Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g051560 Amaranthus hybridus HOM05D002152 ORTHO05D060830 8.4e-38 159.8 80 100.0
Ah.02g110510 Amaranthus hybridus HOM05D002152 ORTHO05D002737 1.2e-07 59.7 148 34.5
EL10Ac5g10740 Beta vulgaris HOM05D002152 ORTHO05D002737 5.9e-07 57.4 32 87.5
AUR62008203 Chenopodium quinoa HOM05D002152 ORTHO05D002737 5.9e-07 57.4 32 87.5
AUR62030956 Chenopodium quinoa HOM05D002152 ORTHO05D002737 5.9e-07 57.4 32 87.5
Hund02746 Selenicereus undatus HOM05D002152 ORTHO05D002737 1.3e-06 56.2 32 84.4
Cfa019139 Carpinus fangiana HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Ca_16172_v3 Cicer arietinum L. HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Ciclev10018751m.g Citrus clementina HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Cc04_g14190 Coffea canephora HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Glyma.06G182100 Glycine max HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Glyma.13G146900 Glycine max HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Lj1g0023141 Lotus japonicus HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Lalb_Chr08g0236531 Lupinus albus HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Lalb_Chr11g0071371 Lupinus albus HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Manes.06G105400 Manihot esculenta HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Medtr3g077740 Medicago truncatula HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Psat5g114960 Pisum sativum HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Potri.012G081600 Populus trichocarpa HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Potri.015G077300 Populus trichocarpa HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
QL10p011489 Quercus lobata HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Sabra12G0058400 Salix brachista HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
TPR.G25314 Trifolium pratense HOM05D002152 ORTHO05D002737 2.2e-06 55.5 32 84.4
Dinv20647 Davidia involucrata HOM05D002152 ORTHO05D002737 2.9e-06 55.1 32 84.4
unitig_26.g9621 Utricularia gibba HOM05D002152 ORTHO05D002737 2.9e-06 55.1 33 78.8
GSVIVG01007735001 Vitis vinifera HOM05D002152 ORTHO05D002737 2.9e-06 55.1 32 81.2
Atru.chr9.2484 Acer truncatum HOM05D002152 ORTHO05D002737 3.8e-06 54.7 32 81.2
Sed0016918 Sechium edule HOM05D002152 ORTHO05D002737 3.8e-06 54.7 32 81.2
CSS0031123 Camellia sinensis var. sinensis HOM05D002152 ORTHO05D002737 5.0e-06 54.3 32 81.2
Sabra15G0102000 Salix brachista HOM05D002152 ORTHO05D002737 5.0e-06 54.3 32 81.2
Sed0020413 Sechium edule HOM05D002152 ORTHO05D002737 5.0e-06 54.3 32 78.1
Sc12g0005300 Simmondsia chinensis HOM05D002152 ORTHO05D002737 5.0e-06 54.3 32 81.2
Cpa.g.sc76.43 Carica papaya HOM05D002152 ORTHO05D002737 6.5e-06 53.9 32 81.2
CiPaw.12G026800 Carya illinoinensis HOM05D002152 ORTHO05D002737 6.5e-06 53.9 32 81.2
Rhsim12G0164700 Rhododendron simsii HOM05D002152 ORTHO05D002737 6.5e-06 53.9 32 81.2
Hund09441 Selenicereus undatus HOM05D002152 ORTHO05D002737 6.5e-06 53.9 32 81.2
THA.LOC104809842 Tarenaya hassleriana HOM05D002152 ORTHO05D002737 6.5e-06 53.9 32 81.2
TWI39G0669 Tripterygium wilfordii HOM05D002152 ORTHO05D002737 6.5e-06 53.9 32 81.2
arahy.Tifrunner.gnm1.ann1.00L7NP Arachis hypogaea HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 81.2
arahy.Tifrunner.gnm1.ann1.H1QDLV Arachis hypogaea HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 81.2
Duzib205G1519 Durio zibethinus HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 81.2
Gohir.D11G000700 Gossypium hirsutum HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 81.2
Gorai.007G001600 Gossypium raimondii HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 81.2
Phvul.009G178200 Phaseolus vulgaris HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 78.1
VMungo1309G0042 Vigna mungo HOM05D002152 ORTHO05D002737 8.5e-06 53.5 32 78.1


User provided reference genes

Program Settings