Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g064700 Amaranthus hybridus HOM05D007521 ORTHO05D009387 3.5e-52 208.0 105 100.0
EL10Ac2g02694 Beta vulgaris HOM05D007521 ORTHO05D009387 1.1e-34 149.8 99 74.7
Ciclev10033598m.g Citrus clementina HOM05D007521 ORTHO05D009387 1.2e-28 129.8 89 70.8
Dinv34514 Davidia involucrata HOM05D007521 ORTHO05D009387 2.1e-28 129.0 90 71.1
Actinidia31757 Actinidia chinensis HOM05D007521 ORTHO05D009387 2.3e-27 125.6 92 68.5
Sc11g0006120 Simmondsia chinensis HOM05D007521 ORTHO05D009387 2.0e-26 122.5 93 65.6
TAR636G2090 Trochodendron aralioides HOM05D007521 ORTHO05D009387 2.6e-26 122.1 92 66.3
GSVIVG01032870001 Vitis vinifera HOM05D007521 ORTHO05D009387 6.3e-25 117.5 92 62.0
CiPaw.08G156100 Carya illinoinensis HOM05D007521 ORTHO05D009387 8.2e-25 117.1 87 65.5
Prupe.2G267400 Prunus persica HOM05D007521 ORTHO05D009387 1.4e-24 116.3 87 66.7
Duzib114G0131 Durio zibethinus HOM05D007521 ORTHO05D009387 2.4e-24 115.5 94 59.6
Nn2g10221 Nelumbo nucifera HOM05D007521 ORTHO05D009387 3.1e-24 115.2 94 63.8
Potri.019G065400 Populus trichocarpa HOM05D007521 ORTHO05D009387 3.1e-24 115.2 87 64.4
Thecc.10G187600 Theobroma cacao HOM05D007521 ORTHO05D009387 3.1e-24 115.2 94 60.6
QL08p065346 Quercus lobata HOM05D007521 ORTHO05D009387 5.3e-24 114.4 87 62.1
MD07G1238600 Malus domestica HOM05D007521 ORTHO05D009387 1.2e-23 113.2 97 62.9
Lj1g0021108 Lotus japonicus HOM05D007521 ORTHO05D009387 1.6e-23 112.8 87 63.2
Medtr3g093540 Medicago truncatula HOM05D007521 ORTHO05D009387 1.6e-23 112.8 87 63.2
vmacro09945 Vaccinium macrocarpon HOM05D006307 ORTHO05D008123 2.7e-23 112.1 89 62.9
CANSAT56G2803 Cannabis sativa HOM05D007521 ORTHO05D009387 4.5e-23 111.3 87 64.4
Nitab4.5_0011372g0030 Nicotiana tabacum HOM05D007521 ORTHO05D009387 5.9e-23 110.9 87 60.9
Gohir.D05G278400 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.0e-22 110.2 95 56.8
PSO384G1785 Papaver somniferum HOM05D007521 ORTHO05D009387 1.0e-22 110.2 88 63.6
RcHm_v2.0_Chr1g0372781 Rosa chinensis HOM05D007521 ORTHO05D009387 1.0e-22 110.2 99 58.6
Aqoxy4G03316 Aquilegia oxysepala HOM05D007521 ORTHO05D009387 1.3e-22 109.8 86 64.0
Gorai.009G291900 Gossypium raimondii HOM05D007521 ORTHO05D009387 1.3e-22 109.8 95 56.8
TWI09G0709 Tripterygium wilfordii HOM05D007521 ORTHO05D009387 1.3e-22 109.8 85 63.5
arahy.Tifrunner.gnm1.ann1.Q2LGCQ Arachis hypogaea HOM05D007521 ORTHO05D009387 3.8e-22 108.2 77 64.9
Cc02_g04870 Coffea canephora HOM05D007521 ORTHO05D009387 3.8e-22 108.2 89 65.2
Cc02_g05020 Coffea canephora HOM05D007521 ORTHO05D009387 3.8e-22 108.2 89 66.3
ECA233G6052 Erigeron canadensis HOM05D007521 ORTHO05D009387 3.8e-22 108.2 87 63.2
PGSC0003DMG400011658 Solanum tuberosum HOM05D007521 ORTHO05D009387 6.5e-22 107.5 87 58.6
Gohir.A05G276700 Gossypium hirsutum HOM05D007521 ORTHO05D009387 8.5e-22 107.1 95 53.7
TPR.G13979 Trifolium pratense HOM05D007521 ORTHO05D009387 8.5e-22 107.1 87 60.9
PSO339G2910 Papaver somniferum HOM05D007521 ORTHO05D009387 1.9e-21 105.9 88 62.5
Lalb_Chr11g0067611 Lupinus albus HOM05D007521 ORTHO05D009387 2.5e-21 105.5 88 60.2
FvH4_7g26320 Fragaria vesca HOM05D007521 ORTHO05D009387 5.5e-21 104.4 97 57.7
FAN06G0083 Fragaria x ananassa HOM05D007521 ORTHO05D009387 5.5e-21 104.4 97 57.7
Psat5g070120 Pisum sativum HOM05D007521 ORTHO05D009387 5.5e-21 104.4 87 57.5
FAN10G3062 Fragaria x ananassa HOM05D007521 ORTHO05D009387 9.4e-21 103.6 97 56.7
HanXRQChr08g0223011 Helianthus annuus HOM05D007521 ORTHO05D009387 9.4e-21 103.6 89 59.6
Actinidia07775 Actinidia chinensis HOM05D007521 ORTHO05D009387 1.2e-20 103.2 62 79.0
Gohir.D10G155835 Gossypium hirsutum HOM05D007521 ORTHO05D009387 1.2e-20 103.2 88 56.8
VMungo1309G1947 Vigna mungo HOM05D006307 ORTHO05D008123 1.6e-20 102.8 108 53.7
CDE11G1245 Ceratophyllum demersum HOM05D007521 ORTHO05D009387 2.1e-20 102.4 61 80.3
Nitab4.5_0000375g0330 Nicotiana tabacum HOM05D007521 ORTHO05D009387 2.1e-20 102.4 87 58.6
Cpa.g.sc65.80 Carica papaya HOM05D007521 ORTHO05D009387 3.6e-20 101.7 73 65.8
Atru.BG.268.p Acer truncatum HOM05D007521 ORTHO05D009387 6.1e-20 100.9 62 77.4
Eucgr.G03172 Eucalyptus grandis HOM05D007521 ORTHO05D009387 6.1e-20 100.9 84 60.7
ATR1127G230 Amborella trichopoda HOM05D007521 ORTHO05D009387 1.0e-19 100.1 86 57.0
PGR142G4361 Punica granatum HOM05D007521 ORTHO05D009387 6.8e-19 97.4 87 56.3
Glyma.04G224700 Glycine max HOM05D007521 ORTHO05D009387 8.8e-19 97.1 64 68.8
Ca_16847_v3 Cicer arietinum L. HOM05D006307 ORTHO05D008123 1.2e-18 96.7 63 69.8
THA.LOC104811673 Tarenaya hassleriana HOM05D007521 ORTHO05D009387 2.0e-18 95.9 62 71.0
Migut.F00560 Erythranthe guttata HOM05D007521 ORTHO05D009387 4.4e-18 94.7 87 55.2
Lsat_1_v5_gn_8_11100 Lactuca sativa HOM05D007521 ORTHO05D009387 5.7e-18 94.4 62 72.6
Hma1.2p1_0264F.1_g105770 Hydrangea macrophylla HOM05D007521 ORTHO05D009387 7.5e-18 94.0 62 72.6
MSTRG.8869 Avicennia marina HOM05D007521 ORTHO05D009387 9.8e-18 93.6 87 54.0
CARHR226760 Cardamine hirsuta HOM05D007521 ORTHO05D009387 1.3e-17 93.2 65 66.2
Phvul.009G041300 Phaseolus vulgaris HOM05D007521 ORTHO05D009387 1.3e-17 93.2 64 68.8
Gorai.011G175800 Gossypium raimondii HOM05D007521 ORTHO05D009387 1.7e-17 92.8 86 52.3
Carub.0007s2116 Capsella rubella HOM05D007521 ORTHO05D009387 3.7e-17 91.7 62 67.7
AL7G33920 Arabidopsis lyrata HOM05D007521 ORTHO05D009387 8.3e-17 90.5 62 66.1
Aa31LG6G2400 Aethionema arabicum HOM05D007521 ORTHO05D009387 1.4e-16 89.7 61 67.2
A01p11790 Brassica napus HOM05D007521 ORTHO05D009387 2.0e-15 85.9 62 64.5
C01p13990 Brassica napus HOM05D007521 ORTHO05D009387 2.0e-15 85.9 62 64.5
BolC1t01366H Brassica oleracea HOM05D007521 ORTHO05D009387 2.0e-15 85.9 62 64.5
BraA01t01121Z Brassica rapa HOM05D007521 ORTHO05D009387 2.0e-15 85.9 62 64.5
BcaNung01738 Brassica carinata HOM05D007521 ORTHO05D009387 2.7e-15 85.5 62 64.5
CiPaw.08G155800 Carya illinoinensis HOM05D007521 ORTHO05D009387 3.5e-15 85.1 87 54.0
Sabra19G0079100 Salix brachista HOM05D007521 ORTHO05D009387 3.5e-15 85.1 96 51.0
Sp7g18440 Schrenkiella parvula HOM05D007521 ORTHO05D009387 4.5e-15 84.7 62 62.9
BcaC09g51354 Brassica carinata HOM05D007521 ORTHO05D009387 5.9e-15 84.3 62 62.9
Zm00001eb284340 Zea mays HOM05D007521 ORTHO05D009387 1.0e-14 83.6 61 65.6
SGA_v2.0_scaffold60G20871 Striga asiatica HOM05D006307 ORTHO05D008123 2.2e-14 82.4 97 46.4
Gohir.D11G050600 Gossypium hirsutum HOM05D007521 ORTHO05D009387 4.2e-13 78.2 68 54.4
Gorai.007G054900 Gossypium raimondii HOM05D007521 ORTHO05D009387 1.6e-12 76.3 69 50.7
unitig_37.g11916 Utricularia gibba HOM05D007521 ORTHO05D009387 1.6e-12 76.3 63 60.3
Pp3c3_11210 Physcomitrium patens HOM05D007521 ORTHO05D009387 1.2e-10 70.1 87 43.7
arahy.Tifrunner.gnm1.ann1.RI9J7M Arachis hypogaea HOM05D006307 ORTHO05D008123 1.5e-10 69.7 79 48.1
Mapoly0070s0078 Marchantia polymorpha HOM05D007521 ORTHO05D009387 3.4e-10 68.6 94 41.5
SMO356G0638 Selaginella moellendorffii HOM05D007521 ORTHO05D009387 3.4e-10 68.6 85 44.7
AagrBONN_evm.TU.Sc2ySwM_228.2023 Anthoceros agrestis HOM05D007521 ORTHO05D009387 6.3e-09 64.3 52 55.8
SEGI_20264 Sequoiadendron giganteum HOM05D007521 ORTHO05D009387 8.3e-09 63.9 73 45.2
CSS0047724 Camellia sinensis var. sinensis HOM05D007521 ORTHO05D009387 4.5e-07 58.2 39 69.2
HPP92_019762 Vanilla planifolia HOM05D007521 ORTHO05D009387 1.0e-06 57.0 39 69.2
Peaxi162Scf00167g01120 Petunia axillaris HOM05D007521 ORTHO05D009387 1.3e-06 56.6 39 69.2
DCAR_018052 Daucus carota HOM05D006307 ORTHO05D009387 8.6e-06 53.9 38 63.2


User provided reference genes

Program Settings