Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g061570 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.7e-106 388.7 192 100.0
AUR62015893 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.8e-39 166.0 142 57.7
AUR62034788 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.3e-30 135.2 216 37.0
AUR62038400 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.6e-24 116.3 201 35.3
Ah.12g057670 Amaranthus hybridus HOM05D008188 ORTHO05D010325 7.5e-24 114.8 74 77.0
EL10Ac5g12929 Beta vulgaris HOM05D008188 ORTHO05D010325 4.5e-21 105.5 146 42.5
EL10Ac6g15504 Beta vulgaris HOM05D008188 ORTHO05D010325 2.9e-20 102.8 146 41.1
AUR62015896 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.8e-20 102.4 129 45.7
EL10Ac6g15502 Beta vulgaris HOM05D008188 ORTHO05D010325 8.6e-20 101.3 146 41.8
EL10Ac6g15503 Beta vulgaris HOM05D008188 ORTHO05D010325 8.6e-20 101.3 146 41.8
EL10Ac6g15527 Beta vulgaris HOM05D008188 ORTHO05D010325 3.3e-19 99.4 146 41.8
EL10Ac6g15529 Beta vulgaris HOM05D008188 ORTHO05D010325 3.3e-19 99.4 146 41.8
EL10Ac2g03007 Beta vulgaris HOM05D008188 ORTHO05D010325 5.5e-19 98.6 146 42.5
EL10Ac2g03009 Beta vulgaris HOM05D008188 ORTHO05D010325 5.5e-19 98.6 146 42.5
EL10Ac4g07680 Beta vulgaris HOM05D008188 ORTHO05D010325 5.5e-19 98.6 177 36.2
AUR62024467 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.2e-19 98.2 163 39.3
EL10Ac2g03011 Beta vulgaris HOM05D008188 ORTHO05D010325 9.5e-19 97.8 146 42.5
EL10Ac6g15528 Beta vulgaris HOM05D008188 ORTHO05D010325 9.5e-19 97.8 127 44.1
EL10As8g23832 Beta vulgaris HOM05D008188 ORTHO05D010325 1.6e-18 97.1 143 39.9
EL10Ac6g15505 Beta vulgaris HOM05D008188 ORTHO05D010325 8.0e-18 94.7 170 36.5
EL10As2g23257 Beta vulgaris HOM05D008188 ORTHO05D010325 8.0e-18 94.7 121 45.5
EL10Ac8g19709 Beta vulgaris HOM05D008188 ORTHO05D010325 1.0e-17 94.4 126 42.1
EL10As2g23259 Beta vulgaris HOM05D008188 ORTHO05D010325 1.8e-17 93.6 123 43.9
EL10Ac4g07681 Beta vulgaris HOM05D008188 ORTHO05D010325 3.0e-17 92.8 117 41.9
AUR62026058 Chenopodium quinoa HOM05D008188 ORTHO05D010325 3.0e-17 92.8 147 40.1
Ah.06g182150 Amaranthus hybridus HOM05D008188 ORTHO05D010325 4.0e-17 92.4 76 55.3
EL10Ac4g07719 Beta vulgaris HOM05D008188 ORTHO05D010325 8.9e-17 91.3 174 34.5
AUR62020326 Chenopodium quinoa HOM05D008188 ORTHO05D010325 8.9e-17 91.3 141 41.8
EL10Ac6g15506 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-16 90.1 134 38.8
EL10Ac6g15507 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-16 90.1 134 38.8
EL10Ac6g15508 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-16 90.1 134 38.8
EL10Ac6g15510 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-16 90.1 134 38.8
EL10Ac6g15512 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-16 90.1 134 38.8
EL10Ac6g15513 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-16 90.1 134 38.8
AUR62015897 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.6e-16 89.7 141 40.4
AUR62039716 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.7e-16 88.6 163 38.7
AUR62044614 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.7e-16 88.6 163 38.7
AUR62015890 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.8e-16 87.8 129 39.5
AUR62036266 Chenopodium quinoa HOM05D008188 ORTHO05D010325 9.8e-16 87.8 160 37.5
EL10Ac6g15514 Beta vulgaris HOM05D008188 ORTHO05D010325 1.3e-15 87.4 136 37.5
EL10Ac4g07682 Beta vulgaris HOM05D008188 ORTHO05D010325 4.9e-15 85.5 131 35.1
AUR62015695 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.9e-15 85.5 137 35.8
AUR62015892 Chenopodium quinoa HOM05D008188 ORTHO05D010325 6.3e-15 85.1 135 37.0
EL10Ac4g07667 Beta vulgaris HOM05D008188 ORTHO05D010325 3.1e-14 82.8 142 39.4
EL10Ac4g07713 Beta vulgaris HOM05D008188 ORTHO05D010325 2.0e-13 80.1 198 29.3
EL10Ac4g07670 Beta vulgaris HOM05D001974 ORTHO05D001995 4.5e-13 79.0 125 38.4
AUR62010295 Chenopodium quinoa HOM05D008188 ORTHO05D010325 4.5e-13 79.0 81 50.6
AUR62015894 Chenopodium quinoa HOM05D008188 ORTHO05D010325 7.8e-13 78.2 135 35.6
AUR62041158 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.0e-12 77.8 152 33.6
AUR62010294 Chenopodium quinoa HOM05D008188 ORTHO05D010325 5.0e-12 75.5 125 36.8
EL10Ac8g20539 Beta vulgaris HOM05D008188 ORTHO05D010325 1.9e-11 73.6 187 31.0
Ah.06g181820 Amaranthus hybridus HOM05D008188 ORTHO05D010325 2.8e-10 69.7 125 36.8
vmacro21644 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 2.8e-10 69.7 167 31.1
Lsat_1_v5_gn_0_28421 Lactuca sativa HOM05D000862 ORTHO05D000943 1.2e-08 64.3 113 31.9
Atru.chr1.323 Acer truncatum HOM05D000862 ORTHO05D000943 2.6e-08 63.2 116 40.5
vmacro21642 Vaccinium macrocarpon HOM05D000862 ORTHO05D000943 2.6e-08 63.2 169 30.2
Rhsim06G0033000 Rhododendron simsii HOM05D000862 ORTHO05D000943 9.8e-08 61.2 133 33.1
AUR62029286 Chenopodium quinoa HOM05D008188 ORTHO05D010325 1.3e-07 60.8 121 33.1
Atru.chr11.2300 Acer truncatum HOM05D000862 ORTHO05D000943 1.7e-07 60.5 111 34.2
Lsat_1_v5_gn_0_28361 Lactuca sativa HOM05D000862 ORTHO05D000943 1.7e-07 60.5 112 30.4
AUR62020328 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.2e-07 60.1 167 28.7
AUR62020332 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.2e-07 60.1 167 28.7
AUR62044316 Chenopodium quinoa HOM05D008188 ORTHO05D010325 2.2e-07 60.1 167 28.7
Atru.chr1.3816 Acer truncatum HOM05D002270 ORTHO05D002866 2.9e-07 59.7 110 35.5
Dinv39634 Davidia involucrata HOM05D001418 ORTHO05D002038 4.9e-07 58.9 115 37.4
Lsat_1_v5_gn_7_29740 Lactuca sativa HOM05D000862 ORTHO05D000943 4.9e-07 58.9 140 29.3
Atru.chr1.3869 Acer truncatum HOM05D000862 ORTHO05D000943 6.4e-07 58.5 120 32.5
Atru.chr1.3817 Acer truncatum HOM05D000862 ORTHO05D000943 1.4e-06 57.4 115 35.7
HanXRQChr02g0047121 Helianthus annuus HOM05D000862 ORTHO05D010325 2.4e-06 56.6 167 32.9
Atru.chr13.467 Acer truncatum HOM05D000862 ORTHO05D000943 3.2e-06 56.2 106 31.1
HanXRQChr15g0476781 Helianthus annuus HOM05D000862 ORTHO05D000943 4.1e-06 55.8 115 31.3
Ah.04g166220 Amaranthus hybridus HOM05D008188 ORTHO05D010325 5.4e-06 55.5 63 42.9


User provided reference genes

Program Settings