Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.13g065740 Amaranthus hybridus HOM05D019120 ORTHO05D000277 2.8e-100 368.6 190 100.0
Ah.00g001310 Amaranthus hybridus HOM05D000034 ORTHO05D000277 2.9e-84 315.5 202 82.2
Ah.15g094850 Amaranthus hybridus HOM05D000034 ORTHO05D000277 2.9e-84 315.5 202 82.2
Ah.08g223740 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.6e-82 309.7 202 81.2
Ah.02g122110 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.9e-80 302.8 202 79.7
Ah.02g117710 Amaranthus hybridus HOM05D000034 ORTHO05D000277 2.1e-79 299.3 198 78.8
EL10Ac1g02210 Beta vulgaris HOM05D000034 ORTHO05D000277 2.1e-58 229.6 205 61.5
EL10Ac7g16515 Beta vulgaris HOM05D000034 ORTHO05D000277 1.0e-57 227.3 205 61.0
Ah.06g191350 Amaranthus hybridus HOM05D000034 ORTHO05D000277 4.6e-42 175.3 115 78.3
Ah.15g099520 Amaranthus hybridus HOM05D000034 ORTHO05D000277 1.0e-28 131.0 100 69.0
EL10Ac3g06454 Beta vulgaris HOM05D000034 ORTHO05D000277 2.9e-28 129.4 120 59.2
EL10Ac6g14057 Beta vulgaris HOM05D000034 ORTHO05D019535 1.8e-25 120.2 217 37.3
EL10Ac9g22375 Beta vulgaris HOM05D000034 ORTHO05D000037 1.1e-24 117.5 215 35.8
Ah.01g010170 Amaranthus hybridus HOM05D000034 ORTHO05D000277 9.0e-22 107.8 246 31.7
EL10Ac6g15045 Beta vulgaris HOM05D000034 ORTHO05D000277 4.2e-19 99.0 210 33.3
Ah.03g142890 Amaranthus hybridus HOM05D000034 ORTHO05D000277 3.6e-18 95.9 215 34.0
Ah.13g068900 Amaranthus hybridus HOM05D019120 ORTHO05D019535 4.8e-15 85.5 194 30.4
Ah.05g177430 Amaranthus hybridus HOM05D019120 ORTHO05D019535 1.4e-11 73.9 182 32.4
CANSAT21G1104 Cannabis sativa HOM05D008011 ORTHO05D000277 2.7e-10 69.7 220 26.8
FAN10G0151 Fragaria x ananassa HOM05D000034 ORTHO05D000277 3.6e-10 69.3 190 32.1
RcHm_v2.0_Chr6g0284621 Rosa chinensis HOM05D000034 ORTHO05D000277 7.9e-10 68.2 208 28.8
Ah.10g025890 Amaranthus hybridus HOM05D019120 ORTHO05D019535 1.0e-09 67.8 172 33.7
CANSAT56G2768 Cannabis sativa HOM05D008011 ORTHO05D000277 1.4e-09 67.4 216 25.0
RcHm_v2.0_Chr6g0274461 Rosa chinensis HOM05D000034 ORTHO05D000277 5.1e-09 65.5 200 29.0
RcHm_v2.0_Chr1g0343671 Rosa chinensis HOM05D000034 ORTHO05D000277 2.6e-08 63.2 200 29.0
Dinv16912 Davidia involucrata HOM05D012673 ORTHO05D000277 3.3e-08 62.8 174 27.6
Hma1.2p1_0325F.1_g126110 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.3e-08 62.8 195 27.7
Hma1.2p1_2373F.1_g320860 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.4e-08 61.6 198 27.3
FAN15G2888 Fragaria x ananassa HOM05D000034 ORTHO05D000277 1.3e-07 60.8 184 30.4
FAN26G1288 Fragaria x ananassa HOM05D000034 ORTHO05D000277 2.2e-07 60.1 190 29.5
Hma1.2p1_0672F.1_g201070 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.2e-07 60.1 210 25.7
Hma1.2p1_0207F.1_g087800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 2.8e-07 59.7 198 26.8
CANSAT11G2641 Cannabis sativa HOM05D008011 ORTHO05D000277 3.7e-07 59.3 205 24.9
Hma1.2p1_2244F.1_g317920 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 6.3e-07 58.5 198 26.8
Dinv02446 Davidia involucrata HOM05D000034 ORTHO05D000277 1.8e-06 57.0 198 26.3
Ah.10g030380 Amaranthus hybridus HOM05D019120 ORTHO05D019535 3.1e-06 56.2 144 33.3
Hma1.2p1_0084F.1_g043280 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 3.1e-06 56.2 191 26.2
FAN26G0104 Fragaria x ananassa HOM05D000034 ORTHO05D000277 4.1e-06 55.8 191 30.4
EL10Ac2g03585 Beta vulgaris HOM05D000034 ORTHO05D000277 7.0e-06 55.1 221 25.8
AUR62008289 Chenopodium quinoa HOM05D000034 ORTHO05D000277 7.0e-06 55.1 203 29.6


User provided reference genes

Program Settings