Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g066040 Amaranthus hybridus HOM05D010230 ORTHO05D012432 0.0e+00 1160.6 588 100.0
Ah.08g220090 Amaranthus hybridus HOM05D010230 ORTHO05D012432 6.0e-290 1000.3 617 84.8
AUR62040154 Chenopodium quinoa HOM05D010230 ORTHO05D005845 5.0e-111 406.0 298 75.5
AUR62023833 Chenopodium quinoa HOM05D010230 ORTHO05D012432 3.2e-102 376.7 657 38.7
Ah.02g118950 Amaranthus hybridus HOM05D010230 ORTHO05D012432 4.9e-50 203.4 689 26.1
TPR.G36814 Trifolium pratense HOM05D010230 ORTHO05D012432 9.0e-36 156.0 379 31.1
TPR.G52 Trifolium pratense HOM05D010230 ORTHO05D012432 7.6e-35 152.9 266 37.6
AUR62043555 Chenopodium quinoa HOM05D010230 ORTHO05D012432 2.2e-34 151.4 370 30.0
AUR62039156 Chenopodium quinoa HOM05D015386 ORTHO05D020422 8.7e-23 112.8 675 23.4
AUR62043598 Chenopodium quinoa HOM05D015386 ORTHO05D020422 6.2e-21 106.7 454 25.1
Ah.02g119020 Amaranthus hybridus HOM05D010230 ORTHO05D012432 1.8e-20 105.1 277 26.7
SGA_v2.0_scaffold63G21751 Striga asiatica HOM05D010230 ORTHO05D012432 5.3e-20 103.6 329 29.8
Ah.02g119010 Amaranthus hybridus HOM05D010230 ORTHO05D012432 1.2e-19 102.4 242 29.3
Ah.02g119030 Amaranthus hybridus HOM05D010230 ORTHO05D012432 1.2e-19 102.4 242 29.3
TPR.G18004 Trifolium pratense HOM05D010230 ORTHO05D012432 1.0e-18 99.4 303 26.1
TPR.G29587 Trifolium pratense HOM05D010230 ORTHO05D012432 6.5e-18 96.7 341 26.7
AUR62039157 Chenopodium quinoa HOM05D015386 ORTHO05D020422 2.5e-17 94.7 468 25.0
AUR62037400 Chenopodium quinoa HOM05D010230 ORTHO05D012432 5.5e-17 93.6 165 35.2
AUR62022102 Chenopodium quinoa HOM05D000025 ORTHO05D021209 3.0e-15 87.8 447 22.8
TPR.G10790 Trifolium pratense HOM05D010230 ORTHO05D012432 1.5e-14 85.5 160 35.0
Ah.12g061110 Amaranthus hybridus HOM05D010230 ORTHO05D012432 4.3e-14 84.0 204 29.9
AUR62043597 Chenopodium quinoa HOM05D015386 ORTHO05D020422 1.4e-12 79.0 432 22.9
AUR62009540 Chenopodium quinoa HOM05D011280 ORTHO05D013414 3.1e-12 77.8 236 25.0
AUR62020145 Chenopodium quinoa HOM05D000574 ORTHO05D002645 9.0e-12 76.3 250 26.4
AUR62016499 Chenopodium quinoa HOM05D011280 ORTHO05D013414 1.4e-09 68.9 191 28.8
AUR62020195 Chenopodium quinoa HOM05D026522 ORTHO05D021209 3.2e-09 67.8 190 27.4
EL10Ac8g20204 Beta vulgaris HOM05D015386 ORTHO05D012432 4.2e-09 67.4 503 21.7
AUR62001681 Chenopodium quinoa HOM05D011280 ORTHO05D013414 4.2e-09 67.4 263 24.7
AUR62019858 Chenopodium quinoa HOM05D015386 ORTHO05D012432 1.2e-08 65.9 490 23.1
DCAR_000884 Daucus carota HOM05D015386 ORTHO05D020422 6.1e-08 63.5 493 20.5
AUR62020211 Chenopodium quinoa HOM05D011280 ORTHO05D013414 7.9e-08 63.2 425 23.5
Ah.01g015000 Amaranthus hybridus HOM05D010230 ORTHO05D012432 3.9e-07 60.8 93 36.6
DCAR_026345 Daucus carota HOM05D011280 ORTHO05D013414 3.9e-07 60.8 111 36.0
DCAR_026347 Daucus carota HOM05D011280 ORTHO05D013414 3.9e-07 60.8 111 35.1
Ah.02g119080 Amaranthus hybridus HOM05D010230 ORTHO05D012432 1.1e-06 59.3 233 24.5
EL10Ac4g07678 Beta vulgaris HOM05D008244 ORTHO05D009402 2.5e-06 58.2 170 26.5


User provided reference genes

Program Settings