Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g056690 Amaranthus hybridus HOM05D006632 ORTHO05D008224 9.7e-127 456.8 232 100.0
EL10Ac5g13049 Beta vulgaris HOM05D006632 ORTHO05D008224 4.5e-100 368.2 226 81.0
AUR62039953 Chenopodium quinoa HOM05D006632 ORTHO05D008224 5.5e-98 361.3 223 82.1
AUR62007500 Chenopodium quinoa HOM05D006632 ORTHO05D008224 5.2e-96 354.8 224 79.9
Prupe.5G072600 Prunus persica HOM05D006632 ORTHO05D008224 2.2e-86 322.8 231 71.9
PSO782G3692 Papaver somniferum HOM05D006632 ORTHO05D008224 1.1e-85 320.5 231 68.8
Nn6g34002 Nelumbo nucifera HOM05D006632 ORTHO05D008224 4.1e-85 318.5 225 72.0
Sopen08g003360 Solanum pennellii HOM05D006632 ORTHO05D008224 9.2e-85 317.4 228 68.9
PSO063G6697 Papaver somniferum HOM05D006632 ORTHO05D008224 3.5e-84 315.5 231 68.4
Rhsim07G0107100 Rhododendron simsii HOM05D006632 ORTHO05D008224 4.6e-84 315.1 229 69.9
GSVIVG01001305001 Vitis vinifera HOM05D006632 ORTHO05D008224 1.0e-83 313.9 228 70.2
Hma1.2p1_0916F.1_g236520 Hydrangea macrophylla HOM05D006632 ORTHO05D008224 5.0e-83 311.6 229 69.9
Gohir.D12G222100 Gossypium hirsutum HOM05D006632 ORTHO05D008224 6.6e-83 311.2 229 70.7
Lsat_1_v5_gn_6_91561 Lactuca sativa HOM05D006632 ORTHO05D008224 8.6e-83 310.8 227 69.6
Duzib205G0315 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-82 310.5 226 69.9
Solyc08g007410.4 Solanum lycopersicum HOM05D006632 ORTHO05D008224 1.1e-82 310.5 224 68.8
VMungo0251G2371 Vigna mungo HOM05D006632 ORTHO05D008224 1.1e-82 310.5 233 69.5
Ciclev10022042m.g Citrus clementina HOM05D006632 ORTHO05D008224 1.5e-82 310.1 231 69.7
Nitab4.5_0004059g0060 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.9e-82 309.7 235 66.0
PGSC0003DMG400012506 Solanum tuberosum HOM05D006632 ORTHO05D008224 3.3e-82 308.9 228 68.0
CiPaw.11G152400 Carya illinoinensis HOM05D006632 ORTHO05D008224 4.3e-82 308.5 235 68.9
Gorai.008G238100 Gossypium raimondii HOM05D006632 ORTHO05D008224 4.3e-82 308.5 229 70.3
Lj4g0001078 Lotus japonicus HOM05D006632 ORTHO05D008224 4.3e-82 308.5 230 66.5
Glyma.05G058200 Glycine max HOM05D006632 ORTHO05D008224 5.6e-82 308.1 232 68.1
Manes.01G079200 Manihot esculenta HOM05D006632 ORTHO05D008224 9.5e-82 307.4 234 68.8
RcHm_v2.0_Chr7g0202881 Rosa chinensis HOM05D006632 ORTHO05D008224 9.5e-82 307.4 227 69.2
CANSAT21G1011 Cannabis sativa HOM05D006632 ORTHO05D008224 1.2e-81 307.0 224 70.1
TWI81G0482 Tripterygium wilfordii HOM05D006632 ORTHO05D008224 1.6e-81 306.6 232 68.1
ECA240G2825 Erigeron canadensis HOM05D006632 ORTHO05D008224 2.1e-81 306.2 229 65.9
Oeu062975.1 Olea europaea HOM05D006632 ORTHO05D008224 2.8e-81 305.8 228 68.4
Thecc.03G254100 Theobroma cacao HOM05D006632 ORTHO05D008224 2.8e-81 305.8 227 69.6
Cfa012746 Carpinus fangiana HOM05D006632 ORTHO05D008224 3.6e-81 305.4 231 68.4
Gohir.A12G219900 Gossypium hirsutum HOM05D006632 ORTHO05D008224 4.7e-81 305.1 229 69.9
CSS0044555 Camellia sinensis var. sinensis HOM05D006632 ORTHO05D008224 6.2e-81 304.7 241 66.8
Nitab4.5_0001707g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 6.2e-81 304.7 238 66.0
Aqoxy5G03914 Aquilegia oxysepala HOM05D006632 ORTHO05D008224 1.4e-80 303.5 228 67.5
TPR.G37669 Trifolium pratense HOM05D006632 ORTHO05D008224 1.4e-80 303.5 228 68.0
MELO3C013948.2 Cucumis melo HOM05D006632 ORTHO05D008224 2.3e-80 302.8 223 68.6
Actinidia05199 Actinidia chinensis HOM05D006632 ORTHO05D008224 3.1e-80 302.4 232 67.2
FAN18G2132 Fragaria x ananassa HOM05D006632 ORTHO05D008224 4.0e-80 302.0 228 68.4
Lj2A215T22 Lonicera japonica HOM05D006632 ORTHO05D008224 4.0e-80 302.0 224 68.3
Phvul.003G219500 Phaseolus vulgaris HOM05D006632 ORTHO05D008224 5.2e-80 301.6 226 66.8
Sed0019633 Sechium edule HOM05D006632 ORTHO05D008224 5.2e-80 301.6 221 67.4
Cc08_g12700 Coffea canephora HOM05D006632 ORTHO05D008224 6.8e-80 301.2 231 67.1
Psat4g070160 Pisum sativum HOM05D006632 ORTHO05D008224 6.8e-80 301.2 227 68.3
MSTRG.25531 Avicennia marina HOM05D006632 ORTHO05D008224 8.9e-80 300.8 228 68.4
Migut.A00961 Erythranthe guttata HOM05D006632 ORTHO05D008224 1.5e-79 300.1 238 65.1
DCAR_027784 Daucus carota HOM05D006632 ORTHO05D008224 2.6e-79 299.3 238 66.0
ClCG10G002780 Citrullus lanatus HOM05D006632 ORTHO05D008224 3.4e-79 298.9 227 67.4
Haze_07882 Corylus avellana HOM05D006632 ORTHO05D008224 3.4e-79 298.9 221 69.7
arahy.Tifrunner.gnm1.ann1.E5X9TE Arachis hypogaea HOM05D006632 ORTHO05D008224 4.4e-79 298.5 226 67.7
Potri.003G111100 Populus trichocarpa HOM05D006632 ORTHO05D008224 5.8e-79 298.1 227 66.5
HanXRQChr03g0088651 Helianthus annuus HOM05D006632 ORTHO05D008224 7.5e-79 297.7 219 68.9
Potri.008G135980 Populus trichocarpa HOM05D006632 ORTHO05D008224 7.5e-79 297.7 231 65.8
Atru.chr9.1340 Acer truncatum HOM05D006632 ORTHO05D008224 2.2e-78 296.2 228 67.1
arahy.Tifrunner.gnm1.ann1.UQJ0AM Arachis hypogaea HOM05D006632 ORTHO05D008224 3.7e-78 295.4 226 67.3
Aa31LG2G12620 Aethionema arabicum HOM05D006632 ORTHO05D008224 6.4e-78 294.7 221 67.0
PGR042G2887 Punica granatum HOM05D006632 ORTHO05D008224 6.4e-78 294.7 231 66.2
vmacro14091 Vaccinium macrocarpon HOM05D006632 ORTHO05D008224 6.4e-78 294.7 274 59.1
A08p12540 Brassica napus HOM05D006632 ORTHO05D008224 8.3e-78 294.3 221 68.3
BraA08t33245Z Brassica rapa HOM05D006632 ORTHO05D008224 8.3e-78 294.3 221 68.3
Nitab4.5_0000312g0210 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.1e-77 293.9 224 65.6
Carub.0007s2499 Capsella rubella HOM05D006632 ORTHO05D008224 1.4e-77 293.5 233 64.4
AL7G38450 Arabidopsis lyrata HOM05D006632 ORTHO05D008224 4.1e-77 292.0 223 67.3
BolC8t48376H Brassica oleracea HOM05D006632 ORTHO05D008224 4.1e-77 292.0 229 66.4
CsaV3_3G002820 Cucumis sativus L. HOM05D006632 ORTHO05D008224 5.4e-77 291.6 221 65.6
Medtr4g101100 Medicago truncatula HOM05D006632 ORTHO05D008224 7.0e-77 291.2 229 65.9
THA.LOC104814709 Tarenaya hassleriana HOM05D006632 ORTHO05D008224 7.0e-77 291.2 221 68.3
CARHR222910 Cardamine hirsuta HOM05D006632 ORTHO05D008224 9.2e-77 290.8 222 67.6
AT4G16510 Arabidopsis thaliana HOM05D006632 ORTHO05D008224 1.6e-76 290.0 235 64.7
Thhalv10026162m.g Eutrema salsugineum HOM05D006632 ORTHO05D008224 1.6e-76 290.0 221 66.5
FAN08G0873 Fragaria x ananassa HOM05D006632 ORTHO05D008224 1.0e-75 287.3 236 63.6
Sp7g15070 Schrenkiella parvula HOM05D006632 ORTHO05D008224 1.3e-75 287.0 221 65.2
FAN04G0341 Fragaria x ananassa HOM05D006632 ORTHO05D008224 3.0e-75 285.8 236 64.0
Rhsim07G0106500 Rhododendron simsii HOM05D006632 ORTHO05D008224 3.0e-75 285.8 296 54.4
Lalb_Chr05g0225741 Lupinus albus HOM05D006632 ORTHO05D008224 3.9e-75 285.4 226 64.6
MD06G1061300 Malus domestica HOM05D006632 ORTHO05D008224 3.9e-75 285.4 229 65.5
HPP92_014478 Vanilla planifolia HOM05D006632 ORTHO05D008224 6.6e-75 284.6 227 65.2
Eucgr.E00435 Eucalyptus grandis HOM05D006632 ORTHO05D008224 8.6e-75 284.3 238 63.4
CDE02G1947 Ceratophyllum demersum HOM05D006632 ORTHO05D008224 1.9e-74 283.1 202 70.3
CAN.G1227.10 Capsicum annuum HOM05D006632 ORTHO05D008224 9.5e-74 280.8 178 74.7
FAN13G0450 Fragaria x ananassa HOM05D006632 ORTHO05D008224 9.5e-74 280.8 251 61.0
Hund14588 Selenicereus undatus HOM05D006632 ORTHO05D008224 9.5e-74 280.8 386 45.9
Sabra03G0077000 Salix brachista HOM05D006632 ORTHO05D008224 2.8e-73 279.3 265 57.4
Sc01g0008570 Simmondsia chinensis HOM05D006632 ORTHO05D008224 2.6e-71 272.7 163 79.1
SGA_v2.0_scaffold120G32870 Striga asiatica HOM05D006632 ORTHO05D008224 5.8e-71 271.6 288 53.5
Os02g0662200 Oryza sativa ssp. japonica HOM05D006632 ORTHO05D008224 1.3e-70 270.4 225 60.4
Pp3c24_4050 Physcomitrium patens HOM05D006632 ORTHO05D008224 1.3e-70 270.4 247 57.5
SEGI_31519 Sequoiadendron giganteum HOM05D006632 ORTHO05D008224 4.1e-69 265.4 226 60.6
Dinv21617 Davidia involucrata HOM05D006632 ORTHO05D008224 1.6e-68 263.5 224 61.2
unitig_27.g25096 Utricularia gibba HOM05D006632 ORTHO05D008224 1.6e-68 263.5 203 64.0
Zm00001eb249830 Zea mays HOM05D006632 ORTHO05D008224 3.9e-67 258.8 231 55.8
BcaC07g37993 Brassica carinata HOM05D006632 ORTHO05D008224 5.1e-67 258.5 203 67.0
Peaxi162Scf00102g01151 Petunia axillaris HOM05D006632 ORTHO05D008224 7.3e-66 254.6 233 58.4
Mapoly0121s0036 Marchantia polymorpha HOM05D006632 ORTHO05D008224 3.1e-64 249.2 178 68.0
SMO143G0241 Selaginella moellendorffii HOM05D006632 ORTHO05D008224 3.4e-63 245.7 212 56.6
MD00G1115100 Malus domestica HOM05D006632 ORTHO05D008224 4.1e-61 238.8 245 55.5
QL12p012693 Quercus lobata HOM05D006632 ORTHO05D008224 4.6e-60 235.3 183 67.2
DCAR_004945 Daucus carota HOM05D006632 ORTHO05D008224 5.6e-58 228.4 226 54.0
CBR_g26463 Chara braunii HOM05D006632 ORTHO05D008224 1.1e-56 224.2 185 60.0
Nitab4.5_0017825g0010 Nicotiana tabacum HOM05D006632 ORTHO05D008224 1.5e-55 220.3 185 61.1
Cre07.g338250 Chlamydomonas reinhardtii HOM05D006632 ORTHO05D008224 3.9e-43 179.1 182 47.8
SalBow6G7145 Salvia bowleyana HOM05D006632 ORTHO05D008224 1.9e-42 176.8 153 64.1
Ca_21955_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 1.4e-40 170.6 152 61.8
Ca_22220_v3 Cicer arietinum L. HOM05D006632 ORTHO05D008224 3.1e-40 169.5 175 54.3
ATR0564G418 Amborella trichopoda HOM05D006632 ORTHO05D008224 1.9e-37 160.2 209 48.8
C01p26240 Brassica napus HOM05D006632 ORTHO05D008224 8.7e-35 151.4 132 60.6
BolC1t02568H Brassica oleracea HOM05D006632 ORTHO05D008224 8.7e-35 151.4 132 60.6
PRCOL_00001140 Prasinoderma coloniale HOM05D006632 ORTHO05D008224 5.3e-32 142.1 211 37.4
MCO15G182 Micromonas commoda HOM05D006632 ORTHO05D008224 9.0e-32 141.4 189 39.2
Dinv39125 Davidia involucrata HOM05D006632 ORTHO05D008224 1.5e-31 140.6 135 57.8
BraA01t02010Z Brassica rapa HOM05D006632 ORTHO05D008224 6.9e-24 115.2 149 46.3
A01p20910 Brassica napus HOM05D006632 ORTHO05D008224 2.6e-23 113.2 149 46.3
AagrBONN_evm.TU.Sc2ySwM_117.1014 Anthoceros agrestis HOM05D006632 ORTHO05D008224 1.9e-21 107.1 152 38.8
Cpa.g.sc276.6 Carica papaya HOM05D006632 ORTHO05D008224 7.4e-18 95.1 122 50.0
FvH4_5g00080 Fragaria vesca HOM05D011292 ORTHO05D013599 2.2e-17 93.6 98 54.1
Duzib068G0053 Durio zibethinus HOM05D006632 ORTHO05D008224 1.1e-16 91.3 54 75.9
Peaxi162Scf00002g00156 Petunia axillaris HOM05D006632 ORTHO05D008224 1.2e-15 87.8 80 55.0
TAR636G0287 Trochodendron aralioides HOM05D006632 ORTHO05D008224 5.9e-15 85.5 98 54.1
DCAR_004944 Daucus carota HOM05D006632 ORTHO05D008224 1.0e-14 84.7 95 52.6
Potri.001G122501 Populus trichocarpa HOM05D006632 ORTHO05D008224 1.1e-10 71.2 85 47.1
Sabra01G0094400 Salix brachista HOM05D006632 ORTHO05D008224 1.3e-09 67.8 48 68.8


User provided reference genes

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