Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.12g053140 Amaranthus hybridus HOM05D003990 ORTHO05D004925 9.9e-195 683.3 359 100.0
Sc01g0010590 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.1e-126 457.2 370 66.5
PGSC0003DMG400005851 Solanum tuberosum HOM05D003990 ORTHO05D004925 7.5e-118 427.9 355 62.5
Solyc08g008530.1 Solanum lycopersicum HOM05D003990 ORTHO05D004925 4.8e-117 425.2 353 63.7
Lsat_1_v5_gn_3_13681 Lactuca sativa HOM05D003990 ORTHO05D004925 1.1e-116 424.1 325 66.5
Sopen08g004380 Solanum pennellii HOM05D003990 ORTHO05D004925 1.4e-116 423.7 329 65.7
Dinv38683 Davidia involucrata HOM05D003990 ORTHO05D001284 9.1e-116 421.0 297 70.7
AUR62019907 Chenopodium quinoa HOM05D003990 ORTHO05D004925 1.1e-113 414.1 246 82.1
MELO3C013779.2 Cucumis melo HOM05D003990 ORTHO05D004925 1.5e-113 413.7 284 71.8
Hma1.2p1_0212F.1_g090230 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 1.5e-113 413.7 288 71.9
Peaxi162Scf00102g01878 Petunia axillaris HOM05D003990 ORTHO05D000951 1.5e-113 413.7 296 69.6
Atru.chr9.1910 Acer truncatum HOM05D003990 ORTHO05D004925 1.9e-113 413.3 348 63.8
CSS0021441 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 2.5e-113 412.9 300 70.3
CsaV3_3G000920 Cucumis sativus L. HOM05D003990 ORTHO05D004925 2.5e-113 412.9 284 71.1
Aqoxy7G00029 Aquilegia oxysepala HOM05D003990 ORTHO05D004925 3.2e-113 412.5 373 62.7
DCAR_009092 Daucus carota HOM05D003990 ORTHO05D004925 3.2e-113 412.5 325 66.2
CSS0010282 Camellia sinensis var. sinensis HOM05D003990 ORTHO05D004925 4.2e-113 412.1 302 70.5
Manes.11G125600 Manihot esculenta HOM05D003990 ORTHO05D004925 4.2e-113 412.1 303 68.0
Oeu022039.1 Olea europaea HOM05D003990 ORTHO05D004925 5.5e-113 411.8 330 63.3
Ciclev10020878m.g Citrus clementina HOM05D003990 ORTHO05D004925 9.4e-113 411.0 314 66.2
CAN.G792.28 Capsicum annuum HOM05D003990 ORTHO05D004925 4.7e-112 408.7 307 66.4
CiPaw.12G078400 Carya illinoinensis HOM05D003990 ORTHO05D004925 4.7e-112 408.7 358 60.1
ECA246G0738 Erigeron canadensis HOM05D003273 ORTHO05D004023 6.1e-112 408.3 282 70.6
Sabra03G0105900 Salix brachista HOM05D003990 ORTHO05D004925 6.1e-112 408.3 365 61.4
EL10Ac5g12450 Beta vulgaris HOM05D003990 ORTHO05D004925 1.4e-111 407.1 249 82.7
Lalb_Chr17g0338551 Lupinus albus HOM05D003990 ORTHO05D004925 1.4e-111 407.1 296 68.6
Rhsim02G0251300 Rhododendron simsii HOM05D003990 ORTHO05D004925 1.4e-111 407.1 345 67.0
MSTRG.13719 Avicennia marina HOM05D003990 ORTHO05D004925 1.8e-111 406.8 332 63.6
Cfa011935 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.8e-111 406.8 285 71.2
Potri.003G145700 Populus trichocarpa HOM05D003990 ORTHO05D004925 1.8e-111 406.8 302 67.5
TAR629G1984 Trochodendron aralioides HOM05D003990 ORTHO05D004925 3.0e-111 406.0 376 60.9
Nitab4.5_0000673g0130 Nicotiana tabacum HOM05D003990 ORTHO05D004925 4.0e-111 405.6 296 69.6
Sed0016376 Sechium edule HOM05D003990 ORTHO05D004925 4.0e-111 405.6 359 59.1
PSO384G4439 Papaver somniferum HOM05D003990 ORTHO05D004925 6.8e-111 404.8 333 64.0
QL02p029212 Quercus lobata HOM05D003990 ORTHO05D004925 6.8e-111 404.8 290 67.9
Carub.0006s2953 Capsella rubella HOM05D003990 ORTHO05D004925 8.8e-111 404.4 362 60.2
FAN13G1570 Fragaria x ananassa HOM05D003990 ORTHO05D004925 8.8e-111 404.4 344 62.2
Nitab4.5_0001962g0040 Nicotiana tabacum HOM05D003990 ORTHO05D004925 8.8e-111 404.4 342 63.7
PSO135G0880 Papaver somniferum HOM05D003990 ORTHO05D004925 1.2e-110 404.1 340 61.5
TWI60G1311 Tripterygium wilfordii HOM05D003990 ORTHO05D004925 1.5e-110 403.7 310 65.8
Cc08_g16660 Coffea canephora HOM05D003990 ORTHO05D004925 4.4e-110 402.1 362 59.7
Gohir.D03G086700 Gossypium hirsutum HOM05D003990 ORTHO05D004925 4.4e-110 402.1 315 63.8
CANSAT21G0847 Cannabis sativa HOM05D003990 ORTHO05D004925 5.7e-110 401.7 344 63.4
Cpa.g.sc175.15 Carica papaya HOM05D003990 ORTHO05D004925 5.7e-110 401.7 282 70.6
Gorai.003G075400 Gossypium raimondii HOM05D003990 ORTHO05D004925 5.7e-110 401.7 315 63.8
AUR62007043 Chenopodium quinoa HOM05D003990 ORTHO05D004925 7.5e-110 401.4 247 80.2
HanXRQChr06g0166861 Helianthus annuus HOM05D003990 ORTHO05D004925 7.5e-110 401.4 346 61.3
AL6G44800 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 9.8e-110 401.0 355 59.2
MD06G1117400 Malus domestica HOM05D003990 ORTHO05D004925 9.8e-110 401.0 336 62.5
Gohir.A02G097800 Gossypium hirsutum HOM05D003990 ORTHO05D004925 1.3e-109 400.6 334 62.0
CDE04G2232 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 3.7e-109 399.1 292 67.8
Thhalv10029450m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 4.8e-109 398.7 330 61.2
Eucgr.D01688 Eucalyptus grandis HOM05D003990 ORTHO05D004925 6.3e-109 398.3 365 59.2
CARHR255860 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.1e-108 397.5 329 62.3
Haze_14077 Corylus avellana HOM05D003990 ORTHO05D004925 1.1e-108 397.5 339 62.2
THA.LOC104813054 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.4e-108 397.1 302 66.2
Lj2g0026928 Lotus japonicus HOM05D003990 ORTHO05D004925 2.4e-108 396.4 365 59.2
RcHm_v2.0_Chr7g0186781 Rosa chinensis HOM05D003990 ORTHO05D004925 3.1e-108 396.0 283 69.6
Sp6g06750 Schrenkiella parvula HOM05D003990 ORTHO05D004925 4.1e-108 395.6 303 66.0
AT4G10750 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 5.4e-108 395.2 363 58.7
A09p28480 Brassica napus HOM05D003990 ORTHO05D004925 7.0e-108 394.8 334 61.4
Prupe.5G128500 Prunus persica HOM05D003990 ORTHO05D004925 1.2e-107 394.0 283 69.6
BcaB01g01511 Brassica carinata HOM05D003990 ORTHO05D004925 2.0e-107 393.3 332 61.1
BraA09t38413Z Brassica rapa HOM05D003990 ORTHO05D004925 4.5e-107 392.1 373 56.8
BcaC04g21069 Brassica carinata HOM05D003990 ORTHO05D004925 1.0e-106 391.0 332 61.4
C09p36050 Brassica napus HOM05D003990 ORTHO05D004925 1.0e-106 391.0 332 61.4
BolC9t56444H Brassica oleracea HOM05D003990 ORTHO05D004925 1.0e-106 391.0 332 61.4
COL.COLO4_10785 Corchorus olitorius HOM05D003990 ORTHO05D004925 1.0e-106 391.0 334 61.7
Medtr1g031790 Medicago truncatula HOM05D003990 ORTHO05D004925 1.3e-106 390.6 341 58.9
Aa31LG9G11320 Aethionema arabicum HOM05D003990 ORTHO05D004925 2.9e-106 389.4 283 68.6
TPR.G36963 Trifolium pratense HOM05D003990 ORTHO05D004925 3.8e-106 389.0 290 64.8
Duzib205G1059 Durio zibethinus HOM05D003990 ORTHO05D004925 5.0e-106 388.7 331 60.7
MBI12_g30966_MAGBIO Magnolia biondii HOM05D003990 ORTHO05D004925 1.1e-105 387.5 336 63.7
Thecc.03G222400 Theobroma cacao HOM05D003990 ORTHO05D004925 1.9e-105 386.7 339 59.9
Lj8A201T86 Lonicera japonica HOM05D003990 ORTHO05D004925 2.5e-105 386.3 265 73.2
VMungo1215G2928 Vigna mungo HOM05D003990 ORTHO05D004925 1.2e-104 384.0 336 60.4
Oeu022040.1 Olea europaea HOM05D003990 ORTHO05D004925 9.2e-100 367.9 263 67.7
CiPaw.11G113600 Carya illinoinensis HOM05D003990 ORTHO05D004925 4.5e-99 365.5 260 70.4
HPP92_008886 Vanilla planifolia HOM05D003990 ORTHO05D004925 4.5e-99 365.5 354 55.9
Zm00001eb103220 Zea mays HOM05D003990 ORTHO05D004925 4.5e-99 365.5 347 56.5
Phvul.003G021600 Phaseolus vulgaris HOM05D003990 ORTHO05D004925 5.9e-99 365.2 334 57.8
Os09g0529900 Oryza sativa ssp. japonica HOM05D003990 ORTHO05D004925 1.0e-98 364.4 317 61.8
Duzib084G0313 Durio zibethinus HOM05D003990 ORTHO05D004925 2.3e-98 363.2 260 66.2
Nn1g00366 Nelumbo nucifera HOM05D003990 ORTHO05D004925 2.9e-98 362.8 361 55.7
Cfa011937 Carpinus fangiana HOM05D003990 ORTHO05D004925 7.3e-97 358.2 298 62.8
Ah.12g053130 Amaranthus hybridus HOM05D003990 ORTHO05D004925 2.8e-96 356.3 268 65.3
AUR62019906 Chenopodium quinoa HOM05D003990 ORTHO05D004925 3.6e-96 355.9 268 63.8
ATR0620G013 Amborella trichopoda HOM05D003990 ORTHO05D004925 4.7e-96 355.5 336 57.1
FvH4_5g11021 Fragaria vesca HOM05D003990 ORTHO05D004925 1.4e-95 354.0 283 64.3
QL02p029171 Quercus lobata HOM05D003990 ORTHO05D004925 1.4e-95 354.0 269 65.1
AUR62007042 Chenopodium quinoa HOM05D003990 ORTHO05D004925 2.0e-94 350.1 268 63.4
EL10Ac5g12452 Beta vulgaris HOM05D003990 ORTHO05D004925 8.3e-93 344.7 297 58.9
Sc01g0010580 Simmondsia chinensis HOM05D003990 ORTHO05D004925 1.6e-91 340.5 270 62.6
COL.COLO4_10784 Corchorus olitorius HOM05D003990 ORTHO05D004925 3.5e-91 339.3 260 63.5
QL02p029158 Quercus lobata HOM05D003990 ORTHO05D004925 8.6e-90 334.7 270 61.9
vmacro11510 Vaccinium macrocarpon HOM05D003990 ORTHO05D004925 2.5e-89 333.2 359 57.4
Psat6g044760 Pisum sativum HOM05D003990 ORTHO05D004925 3.1e-87 326.2 244 68.0
SEGI_30656 Sequoiadendron giganteum HOM05D003990 ORTHO05D004925 5.8e-86 322.0 300 56.3
Ca_12579_v3 Cicer arietinum L. HOM05D003990 ORTHO05D004925 1.7e-85 320.5 243 63.0
THA.LOC104815209 Tarenaya hassleriana HOM05D003990 ORTHO05D004925 1.4e-84 317.4 266 57.5
A01p15340 Brassica napus HOM05D003990 ORTHO05D004925 2.3e-82 310.1 269 55.8
BolC1t01855H Brassica oleracea HOM05D003990 ORTHO05D004925 2.3e-82 310.1 269 55.8
COL.COLO4_10783 Corchorus olitorius HOM05D003990 ORTHO05D004925 2.3e-82 310.1 235 65.1
Thhalv10026820m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 6.6e-82 308.5 277 55.2
arahy.Tifrunner.gnm1.ann1.LQZ0GD Arachis hypogaea HOM05D003990 ORTHO05D004925 1.5e-81 307.4 259 56.4
arahy.Tifrunner.gnm1.ann1.ZCAA4H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.5e-81 307.4 259 56.4
Aa31LG6G7280 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.6e-80 303.9 257 56.0
C01p19290 Brassica napus HOM05D003990 ORTHO05D004925 3.6e-80 302.8 269 55.0
BcaNung01112 Brassica carinata HOM05D003990 ORTHO05D004925 4.4e-78 295.8 268 51.9
BraA01t01479Z Brassica rapa HOM05D003990 ORTHO05D004925 1.3e-77 294.3 271 52.0
AL7G29210 Arabidopsis lyrata HOM05D003990 ORTHO05D004925 2.9e-77 293.1 257 54.1
BolC1t01856H Brassica oleracea HOM05D003990 ORTHO05D004925 2.9e-77 293.1 304 48.4
BcaC09g50914 Brassica carinata HOM05D003990 ORTHO05D004925 4.9e-77 292.4 273 51.3
Migut.O00797 Erythranthe guttata HOM05D003990 ORTHO05D004925 4.9e-77 292.4 257 63.0
A01p15350 Brassica napus HOM05D003990 ORTHO05D004925 1.4e-76 290.8 271 51.7
arahy.Tifrunner.gnm1.ann1.IT3SMZ Arachis hypogaea HOM05D003990 ORTHO05D004925 2.4e-76 290.0 270 53.0
arahy.Tifrunner.gnm1.ann1.Y0R09G Arachis hypogaea HOM05D003990 ORTHO05D004925 2.4e-76 290.0 270 53.0
Pp3c17_4700 Physcomitrium patens HOM05D003990 ORTHO05D004925 3.2e-76 289.7 278 53.6
C01p19300 Brassica napus HOM05D003990 ORTHO05D004925 5.4e-76 288.9 273 50.9
arahy.Tifrunner.gnm1.ann1.3SR05H Arachis hypogaea HOM05D003990 ORTHO05D004925 1.6e-75 287.3 259 53.3
arahy.Tifrunner.gnm1.ann1.UPJ447 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.6e-75 287.3 259 53.3
Carub.0007s1702 Capsella rubella HOM05D003990 ORTHO05D004925 2.1e-75 287.0 259 52.9
AagrBONN_evm.TU.Sc2ySwM_117.985 Anthoceros agrestis HOM05D003990 ORTHO05D004925 3.0e-74 283.1 254 56.3
Mapoly0141s0022 Marchantia polymorpha HOM05D003990 ORTHO05D004925 3.0e-74 283.1 272 54.8
BraA01t01478Z Brassica rapa HOM05D003990 ORTHO05D004925 1.9e-73 280.4 269 53.2
BcaC09g50915 Brassica carinata HOM05D003990 ORTHO05D004925 7.3e-73 278.5 234 56.4
CARHR006280 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.6e-72 277.3 233 57.1
Sc16g0011220 Simmondsia chinensis HOM05D003990 ORTHO05D004925 4.0e-71 272.7 245 55.5
arahy.Tifrunner.gnm1.ann1.UE00R2 Arachis hypogaea HOM05D003990 ORTHO05D004925 5.8e-70 268.9 268 51.5
Thhalv10027122m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 2.4e-68 263.5 258 51.2
Haze_09152 Corylus avellana HOM05D003990 ORTHO05D004925 1.0e-66 258.1 197 64.0
Glyma.07G166800 Glycine max HOM05D003990 ORTHO05D004925 3.9e-66 256.1 169 74.6
Zm00001eb207470 Zea mays HOM05D003990 ORTHO05D004925 4.3e-65 252.7 235 57.9
arahy.Tifrunner.gnm1.ann1.VJUY72 Arachis hypogaea HOM05D003990 ORTHO05D004925 2.1e-64 250.4 265 47.9
arahy.Tifrunner.gnm1.ann1.E0UK9T Arachis hypogaea HOM05D003990 ORTHO05D004925 2.8e-64 250.0 265 47.9
CARHR006270 Cardamine hirsuta HOM05D003990 ORTHO05D004925 2.8e-64 250.0 232 52.2
Thecc.03G222500 Theobroma cacao HOM05D003990 ORTHO05D004925 1.8e-63 247.3 172 68.0
unitig_52.g17196 Utricularia gibba HOM05D003990 ORTHO05D004925 3.8e-61 239.6 195 61.5
CDE07G1159 Ceratophyllum demersum HOM05D003990 ORTHO05D004925 2.4e-60 236.9 336 44.3
arahy.Tifrunner.gnm1.ann1.QV8INP Arachis hypogaea HOM05D003990 ORTHO05D004925 1.1e-55 221.5 271 44.6
QL02p029191 Quercus lobata HOM05D003990 ORTHO05D004925 7.6e-54 215.3 408 36.5
CARHR231480 Cardamine hirsuta HOM05D003990 ORTHO05D004925 1.8e-50 204.1 182 52.2
Sp7g22040 Schrenkiella parvula HOM05D003990 ORTHO05D004925 2.5e-49 200.3 204 50.5
Potri.001G084900 Populus trichocarpa HOM05D003990 ORTHO05D004925 2.4e-47 193.7 144 64.6
Zm00001eb366680 Zea mays HOM05D003990 ORTHO05D004925 1.2e-46 191.4 235 50.2
Aa31LG6G7290 Aethionema arabicum HOM05D003990 ORTHO05D004925 1.0e-45 188.3 146 61.6
AT4G24080 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 5.1e-42 176.0 169 49.1
FAN18G2679 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.8e-39 167.5 141 60.3
PRCOL_00003301 Prasinoderma coloniale HOM05D003990 ORTHO05D004925 2.0e-38 164.1 240 38.8
CAN.G479.14 Capsicum annuum HOM05D003990 ORTHO05D004925 4.3e-33 146.4 118 65.3
Hma1.2p1_0440F.1_g153760 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 7.4e-33 145.6 201 43.3
AagrBONN_evm.TU.Sc2ySwM_228.2729 Anthoceros agrestis HOM05D003990 ORTHO05D004925 4.8e-32 142.9 201 42.3
Zm00001eb314200 Zea mays HOM05D003990 ORTHO05D004925 8.8e-26 122.1 245 33.1
FAN18G2309 Fragaria x ananassa HOM05D003990 ORTHO05D004925 1.1e-23 115.2 68 82.4
Haze_16436 Corylus avellana HOM05D003990 ORTHO05D004925 1.4e-23 114.8 199 39.2
Cre01.g015550 Chlamydomonas reinhardtii HOM05D003990 ORTHO05D004925 1.3e-21 108.2 181 35.9
Thhalv10027505m.g Eutrema salsugineum HOM05D003990 ORTHO05D004925 1.3e-21 108.2 113 44.2
Duzib068G0872 Durio zibethinus HOM05D003990 ORTHO05D004925 1.1e-20 105.1 93 57.0
Cfa021766 Carpinus fangiana HOM05D003990 ORTHO05D004925 1.4e-20 104.8 209 31.6
arahy.Tifrunner.gnm1.ann1.R8SYM2 Arachis hypogaea HOM05D003990 ORTHO05D004925 1.2e-19 101.7 137 43.8
arahy.Tifrunner.gnm1.ann1.S5BUNY Arachis hypogaea HOM05D003990 ORTHO05D004925 1.1e-17 95.1 65 70.8
Migut.E00635 Erythranthe guttata HOM05D003990 ORTHO05D004925 2.2e-16 90.9 92 55.4
arahy.Tifrunner.gnm1.ann1.228U7D Arachis hypogaea HOM05D003990 ORTHO05D004925 2.6e-14 84.0 68 61.8
unitig_52.g17197 Utricularia gibba HOM05D003990 ORTHO05D004925 3.5e-14 83.6 88 54.5
EL10Ac6g14266 Beta vulgaris HOM05D003990 ORTHO05D004925 2.2e-13 80.9 68 55.9
Prupe.2G052300 Prunus persica HOM05D003990 ORTHO05D004925 5.0e-13 79.7 66 57.6
Hma1.2p1_0212F.1_g090250 Hydrangea macrophylla HOM05D003990 ORTHO05D004925 2.5e-12 77.4 57 61.4
QL02p029165 Quercus lobata HOM05D003990 ORTHO05D010865 1.8e-10 71.2 58 63.8
AagrBONN_evm.TU.Sc2ySwM_344.3329 Anthoceros agrestis HOM05D003990 ORTHO05D071624 5.2e-10 69.7 278 26.3
QL02p029160 Quercus lobata HOM05D003990 ORTHO05D004925 3.3e-09 67.0 67 50.7
VMungo0647G2082 Vigna mungo HOM05D003990 ORTHO05D004925 1.3e-08 65.1 67 47.8
AT4G24070 Arabidopsis thaliana HOM05D003990 ORTHO05D004925 1.7e-08 64.7 66 50.0


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