HOM05D001385 ORTHO05D004434 5.9e-22 109.8 216 31.5
EL10Ac1g01131 Beta vulgaris HOM05D001385 ORTHO05D008760 7.7e-22 109.4 358 24.3
EL10Ac6g14099 Beta vulgaris HOM05D001385 ORTHO05D008760 7.7e-22 109.4 358 24.3
EL10Ac2g03907 Beta vulgaris HOM05D001385 ORTHO05D008760 1.3e-21 108.6 381 24.4
EL10Ac4g08894 Beta vulgaris HOM05D001385 ORTHO05D008760 5.0e-21 106.7 380 24.2
Ah.02g120890 Amaranthus hybridus HOM05D001385 ORTHO05D008760 1.9e-20 104.8 140 42.9
AUR62002718 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.9e-20 104.8 508 23.2
EL10Ac4g09023 Beta vulgaris HOM05D001385 ORTHO05D008760 3.2e-20 104.0 381 23.9
AUR62034140 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.5e-20 103.2 600 22.2
Hund06374 Selenicereus undatus HOM05D001385 ORTHO05D004434 2.1e-19 101.3 281 26.7
AUR62041104 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.7e-19 100.9 273 27.1
EL10Ac9g21092 Beta vulgaris HOM05D001385 ORTHO05D008760 3.6e-19 100.5 396 24.2
AUR62036601 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-18 99.0 292 27.7
EL10Ac1g01188 Beta vulgaris HOM05D001385 ORTHO05D008760 3.0e-18 97.4 396 24.2
AUR62042851 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.5e-17 95.1 207 29.0
AUR62010149 Chenopodium quinoa HOM05D001385 ORTHO05D004434 2.6e-17 94.4 336 27.1
Hund00070 Selenicereus undatus HOM05D001385 ORTHO05D004434 9.8e-17 92.4 226 28.3
AUR62039729 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.3e-16 92.0 275 26.9
AUR62029692 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.2e-16 91.3 217 27.2
AUR62043798 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.2e-16 91.3 202 27.2
AUR62040146 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.8e-16 90.9 412 23.3
AUR62044135 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.8e-16 90.9 524 23.1
AUR62013317 Chenopodium quinoa HOM05D004522 ORTHO05D008760 8.3e-16 89.4 114 42.1
EL10Ac4g08867 Beta vulgaris HOM05D001385 ORTHO05D008760 1.1e-15 89.0 250 28.0
EL10Ac3g06415 Beta vulgaris HOM05D001385 ORTHO05D008760 1.8e-15 88.2 269 24.9
AUR62005473 Chenopodium quinoa HOM05D001385 ORTHO05D004434 1.8e-15 88.2 125 33.6
Hund20142 Selenicereus undatus HOM05D001385 ORTHO05D008760 1.8e-15 88.2 181 29.8
AUR62016349 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.4e-15 87.8 301 24.9
AUR62005475 Chenopodium quinoa HOM05D001385 ORTHO05D004434 9.1e-15 85.9 234 25.6
Hund24609 Selenicereus undatus HOM05D001385 ORTHO05D008760 9.1e-15 85.9 183 30.1
AUR62037924 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.2e-14 85.5 274 27.7
AUR62036605 Chenopodium quinoa HOM05D001385 ORTHO05D008760 1.0e-13 82.4 114 39.5
Hund07770 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.7e-13 81.6 359 25.9
AUR62030226 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.9e-13 80.9 253 27.7
AUR62042540 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.8e-13 80.5 109 37.6
AUR62014303 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.5e-13 79.3 336 24.1
CSS0004946 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-12 78.6 208 27.4
CSS0011055 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-12 78.6 208 27.4
CSS0042181 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 1.5e-12 78.6 208 27.4
EL10Ac8g19533 Beta vulgaris HOM05D001385 ORTHO05D008760 1.9e-12 78.2 272 22.8
CSS0024690 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.5e-12 77.8 208 27.4
CSS0017872 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.2e-12 77.0 208 26.0
EL10Ac4g08959 Beta vulgaris HOM05D001385 ORTHO05D008760 5.5e-12 76.6 129 31.8
CSS0011333 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 5.5e-12 76.6 208 27.4
AUR62013950 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.5e-12 76.6 226 25.7
EL10Ac7g17195 Beta vulgaris HOM05D000107 ORTHO05D000062 9.4e-12 75.9 124 33.1
Hund10878 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-11 75.1 148 29.1
CSS0007321 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.1e-11 74.7 208 25.5
AUR62020405 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.1e-11 74.7 183 29.5
AUR62026509 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.1e-11 74.7 540 22.0
Sc08g0005020 Simmondsia chinensis HOM05D004066 ORTHO05D004434 2.1e-11 74.7 128 29.7
Hund28976 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-11 73.9 140 30.0
Hund28977 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-11 73.9 140 30.0
Hund29980 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.6e-11 73.9 140 30.0
Gohir.D04G003250 Gossypium hirsutum HOM05D001309 ORTHO05D000385 4.7e-11 73.6 105 31.4
Sc10g0006250 Simmondsia chinensis HOM05D001385 ORTHO05D008760 6.1e-11 73.2 210 27.1
AUR62019603 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.0e-11 72.8 149 34.2
Hund04034 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.0e-11 72.8 136 30.1
Hund18668 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.0e-11 72.8 234 24.4
Hund24360 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.0e-11 72.8 136 30.1
Hund30796 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.0e-11 72.8 136 30.1
Hund13844 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.0e-10 72.4 136 30.1
Hund14635 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.0e-10 72.4 123 31.7
Hund31264 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.4e-10 72.0 136 30.1
EL10Ac8g19748 Beta vulgaris HOM05D001385 ORTHO05D008760 1.8e-10 71.6 130 31.5
Hund14776 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.8e-10 71.6 136 30.1
Hund15061 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.8e-10 71.6 136 29.4
Zm00001eb267220 Zea mays HOM05D008576 ORTHO05D000385 1.8e-10 71.6 118 35.6
Hund11417 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.3e-10 71.2 148 28.4
Hund19649 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.3e-10 71.2 138 29.7
Hund22617 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.3e-10 71.2 136 30.1
Sc11g0008180 Simmondsia chinensis HOM05D001385 ORTHO05D008760 2.3e-10 71.2 131 35.9
Hund20387 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.0e-10 70.9 136 30.1
arahy.Tifrunner.gnm1.ann1.H1PTY0 Arachis hypogaea HOM05D002954 ORTHO05D010308 4.0e-10 70.5 152 27.6
Hund12908 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.0e-10 70.5 123 31.7
Gohir.D10G156350 Gossypium hirsutum HOM05D001309 ORTHO05D000385 6.8e-10 69.7 144 25.7
Nitab4.5_0000804g0010 Nicotiana tabacum HOM05D001309 ORTHO05D000385 8.8e-10 69.3 159 32.7
Hund30132 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.8e-10 69.3 136 28.7
Hund30727 Selenicereus undatus HOM05D004066 ORTHO05D004434 8.8e-10 69.3 136 28.7
Glyma.03G071600 Glycine max HOM05D001309 ORTHO05D000385 2.0e-09 68.2 202 26.2
vmacro03942 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 2.0e-09 68.2 182 29.7
Zm00001eb380870 Zea mays HOM05D008576 ORTHO05D000385 2.6e-09 67.8 118 34.7
AUR62031247 Chenopodium quinoa HOM05D008455 ORTHO05D009597 3.4e-09 67.4 139 31.7
AUR62035309 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.4e-09 67.4 132 32.6
Hund11364 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.4e-09 67.0 136 28.7
COL.COLO4_15532 Corchorus olitorius HOM05D001309 ORTHO05D000385 5.7e-09 66.6 196 26.5
ECA234G2194 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.7e-09 66.6 108 30.6
CSS0031187 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.5e-09 66.2 211 26.5
COL.COLO4_15867 Corchorus olitorius HOM05D001309 ORTHO05D004434 7.5e-09 66.2 196 26.0
Hund26531 Selenicereus undatus HOM05D004066 ORTHO05D004434 7.5e-09 66.2 136 30.1
COL.COLO4_23773 Corchorus olitorius HOM05D001309 ORTHO05D000385 9.8e-09 65.9 119 30.3
AUR62016943 Chenopodium quinoa HOM05D000107 ORTHO05D000062 1.3e-08 65.5 115 27.0
ECA246G4823 Erigeron canadensis HOM05D008488 ORTHO05D000385 1.3e-08 65.5 163 25.8
vmacro03917 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 1.3e-08 65.5 181 28.2
Sc08g0003950 Simmondsia chinensis HOM05D001385 ORTHO05D008760 1.7e-08 65.1 130 30.8
COL.COLO4_29078 Corchorus olitorius HOM05D001309 ORTHO05D000385 2.8e-08 64.3 119 29.4
Hund25713 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.8e-08 64.3 148 28.4
AUR62043841 Chenopodium quinoa HOM05D001385 ORTHO05D008760 3.7e-08 63.9 186 26.3
ECA096G0001 Erigeron canadensis HOM05D008488 ORTHO05D000385 3.7e-08 63.9 126 28.6
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.7e-08 63.9 116 28.4
AUR62042499 Chenopodium quinoa HOM05D001385 ORTHO05D008760 4.9e-08 63.5 149 30.9
MBI09_g33431_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 4.9e-08 63.5 243 23.5
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 4.9e-08 63.5 116 30.2
vmacro22655 Vaccinium macrocarpon HOM05D008488 ORTHO05D000385 4.9e-08 63.5 199 27.1
Atru.chr1.767 Acer truncatum HOM05D001309 ORTHO05D000385 6.3e-08 63.2 178 25.3
EL10Ac4g08702 Beta vulgaris HOM05D001385 ORTHO05D008760 6.3e-08 63.2 113 31.9
AUR62026964 Chenopodium quinoa HOM05D001385 ORTHO05D008760 8.3e-08 62.8 79 39.2
Zm00001eb308920 Zea mays HOM05D008576 ORTHO05D000385 8.3e-08 62.8 111 31.5
Zm00001eb388400 Zea mays HOM05D008576 ORTHO05D000385 8.3e-08 62.8 111 31.5
arahy.Tifrunner.gnm1.ann1.Y6RTQD Arachis hypogaea HOM05D002954 ORTHO05D010308 1.1e-07 62.4 163 25.8
MBI14_g07746_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 62.4 121 29.8
MBI19_g12820_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.1e-07 62.4 121 28.1
arahy.Tifrunner.gnm1.ann1.E8HHXW Arachis hypogaea HOM05D002954 ORTHO05D010308 1.4e-07 62.0 163 25.8
Sc17g0003390 Simmondsia chinensis HOM05D009609 ORTHO05D011572 1.4e-07 62.0 257 20.6
MBI11_g19485_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.8e-07 61.6 110 28.2
Hund06375 Selenicereus undatus HOM05D001385 ORTHO05D004434 1.8e-07 61.6 223 28.3
Rhsim04G0054800 Rhododendron simsii HOM05D001309 ORTHO05D000385 2.4e-07 61.2 197 25.4
Hund01077 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.4e-07 61.2 124 27.4
EL10Ac8g19807 Beta vulgaris HOM05D001385 ORTHO05D008760 3.1e-07 60.8 132 30.3
CSS0000023 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.1e-07 60.8 208 25.0
MBI19_g16213_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-07 60.8 121 28.9
MBI19_g33997_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.1e-07 60.8 121 28.1
Hund18251 Selenicereus undatus HOM05D004066 ORTHO05D004434 3.1e-07 60.8 123 29.3
EL10Ac9g21154 Beta vulgaris HOM05D000593 ORTHO05D000562 4.1e-07 60.5 204 27.0
COL.COLO4_08701 Corchorus olitorius HOM05D001309 ORTHO05D000385 7.0e-07 59.7 226 23.9
MBI17_g16204_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 9.1e-07 59.3 108 29.6
arahy.Tifrunner.gnm1.ann1.2IZ9JW Arachis hypogaea HOM05D002954 ORTHO05D003353 1.2e-06 58.9 319 22.9
MBI03_g15598_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 1.2e-06 58.9 109 28.4
PSO384G4636 Papaver somniferum HOM05D009891 ORTHO05D000385 1.6e-06 58.5 123 22.8
Hund04453 Selenicereus undatus HOM05D004066 ORTHO05D004434 1.6e-06 58.5 100 29.0
EL10Ac9g20863 Beta vulgaris HOM05D001385 ORTHO05D008760 2.0e-06 58.2 171 25.7
CAN.G637.27 Capsicum annuum HOM05D000229 ORTHO05D000385 2.0e-06 58.2 134 32.8
AUR62040186 Chenopodium quinoa HOM05D001385 ORTHO05D004434 2.0e-06 58.2 195 27.2
AUR62044406 Chenopodium quinoa HOM05D001385 ORTHO05D008760 2.0e-06 58.2 104 30.8
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 2.0e-06 58.2 285 24.6
Nn1g01837 Nelumbo nucifera HOM05D006525 ORTHO05D007845 2.0e-06 58.2 131 29.0
MBI15_g13426_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 2.7e-06 57.8 131 26.7
PSO339G1145 Papaver somniferum HOM05D009891 ORTHO05D009626 2.7e-06 57.8 117 24.8
Hund22136 Selenicereus undatus HOM05D001385 ORTHO05D004434 2.7e-06 57.8 197 24.9
Hund30625 Selenicereus undatus HOM05D004066 ORTHO05D004434 2.7e-06 57.8 136 26.5
Sc11g0006000 Simmondsia chinensis HOM05D004066 ORTHO05D004434 2.7e-06 57.8 66 37.9
arahy.Tifrunner.gnm1.ann1.C5M9FF Arachis hypogaea HOM05D002954 ORTHO05D000385 3.5e-06 57.4 121 29.8
Ca_12697_v3 Cicer arietinum L. HOM05D009128 ORTHO05D011389 3.5e-06 57.4 114 29.8
Hund01500 Selenicereus undatus HOM05D004066 ORTHO05D004434 4.5e-06 57.0 136 27.2
AUR62037945 Chenopodium quinoa HOM05D008455 ORTHO05D009597 5.9e-06 56.6 136 27.9
CANSAT21G2150 Cannabis sativa HOM05D001309 ORTHO05D000385 7.7e-06 56.2 201 26.9
AUR62037359 Chenopodium quinoa HOM05D001385 ORTHO05D008760 7.7e-06 56.2 176 26.7
Lj1g0024910 Lotus japonicus HOM05D004615 ORTHO05D007166 7.7e-06 56.2 182 24.2
PSO541G0666 Papaver somniferum HOM05D008576 ORTHO05D000385 7.7e-06 56.2 113 27.4


User provided reference genes

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