Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g060530 Amaranthus hybridus HOM05D000552 ORTHO05D061656 3.6e-55 218.0 110 100.0
Ah.10g025790 Amaranthus hybridus HOM05D000552 ORTHO05D000469 7.5e-29 130.6 97 70.1
AUR62024844 Chenopodium quinoa HOM05D000552 ORTHO05D000469 3.7e-28 128.3 98 66.3
AUR62032374 Chenopodium quinoa HOM05D000552 ORTHO05D000469 2.3e-25 119.0 96 63.5
AUR62032375 Chenopodium quinoa HOM05D000552 ORTHO05D000469 3.9e-25 118.2 96 63.5
EL10Ac2g02544 Beta vulgaris HOM05D000552 ORTHO05D000469 2.5e-24 115.5 92 68.5
Hund25666 Selenicereus undatus HOM05D000552 ORTHO05D000469 2.9e-20 102.1 86 60.5
Sc09g0008810 Simmondsia chinensis HOM05D000552 ORTHO05D000469 4.7e-15 84.7 102 51.0
Prupe.1G467200 Prunus persica HOM05D000552 ORTHO05D000469 2.0e-13 79.3 95 51.6
CSS0035189 Camellia sinensis var. sinensis HOM05D000552 ORTHO05D037995 1.3e-12 76.6 99 46.5
MD15G1115900 Malus domestica HOM05D000552 ORTHO05D000469 8.4e-12 73.9 100 45.0
Potri.018G034100 Populus trichocarpa HOM05D000552 ORTHO05D000469 1.4e-11 73.2 95 51.6
Eucgr.C02858 Eucalyptus grandis HOM05D000552 ORTHO05D000469 2.4e-11 72.4 101 43.6
CiPaw.08G015200 Carya illinoinensis HOM05D000552 ORTHO05D000469 1.2e-10 70.1 101 44.6
TAR383G0984 Trochodendron aralioides HOM05D000552 ORTHO05D000469 1.2e-10 70.1 99 40.4
Sabra18G0034800 Salix brachista HOM05D000552 ORTHO05D000469 1.6e-10 69.7 93 49.5
Oeu045180.1 Olea europaea HOM05D000552 ORTHO05D000469 2.1e-10 69.3 94 45.7
MD17G1198500 Malus domestica HOM05D000552 ORTHO05D000469 3.5e-10 68.6 97 46.4
Sabra06G0193400 Salix brachista HOM05D000552 ORTHO05D000469 6.0e-10 67.8 98 43.9
Manes.03G065100 Manihot esculenta HOM05D000552 ORTHO05D000469 1.0e-09 67.0 103 45.6
Atru.chr7.2330 Acer truncatum HOM05D000552 ORTHO05D000469 1.7e-09 66.2 101 46.5
Peaxi162Scf01554g00011 Petunia axillaris HOM05D000552 ORTHO05D000469 2.3e-09 65.9 98 45.9
MD09G1216400 Malus domestica HOM05D000552 ORTHO05D000469 3.9e-09 65.1 97 45.4
Cc08_g08360 Coffea canephora HOM05D000552 ORTHO05D000469 5.1e-09 64.7 88 44.3
COL.COLO4_30320 Corchorus olitorius HOM05D000552 ORTHO05D000469 5.1e-09 64.7 97 43.3
MD08G1137300 Malus domestica HOM05D000552 ORTHO05D000469 5.1e-09 64.7 100 41.0
Rhsim02G0188000 Rhododendron simsii HOM05D000552 ORTHO05D000469 5.1e-09 64.7 100 45.0
CAN.G199.59 Capsicum annuum HOM05D000552 ORTHO05D000469 6.6e-09 64.3 99 44.4
Prupe.3G075200 Prunus persica HOM05D000552 ORTHO05D000469 6.6e-09 64.3 97 42.3
Solyc06g065680.3 Solanum lycopersicum HOM05D000552 ORTHO05D000469 8.7e-09 63.9 99 43.4
Sopen06g024200 Solanum pennellii HOM05D000552 ORTHO05D000469 8.7e-09 63.9 99 43.4
PGSC0003DMG400026091 Solanum tuberosum HOM05D000552 ORTHO05D000469 8.7e-09 63.9 99 43.4
CSS0032404 Camellia sinensis var. sinensis HOM05D000552 ORTHO05D000469 1.1e-08 63.5 95 46.3
Thecc.06G081600 Theobroma cacao HOM05D000552 ORTHO05D000469 1.1e-08 63.5 97 42.3
TWI63G1487 Tripterygium wilfordii HOM05D000552 ORTHO05D000469 1.5e-08 63.2 100 42.0
Potri.006G247200 Populus trichocarpa HOM05D000552 ORTHO05D000469 1.9e-08 62.8 93 43.0
Ciclev10008128m.g Citrus clementina HOM05D000552 ORTHO05D000469 2.5e-08 62.4 102 43.1
QL12p031365 Quercus lobata HOM05D000552 ORTHO05D000469 2.5e-08 62.4 90 45.6
Haze_21618 Corylus avellana HOM05D000552 ORTHO05D000469 4.3e-08 61.6 101 41.6
Actinidia13427 Actinidia chinensis HOM05D000552 ORTHO05D037995 9.6e-08 60.5 78 46.2
TAR636G0678 Trochodendron aralioides HOM05D000552 ORTHO05D000469 9.6e-08 60.5 88 40.9
Cfa021482 Carpinus fangiana HOM05D000552 ORTHO05D000469 1.3e-07 60.1 101 41.6
Gorai.009G011300 Gossypium raimondii HOM05D000552 ORTHO05D000469 1.6e-07 59.7 98 42.9
MBI01_g18223_MAGBIO Magnolia biondii HOM05D000552 ORTHO05D000469 2.1e-07 59.3 88 44.3
CANSAT25G2347 Cannabis sativa HOM05D000552 ORTHO05D000469 2.8e-07 58.9 74 48.6
Duzib235G0186 Durio zibethinus HOM05D000552 ORTHO05D000469 3.6e-07 58.5 97 40.2
Gohir.A05G010200 Gossypium hirsutum HOM05D000552 ORTHO05D000469 3.6e-07 58.5 100 43.0
Sed0010399 Sechium edule HOM05D000552 ORTHO05D000469 3.6e-07 58.5 96 43.8
FAN15G1159 Fragaria x ananassa HOM05D000552 ORTHO05D000469 4.8e-07 58.2 83 49.4
FAN27G2839 Fragaria x ananassa HOM05D000552 ORTHO05D000469 4.8e-07 58.2 83 49.4
vmacro11121 Vaccinium macrocarpon HOM05D000552 ORTHO05D000469 4.8e-07 58.2 113 38.9
ECA233G3597 Erigeron canadensis HOM05D000552 ORTHO05D000469 8.1e-07 57.4 91 44.0
Migut.A00279 Erythranthe guttata HOM05D000552 ORTHO05D000469 8.1e-07 57.4 96 39.6
FAN20G2568 Fragaria x ananassa HOM05D000552 ORTHO05D000469 8.1e-07 57.4 83 49.4
Gohir.D05G019600 Gossypium hirsutum HOM05D000552 ORTHO05D000469 8.1e-07 57.4 98 42.9
SGA_v2.0_scaffold448G51782 Striga asiatica HOM05D000552 ORTHO05D000469 8.1e-07 57.4 86 37.2
COL.COLO4_24050 Corchorus olitorius HOM05D000552 ORTHO05D000469 1.1e-06 57.0 100 42.0
FAN02G3566 Fragaria x ananassa HOM05D000552 ORTHO05D000469 1.1e-06 57.0 100 40.0
SGA_v2.0_scaffold27G11486 Striga asiatica HOM05D000552 ORTHO05D000469 1.4e-06 56.6 90 35.6
TWI32G1067 Tripterygium wilfordii HOM05D000552 ORTHO05D000469 1.4e-06 56.6 85 43.5
FvH4_6g30830 Fragaria vesca HOM05D000552 ORTHO05D000469 1.8e-06 56.2 100 40.0
Thecc.09G144700 Theobroma cacao HOM05D000552 ORTHO05D000469 1.8e-06 56.2 100 42.0
Duzib168G1621 Durio zibethinus HOM05D000552 ORTHO05D000469 2.4e-06 55.8 103 40.8
FvH4_2g30100 Fragaria vesca HOM05D000552 ORTHO05D000469 2.4e-06 55.8 83 49.4
FAN24G3400 Fragaria x ananassa HOM05D000552 ORTHO05D000469 2.4e-06 55.8 83 49.4
Hma1.2p1_0175F.1_g077150 Hydrangea macrophylla HOM05D000552 ORTHO05D000469 2.4e-06 55.8 97 39.2
FAN14G2242 Fragaria x ananassa HOM05D000552 ORTHO05D000469 3.1e-06 55.5 100 40.0
Aqoxy7G03781 Aquilegia oxysepala HOM05D000552 ORTHO05D000469 4.0e-06 55.1 90 45.6
Cpa.g.sc91.13 Carica papaya HOM05D000552 ORTHO05D000469 5.3e-06 54.7 87 44.8
ClCG09G002380 Citrullus lanatus HOM05D000552 ORTHO05D000469 5.3e-06 54.7 101 40.6
DCAR_026303 Daucus carota HOM05D000552 ORTHO05D000469 5.3e-06 54.7 94 39.4
PGR044G0868 Punica granatum HOM05D000552 ORTHO05D000469 5.3e-06 54.7 89 42.7
BcaC06g36640 Brassica carinata HOM05D000552 ORTHO05D000469 6.9e-06 54.3 98 34.7
HanXRQChr02g0048311 Helianthus annuus HOM05D000552 ORTHO05D000469 6.9e-06 54.3 97 40.2
Lj5A63T68 Lonicera japonica HOM05D000552 ORTHO05D000469 6.9e-06 54.3 84 40.5
Thhalv10018503m.g Eutrema salsugineum HOM05D000552 ORTHO05D000469 9.0e-06 53.9 99 33.3
RcHm_v2.0_Chr2g0137271 Rosa chinensis HOM05D000552 ORTHO05D000469 9.0e-06 53.9 103 40.8
Sed0006298 Sechium edule HOM05D000552 ORTHO05D000469 9.0e-06 53.9 100 41.0


User provided reference genes

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