Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g060580 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.2e-72 276.6 149 100.0
EL10Ac2g02465 Beta vulgaris HOM05D007253 ORTHO05D009055 3.4e-48 195.3 154 74.0
Ah.00g238170 Amaranthus hybridus HOM05D007253 ORTHO05D009055 1.4e-46 189.9 109 100.0
Hund25608 Selenicereus undatus HOM05D007253 ORTHO05D009055 1.2e-45 186.8 153 68.0
Sed0002011 Sechium edule HOM05D007253 ORTHO05D009055 5.8e-32 141.4 132 66.7
TAR626G1108 Trochodendron aralioides HOM05D007253 ORTHO05D009055 5.8e-32 141.4 150 60.0
Sp4g03910 Schrenkiella parvula HOM05D007253 ORTHO05D009055 1.3e-31 140.2 150 60.0
Lj1g0002882 Lotus japonicus HOM05D007253 ORTHO05D009055 2.2e-31 139.4 93 84.9
Sc09g0010780 Simmondsia chinensis HOM05D007253 ORTHO05D009055 4.9e-31 138.3 149 57.7
HanXRQChr13g0413301 Helianthus annuus HOM05D007253 ORTHO05D009055 8.4e-31 137.5 105 77.1
Nn8g40104 Nelumbo nucifera HOM05D007253 ORTHO05D009055 8.4e-31 137.5 159 57.2
CSS0024958 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-30 137.1 106 75.5
CSS0046604 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-30 137.1 154 58.4
CSS0050010 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.1e-30 137.1 154 58.4
ClCG05G016120 Citrullus lanatus HOM05D007253 ORTHO05D009055 1.1e-30 137.1 103 78.6
Manes.03G007000 Manihot esculenta HOM05D007253 ORTHO05D009055 1.1e-30 137.1 149 59.1
CSS0026470 Camellia sinensis var. sinensis HOM05D007253 ORTHO05D009055 1.4e-30 136.7 104 76.0
BcaB06g28020 Brassica carinata HOM05D007253 ORTHO05D009055 1.9e-30 136.3 149 59.7
Atru.chr7.2576 Acer truncatum HOM05D007253 ORTHO05D009055 2.4e-30 136.0 102 73.5
Aa31LG7G11560 Aethionema arabicum HOM05D007253 ORTHO05D009055 2.4e-30 136.0 146 61.6
MELO3C016946.2 Cucumis melo HOM05D007253 ORTHO05D009055 5.4e-30 134.8 103 77.7
Lsat_1_v5_gn_6_77860 Lactuca sativa HOM05D007253 ORTHO05D009055 5.4e-30 134.8 115 71.3
Duzib187G0122 Durio zibethinus HOM05D007253 ORTHO05D009055 7.1e-30 134.4 103 75.7
CANSAT35G1478 Cannabis sativa HOM05D007253 ORTHO05D009055 9.2e-30 134.0 103 77.7
CARHR116800 Cardamine hirsuta HOM05D007253 ORTHO05D009055 9.2e-30 134.0 109 71.6
BcaC02g08395 Brassica carinata HOM05D007253 ORTHO05D009055 1.6e-29 133.3 160 56.9
C04p54740 Brassica napus HOM05D007253 ORTHO05D009055 1.6e-29 133.3 160 56.9
Lalb_Chr23g0268151 Lupinus albus HOM05D007253 ORTHO05D009055 1.6e-29 133.3 102 75.5
BolC4t27019H Brassica oleracea HOM05D007253 ORTHO05D009055 2.1e-29 132.9 160 56.9
A04p19250 Brassica napus HOM05D007253 ORTHO05D009055 2.7e-29 132.5 160 55.6
BraA04t17525Z Brassica rapa HOM05D007253 ORTHO05D009055 2.7e-29 132.5 160 55.6
TWI63G1073 Tripterygium wilfordii HOM05D007253 ORTHO05D009055 3.5e-29 132.1 154 55.8
SalBow8G5515 Salvia bowleyana HOM05D007253 ORTHO05D009055 4.6e-29 131.7 112 70.5
AL4G15950 Arabidopsis lyrata HOM05D007253 ORTHO05D009055 6.0e-29 131.3 101 76.2
AT2G24860 Arabidopsis thaliana HOM05D007253 ORTHO05D009055 6.0e-29 131.3 101 76.2
Thhalv10000367m.g Eutrema salsugineum HOM05D007253 ORTHO05D009055 6.0e-29 131.3 101 77.2
PSO063G6023 Papaver somniferum HOM05D007253 ORTHO05D009055 6.0e-29 131.3 145 59.3
Aqoxy7G03301 Aquilegia oxysepala HOM05D007253 ORTHO05D009055 7.8e-29 131.0 103 60.2
Nitab4.5_0005450g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 7.8e-29 131.0 103 73.8
SGA_v2.0_scaffold4G02163 Striga asiatica HOM05D007253 ORTHO05D009055 1.0e-28 130.6 145 59.3
Actinidia14140 Actinidia chinensis HOM05D007253 ORTHO05D009055 1.7e-28 129.8 105 72.4
ECA240G1715 Erigeron canadensis HOM05D001941 ORTHO05D002198 1.7e-28 129.8 101 73.3
Eucgr.C04033 Eucalyptus grandis HOM05D007253 ORTHO05D009055 1.7e-28 129.8 105 76.2
Ciclev10009764m.g Citrus clementina HOM05D007253 ORTHO05D009055 3.0e-28 129.0 103 73.8
Cc08_g07700 Coffea canephora HOM05D007253 ORTHO05D009055 3.9e-28 128.6 127 63.8
Glyma.04G059900 Glycine max HOM05D007253 ORTHO05D009055 1.1e-27 127.1 101 74.3
Medtr3g105830 Medicago truncatula HOM05D007253 ORTHO05D009055 1.1e-27 127.1 100 75.0
COL.COLO4_18974 Corchorus olitorius HOM05D007253 ORTHO05D009055 1.5e-27 126.7 103 73.8
THA.LOC104803610 Tarenaya hassleriana HOM05D007253 ORTHO05D009055 1.5e-27 126.7 144 59.7
Carub.0004s0449 Capsella rubella HOM05D007253 ORTHO05D009055 1.9e-27 126.3 145 57.2
Nitab4.5_0000264g0020 Nicotiana tabacum HOM05D007253 ORTHO05D009055 1.9e-27 126.3 103 71.8
CAN.G285.13 Capsicum annuum HOM05D007253 ORTHO05D009055 2.5e-27 125.9 103 71.8
PSO782G0429 Papaver somniferum HOM05D007253 ORTHO05D009055 2.5e-27 125.9 145 57.9
arahy.Tifrunner.gnm1.ann1.G7TND8 Arachis hypogaea HOM05D007253 ORTHO05D009055 3.3e-27 125.6 110 70.0
arahy.Tifrunner.gnm1.ann1.LF5WZD Arachis hypogaea HOM05D007253 ORTHO05D009055 3.3e-27 125.6 93 78.5
TPR.G1881 Trifolium pratense HOM05D007253 ORTHO05D009055 3.3e-27 125.6 104 70.2
Cpa.g.sc148.44 Carica papaya HOM05D007253 ORTHO05D009055 5.6e-27 124.8 150 55.3
Glyma.06G060300 Glycine max HOM05D007253 ORTHO05D009055 5.6e-27 124.8 101 74.3
DCAR_000661 Daucus carota HOM05D007253 ORTHO05D009055 7.3e-27 124.4 103 72.8
Glyma.17G221800 Glycine max HOM05D007253 ORTHO05D009055 7.3e-27 124.4 104 73.1
ATR0580G321 Amborella trichopoda HOM05D007253 ORTHO05D009055 9.6e-27 124.0 144 56.9
Phvul.009G086100 Phaseolus vulgaris HOM05D007253 ORTHO05D009055 9.6e-27 124.0 134 61.2
Duzib168G0559 Durio zibethinus HOM05D007253 ORTHO05D009055 1.2e-26 123.6 103 73.8
Os09g0423700 Oryza sativa ssp. japonica HOM05D007253 ORTHO05D009055 1.6e-26 123.2 101 74.3
Oeu023241.1 Olea europaea HOM05D007253 ORTHO05D009055 2.1e-26 122.9 146 56.2
Potri.006G266800 Populus trichocarpa HOM05D007253 ORTHO05D009055 2.1e-26 122.9 148 57.4
Solyc08g006620.3 Solanum lycopersicum HOM05D007253 ORTHO05D009055 2.1e-26 122.9 96 72.9
Sopen08g002570 Solanum pennellii HOM05D007253 ORTHO05D009055 2.1e-26 122.9 96 72.9
Glyma.14G104200 Glycine max HOM05D007253 ORTHO05D009055 2.8e-26 122.5 104 72.1
MBI14_g31385_MAGBIO Magnolia biondii HOM05D007253 ORTHO05D009055 2.8e-26 122.5 95 75.8
Psat5g033080 Pisum sativum HOM05D007253 ORTHO05D009055 3.6e-26 122.1 100 72.0
Thecc.09G013200 Theobroma cacao HOM05D007253 ORTHO05D009055 3.6e-26 122.1 103 71.8
MSTRG.13960 Avicennia marina HOM05D007253 ORTHO05D009055 4.7e-26 121.7 117 67.5
PGR044G0212 Punica granatum HOM05D007253 ORTHO05D009055 4.7e-26 121.7 96 77.1
GSVIVG01035999001 Vitis vinifera HOM05D007253 ORTHO05D009055 4.7e-26 121.7 105 69.5
CiPaw.07G233200 Carya illinoinensis HOM05D007253 ORTHO05D009055 6.2e-26 121.3 103 70.9
Prupe.1G396700 Prunus persica HOM05D007253 ORTHO05D009055 6.2e-26 121.3 155 52.3
FvH4_2g41340 Fragaria vesca HOM05D007253 ORTHO05D009055 1.4e-25 120.2 103 68.9
FAN27G1409 Fragaria x ananassa HOM05D007253 ORTHO05D009055 1.4e-25 120.2 103 68.9
Gohir.D05G063600 Gossypium hirsutum HOM05D007253 ORTHO05D009055 1.4e-25 120.2 103 69.9
Dinv03404 Davidia involucrata HOM05D007253 ORTHO05D009055 1.8e-25 119.8 103 69.9
arahy.Tifrunner.gnm1.ann1.2K72KI Arachis hypogaea HOM05D007253 ORTHO05D009055 3.1e-25 119.0 104 68.3
Potri.018G016400 Populus trichocarpa HOM05D007253 ORTHO05D009055 3.1e-25 119.0 95 73.7
Gorai.009G064300 Gossypium raimondii HOM05D007253 ORTHO05D009055 4.0e-25 118.6 103 69.9
CDE05G3047 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 5.2e-25 118.2 100 72.0
RcHm_v2.0_Chr6g0299201 Rosa chinensis HOM05D007253 ORTHO05D009055 5.2e-25 118.2 103 68.0
Migut.E01444 Erythranthe guttata HOM05D007253 ORTHO05D009055 9.0e-25 117.5 101 71.3
FAN15G3156 Fragaria x ananassa HOM05D007253 ORTHO05D009055 9.0e-25 117.5 103 67.0
unitig_32.g11120 Utricularia gibba HOM05D007253 ORTHO05D009055 9.0e-25 117.5 99 72.7
HPP92_010354 Vanilla planifolia HOM05D007253 ORTHO05D009055 9.0e-25 117.5 100 73.0
Zm00001eb313320 Zea mays HOM05D007253 ORTHO05D009055 1.5e-24 116.7 114 51.8
AUR62032436 Chenopodium quinoa HOM05D007253 ORTHO05D009055 2.0e-24 116.3 77 90.9
MD15G1043300 Malus domestica HOM05D007253 ORTHO05D009055 2.0e-24 116.3 154 52.6
MD08G1052200 Malus domestica HOM05D007253 ORTHO05D009055 2.6e-24 115.9 74 70.3
SEGI_37228 Sequoiadendron giganteum HOM05D007253 ORTHO05D009055 2.6e-24 115.9 88 77.3
vmacro05116 Vaccinium macrocarpon HOM05D007253 ORTHO05D009055 3.4e-24 115.5 180 48.9
AagrBONN_evm.TU.Sc2ySwM_117.2542 Anthoceros agrestis HOM05D007253 ORTHO05D009055 8.4e-23 110.9 93 69.9
CDE02G4354 Ceratophyllum demersum HOM05D007253 ORTHO05D009055 1.1e-22 110.5 91 72.5
Mapoly0121s0030 Marchantia polymorpha HOM05D007253 ORTHO05D009055 5.4e-22 108.2 103 63.1
Pp3c6_11160 Physcomitrium patens HOM05D007253 ORTHO05D009055 2.1e-21 106.3 100 62.0
TAR383G0216 Trochodendron aralioides HOM05D007253 ORTHO05D009055 2.7e-21 105.9 78 79.5
PGSC0003DMG400026305 Solanum tuberosum HOM05D005612 ORTHO05D007014 5.1e-20 101.7 75 78.7
Peaxi162Scf00045g01937 Petunia axillaris HOM05D007253 ORTHO05D009055 4.3e-19 98.6 86 70.9
SMO196G0205 Selaginella moellendorffii HOM05D007253 ORTHO05D009055 4.3e-19 98.6 81 71.6
Oeu010291.1 Olea europaea HOM05D007253 ORTHO05D009055 7.1e-06 54.7 57 43.9


User provided reference genes

Program Settings