Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g064780 Amaranthus hybridus HOM05D007678 ORTHO05D009658 4.8e-141 504.6 276 100.0
EL10Ac2g02701 Beta vulgaris HOM05D007678 ORTHO05D009658 1.3e-85 320.5 229 73.4
Atru.chr2.1713_Atru.chr2.1714 Acer truncatum HOM05D007678 ORTHO05D009658 1.9e-73 280.0 228 65.8
AUR62031676 Chenopodium quinoa HOM05D007678 ORTHO05D009658 1.9e-73 280.0 173 81.5
QL04p021923 Quercus lobata HOM05D007678 ORTHO05D009658 2.1e-72 276.6 217 67.3
Actinidia01693 Actinidia chinensis HOM05D007678 ORTHO05D009658 6.2e-72 275.0 225 63.6
Duzib106G1843 Durio zibethinus HOM05D007678 ORTHO05D009658 8.1e-72 274.6 222 65.3
MD02G1272300 Malus domestica HOM05D007678 ORTHO05D009658 4.0e-71 272.3 220 66.4
TAR623G0324 Trochodendron aralioides HOM05D007678 ORTHO05D009658 4.0e-71 272.3 253 60.1
Medtr7g009670 Medicago truncatula HOM05D007678 ORTHO05D009658 9.9e-70 267.7 239 60.3
Dinv31528 Davidia involucrata HOM05D007678 ORTHO05D009658 1.3e-69 267.3 230 61.7
Potri.001G033500 Populus trichocarpa HOM05D007678 ORTHO05D009658 1.3e-69 267.3 223 64.1
PGSC0003DMG401028118 Solanum tuberosum HOM05D007678 ORTHO05D009658 1.3e-69 267.3 237 61.6
Thecc.10G137600 Theobroma cacao HOM05D007678 ORTHO05D009658 3.8e-69 265.8 209 67.0
Nn7g37012 Nelumbo nucifera HOM05D007678 ORTHO05D009658 4.9e-69 265.4 232 62.5
Sopen10g031780 Solanum pennellii HOM05D007678 ORTHO05D009658 1.1e-68 264.2 238 60.1
Solyc10g081280.2 Solanum lycopersicum HOM05D007678 ORTHO05D009658 1.4e-68 263.8 229 61.6
Haze_02966 Corylus avellana HOM05D007678 ORTHO05D009658 1.9e-68 263.5 233 61.8
Prupe.2G048500 Prunus persica HOM05D007678 ORTHO05D009658 2.4e-68 263.1 211 67.8
Gohir.D10G198600 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.2e-68 262.7 212 65.1
Psat3g196520 Pisum sativum HOM05D007678 ORTHO05D009658 5.4e-68 261.9 230 60.0
Migut.J01589 Erythranthe guttata HOM05D007678 ORTHO05D009658 9.3e-68 261.2 218 61.5
TWI38G1059 Tripterygium wilfordii HOM05D007678 ORTHO05D009658 9.3e-68 261.2 244 57.4
Ca_04109_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.6e-67 260.4 225 61.3
Ca_04118_v3 Cicer arietinum L. HOM05D007678 ORTHO05D009658 1.6e-67 260.4 225 61.3
Gorai.011G222500 Gossypium raimondii HOM05D007678 ORTHO05D009658 6.0e-67 258.5 212 63.7
Sed0019894 Sechium edule HOM05D000001 ORTHO05D000003 1.0e-66 257.7 224 63.4
Hund13420 Selenicereus undatus HOM05D007678 ORTHO05D009658 1.3e-66 257.3 235 60.9
MELO3C034052.2 Cucumis melo HOM05D007678 ORTHO05D009658 1.8e-66 256.9 210 63.3
Lalb_Chr17g0337231 Lupinus albus HOM05D007678 ORTHO05D009658 5.1e-66 255.4 215 62.8
Oeu044217.3 Olea europaea HOM05D007678 ORTHO05D009658 1.1e-65 254.2 265 53.2
SalBow6G2419 Salvia bowleyana HOM05D007678 ORTHO05D009658 1.5e-65 253.8 229 58.5
Lj1g0010481 Lotus japonicus HOM05D007678 ORTHO05D009658 5.6e-65 251.9 210 62.4
RcHm_v2.0_Chr1g0328821 Rosa chinensis HOM05D007678 ORTHO05D009658 2.8e-64 249.6 227 60.4
ATR0307G037 Amborella trichopoda HOM05D007678 ORTHO05D009658 3.1e-63 246.1 213 61.0
FvH4_7g04260 Fragaria vesca HOM05D007678 ORTHO05D009658 3.1e-63 246.1 218 61.9
FAN10G0661 Fragaria x ananassa HOM05D007678 ORTHO05D009658 6.9e-63 245.0 218 61.9
Sc10g0003150 Simmondsia chinensis HOM05D007678 ORTHO05D009658 9.0e-63 244.6 226 61.1
ECA248G0545 Erigeron canadensis HOM05D007678 ORTHO05D009658 2.0e-62 243.4 221 57.0
Lsat_1_v5_gn_7_114920 Lactuca sativa HOM05D007678 ORTHO05D009658 2.0e-62 243.4 263 53.6
Sabra01G0023800 Salix brachista HOM05D007678 ORTHO05D009658 2.6e-62 243.0 272 52.9
HanXRQChr12g0376111 Helianthus annuus HOM05D007678 ORTHO05D009658 4.5e-62 242.3 218 61.5
COL.COLO4_04659 Corchorus olitorius HOM05D007678 ORTHO05D009658 9.9e-62 241.1 237 57.0
Glyma.09G240200 Glycine max HOM05D007678 ORTHO05D009658 1.3e-61 240.7 224 59.4
MBI13_g30074_MAGBIO Magnolia biondii HOM05D007678 ORTHO05D009658 2.2e-61 240.0 225 60.0
Peaxi162Scf00153g00057 Petunia axillaris HOM05D007678 ORTHO05D009658 2.2e-61 240.0 196 63.8
Gohir.A10G190900 Gossypium hirsutum HOM05D007678 ORTHO05D009658 3.8e-61 239.2 195 64.1
QL04p022035 Quercus lobata HOM05D007678 ORTHO05D009658 4.2e-60 235.7 237 57.0
CAN.G128.118 Capsicum annuum HOM05D001269 ORTHO05D001083 7.1e-60 235.0 189 64.0
Manes.04G155050 Manihot esculenta HOM05D007678 ORTHO05D009658 9.3e-60 234.6 298 49.0
PGR031G1114 Punica granatum HOM05D007678 ORTHO05D009658 7.9e-59 231.5 210 61.4
DCAR_001914 Daucus carota HOM05D007678 ORTHO05D009658 1.0e-58 231.1 229 55.5
Eucgr.G03196 Eucalyptus grandis HOM05D007678 ORTHO05D009658 3.9e-58 229.2 224 58.5
Nitab4.5_0008005g0010 Nicotiana tabacum HOM05D007678 ORTHO05D009658 3.9e-58 229.2 180 66.7
unitig_37.g12769 Utricularia gibba HOM05D007678 ORTHO05D009658 1.6e-56 223.8 201 59.2
Nitab4.5_0000062g0570 Nicotiana tabacum HOM05D007678 ORTHO05D009658 2.4e-55 219.9 192 60.4
HPP92_018248 Vanilla planifolia HOM05D007678 ORTHO05D009658 1.2e-54 217.6 221 51.6
arahy.Tifrunner.gnm1.ann1.EB95VJ Arachis hypogaea HOM05D007678 ORTHO05D009658 1.5e-54 217.2 224 57.6
CDE09G0612 Ceratophyllum demersum HOM05D007678 ORTHO05D009658 1.5e-54 217.2 198 57.1
CiPaw.14G011000 Carya illinoinensis HOM05D007678 ORTHO05D009658 2.6e-54 216.5 190 61.6
Zm00001eb303400 Zea mays HOM05D007678 ORTHO05D009658 4.9e-53 212.2 210 53.3
vmacro20847 Vaccinium macrocarpon HOM05D007678 ORTHO05D009658 5.5e-52 208.8 246 51.2
CsaV3_5G029470 Cucumis sativus L. HOM05D007678 ORTHO05D000003 1.2e-51 207.6 163 65.6
FAN06G1516 Fragaria x ananassa HOM05D007678 ORTHO05D009658 1.1e-49 201.1 250 50.8
Rhsim01G0121700 Rhododendron simsii HOM05D007678 ORTHO05D009658 3.7e-48 196.1 149 66.4
Glyma.18G256300 Glycine max HOM05D007678 ORTHO05D009658 7.7e-46 188.3 229 51.1
VMungo1383G0210 Vigna mungo HOM05D000430 ORTHO05D009658 3.2e-44 183.0 154 61.7
Mapoly0003s0067 Marchantia polymorpha HOM05D007678 ORTHO05D009658 1.2e-43 181.0 207 43.0
Pp3c18_7980 Physcomitrium patens HOM05D007678 ORTHO05D009658 2.7e-43 179.9 209 43.1
CBR_g30334 Chara braunii HOM05D007678 ORTHO05D009658 3.6e-43 179.5 205 45.4
SMO174G0167 Selaginella moellendorffii HOM05D007678 ORTHO05D009658 5.3e-39 165.6 195 45.6
Cc06_g20600 Coffea canephora HOM05D007678 ORTHO05D009658 4.2e-36 156.0 158 56.3
TPR.G4277 Trifolium pratense HOM05D007678 ORTHO05D009658 4.7e-35 152.5 139 60.4
arahy.Tifrunner.gnm1.ann1.L3S1G4 Arachis hypogaea HOM05D007678 ORTHO05D009658 6.1e-35 152.1 210 47.1
QL04p021970 Quercus lobata HOM05D007678 ORTHO05D009658 2.8e-32 143.3 155 55.5
Cpa.g.sc33.162 Carica papaya HOM05D007678 ORTHO05D009658 1.2e-30 137.9 98 70.4
CANSAT56G0191 Cannabis sativa HOM05D007678 ORTHO05D009658 3.5e-30 136.3 132 54.5
Phvul.008G043200 Phaseolus vulgaris HOM05D007678 ORTHO05D009658 5.9e-30 135.6 122 59.0
Lsat_1_v5_gn_5_155661 Lactuca sativa HOM05D007678 ORTHO05D009658 7.7e-30 135.2 190 42.6
arahy.Tifrunner.gnm1.ann1.1DGF2A Arachis hypogaea HOM05D007678 ORTHO05D009658 3.0e-26 123.2 94 63.8
TPR.G8973 Trifolium pratense HOM05D007678 ORTHO05D009658 1.1e-25 121.3 98 61.2
Cc06_g20610 Coffea canephora HOM05D007678 ORTHO05D009658 9.1e-23 111.7 89 58.4
arahy.Tifrunner.gnm1.ann1.6E2HM0 Arachis hypogaea HOM05D007678 ORTHO05D009658 1.4e-18 97.8 78 64.1
PRCOL_00006709 Prasinoderma coloniale HOM05D007678 ORTHO05D009658 3.0e-18 96.7 212 30.7
MCO01G505 Micromonas commoda HOM05D007678 ORTHO05D009658 1.4e-15 87.8 205 26.8
CSS0047660 Camellia sinensis var. sinensis HOM05D007678 ORTHO05D009658 5.3e-15 85.9 60 66.7
GSVIVG01012452001 Vitis vinifera HOM05D007678 ORTHO05D009658 1.2e-14 84.7 80 56.2
arahy.Tifrunner.gnm1.ann1.78M82M Arachis hypogaea HOM05D007678 ORTHO05D009658 2.5e-12 77.0 64 62.5
QL04p021975 Quercus lobata HOM05D007678 ORTHO05D009658 7.5e-09 65.5 59 59.3
QL02p047964 Quercus lobata HOM05D007678 ORTHO05D009658 6.3e-08 62.4 59 57.6
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 8.3e-08 62.0 49 61.2
Os07g0222900 Oryza sativa ssp. japonica HOM05D007678 ORTHO05D009658 1.1e-07 61.6 72 47.2
FAN03G1326 Fragaria x ananassa HOM05D001392 ORTHO05D006407 7.7e-06 55.5 50 64.0


User provided reference genes

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