Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g051100 Amaranthus hybridus HOM05D006769 ORTHO05D008522 2.2e-213 745.3 366 100.0
AUR62008129 Chenopodium quinoa HOM05D006769 ORTHO05D008522 4.0e-167 591.7 367 81.2
AUR62028711 Chenopodium quinoa HOM05D006769 ORTHO05D008522 9.8e-166 587.0 367 80.9
EL10Ac5g10636 Beta vulgaris HOM05D006769 ORTHO05D008522 4.0e-159 565.1 367 77.9
Hund02792 Selenicereus undatus HOM05D006769 ORTHO05D008522 5.8e-150 534.6 368 73.4
Sc05g0001770 Simmondsia chinensis HOM05D006769 ORTHO05D008522 5.1e-130 468.4 369 66.4
Prupe.8G191400 Prunus persica HOM05D006769 ORTHO05D008522 5.8e-118 428.3 368 62.5
PSO170G1917 Papaver somniferum HOM05D006769 ORTHO05D008522 1.1e-116 424.1 371 60.6
FvH4_2g17880 Fragaria vesca HOM05D006769 ORTHO05D008522 1.9e-116 423.3 371 61.2
FAN15G1712 Fragaria x ananassa HOM05D006769 ORTHO05D008522 2.7e-115 419.5 371 60.6
MD05G1163100 Malus domestica HOM05D006769 ORTHO05D008522 7.9e-115 417.9 374 61.0
FAN24G2350 Fragaria x ananassa HOM05D006769 ORTHO05D008522 1.0e-114 417.5 371 60.6
ECA248G0008 Erigeron canadensis HOM05D006769 ORTHO05D008522 2.1e-112 409.8 368 59.5
Hma1.2p1_0161F.1_g071350 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 3.7e-112 409.1 389 56.8
Cfa010337 Carpinus fangiana HOM05D006769 ORTHO05D008522 5.3e-111 405.2 369 58.8
GSVIVG01006251001 Vitis vinifera HOM05D006769 ORTHO05D008522 2.0e-110 403.3 402 55.0
Nn1g08265 Nelumbo nucifera HOM05D006769 ORTHO05D008522 2.6e-110 402.9 372 59.7
CiPaw.13G054700 Carya illinoinensis HOM05D006769 ORTHO05D008522 7.6e-110 401.4 369 58.8
FAN27G3257 Fragaria x ananassa HOM05D006769 ORTHO05D008522 7.6e-110 401.4 346 60.4
QL09p046131 Quercus lobata HOM05D006769 ORTHO05D008522 7.6e-110 401.4 445 52.4
Manes.12G053000 Manihot esculenta HOM05D006769 ORTHO05D008522 1.7e-109 400.2 373 59.0
Thecc.01G211800 Theobroma cacao HOM05D006769 ORTHO05D008522 1.7e-109 400.2 366 56.6
Potri.002G250400 Populus trichocarpa HOM05D006769 ORTHO05D008522 3.8e-109 399.1 380 56.8
Medtr7g052250 Medicago truncatula HOM05D006769 ORTHO05D008522 7.1e-108 394.8 368 58.4
Gohir.D07G166800 Gossypium hirsutum HOM05D006769 ORTHO05D008522 9.3e-108 394.4 368 55.7
Phvul.008G137400 Phaseolus vulgaris HOM05D006769 ORTHO05D008522 9.3e-108 394.4 371 58.2
Ca_07395_v3 Cicer arietinum L. HOM05D006769 ORTHO05D008522 1.6e-107 393.7 375 58.1
Dinv12798 Davidia involucrata HOM05D006769 ORTHO05D008522 1.6e-107 393.7 409 55.3
Aqoxy5G00037 Aquilegia oxysepala HOM05D006769 ORTHO05D008522 7.9e-107 391.3 382 56.5
HanXRQChr01g0007211 Helianthus annuus HOM05D006769 ORTHO05D008522 1.0e-106 391.0 369 58.3
Gorai.N003700 Gossypium raimondii HOM05D006769 ORTHO05D008522 1.3e-106 390.6 374 55.3
DCAR_004766 Daucus carota HOM05D006769 ORTHO05D008522 2.3e-106 389.8 373 55.5
Lj1g0001413 Lotus japonicus HOM05D006769 ORTHO05D008522 2.3e-106 389.8 367 56.1
Lalb_Chr03g0041161 Lupinus albus HOM05D006769 ORTHO05D008522 3.0e-106 389.4 369 59.1
Actinidia30020 Actinidia chinensis HOM05D006769 ORTHO05D008522 8.7e-106 387.9 309 65.0
Glyma.08G344800 Glycine max HOM05D006769 ORTHO05D008522 1.9e-105 386.7 384 55.7
Psat3g151240 Pisum sativum HOM05D006769 ORTHO05D008522 1.6e-104 383.6 374 56.7
CANSAT01G2880 Cannabis sativa HOM05D006769 ORTHO05D008522 2.1e-104 383.3 370 56.2
Duzib138G0404 Durio zibethinus HOM05D006769 ORTHO05D008522 2.1e-104 383.3 357 56.9
TPR.G26832 Trifolium pratense HOM05D006769 ORTHO05D008522 1.8e-103 380.2 370 57.8
TAR365G1082 Trochodendron aralioides HOM05D006769 ORTHO05D008522 2.4e-103 379.8 369 55.8
arahy.Tifrunner.gnm1.ann1.ADK8RR Arachis hypogaea HOM05D006769 ORTHO05D008522 4.1e-103 379.0 369 56.6
arahy.Tifrunner.gnm1.ann1.N7FX8W Arachis hypogaea HOM05D006769 ORTHO05D008522 2.0e-102 376.7 369 56.4
Eucgr.K02091 Eucalyptus grandis HOM05D006769 ORTHO05D008522 4.5e-102 375.6 263 69.6
Lj2A1118G65 Lonicera japonica HOM05D006769 ORTHO05D008522 4.5e-102 375.6 449 48.1
PGR044G2601 Punica granatum HOM05D006769 ORTHO05D008522 5.9e-102 375.2 387 55.3
RcHm_v2.0_Chr6g0283131 Rosa chinensis HOM05D006769 ORTHO05D008522 7.6e-102 374.8 281 65.5
TWI18G0992 Tripterygium wilfordii HOM05D006769 ORTHO05D008522 7.6e-102 374.8 261 69.0
Atru.chr6.1512 Acer truncatum HOM05D006769 ORTHO05D008522 8.5e-101 371.3 404 52.2
MSTRG.12754 Avicennia marina HOM05D006769 ORTHO05D008522 1.9e-100 370.2 396 51.3
Cc01_g16210 Coffea canephora HOM05D006769 ORTHO05D008522 1.9e-100 370.2 363 54.8
CAN.G188.2 Capsicum annuum HOM05D006769 ORTHO05D008522 5.5e-100 368.6 419 50.1
AT2G26470 Arabidopsis thaliana HOM05D006769 ORTHO05D008522 1.6e-99 367.1 362 54.1
THA.LOC104819455 Tarenaya hassleriana HOM05D006769 ORTHO05D008522 1.6e-99 367.1 289 63.3
Oeu003634.1 Olea europaea HOM05D006769 ORTHO05D008522 2.7e-99 366.3 445 47.6
SHI10304 Sapria himalayana HOM05D006769 ORTHO05D008522 2.7e-99 366.3 250 69.6
ClCG09G008260 Citrullus lanatus HOM05D006769 ORTHO05D008522 3.6e-99 365.9 372 53.8
CsaV3_7G026790 Cucumis sativus L. HOM05D006769 ORTHO05D008522 1.3e-98 364.0 369 52.8
Migut.N00662 Erythranthe guttata HOM05D006769 ORTHO05D008522 1.3e-98 364.0 387 51.9
AL4G19290 Arabidopsis lyrata HOM05D006769 ORTHO05D008522 3.9e-98 362.5 357 53.2
Aa31LG5G9400 Aethionema arabicum HOM05D006769 ORTHO05D008522 1.3e-96 357.5 316 57.6
CARHR294500 Cardamine hirsuta HOM05D006769 ORTHO05D008522 1.6e-96 357.1 285 62.5
Carub.0004s0653 Capsella rubella HOM05D006769 ORTHO05D008522 2.2e-96 356.7 362 53.9
BcaB08g35324 Brassica carinata HOM05D006769 ORTHO05D008522 4.8e-96 355.5 299 60.5
Sp6g10380 Schrenkiella parvula HOM05D006769 ORTHO05D008522 4.8e-96 355.5 354 53.4
BcaC07g40819 Brassica carinata HOM05D006769 ORTHO05D008522 1.8e-95 353.6 316 57.0
C08p38120 Brassica napus HOM05D006769 ORTHO05D008522 1.8e-95 353.6 316 57.0
Rhsim13G0052300 Rhododendron simsii HOM05D006769 ORTHO05D008522 4.1e-95 352.4 355 55.2
Thhalv10003450m.g Eutrema salsugineum HOM05D006769 ORTHO05D008522 1.2e-94 350.9 319 57.4
Carub.0004s0639 Capsella rubella HOM05D006769 ORTHO05D008522 2.6e-94 349.7 310 57.4
Nitab4.5_0008509g0020 Nicotiana tabacum HOM05D006769 ORTHO05D008522 3.4e-94 349.4 386 50.8
A09p55190 Brassica napus HOM05D006769 ORTHO05D008522 1.3e-93 347.4 372 52.7
BraA09t40927Z Brassica rapa HOM05D006769 ORTHO05D008522 1.3e-93 347.4 372 52.7
BolC8t51387H Brassica oleracea HOM05D006769 ORTHO05D008522 3.8e-93 345.9 383 51.4
SalBow3G4668 Salvia bowleyana HOM05D006769 ORTHO05D008522 5.7e-89 332.0 383 50.4
ATR0609G088 Amborella trichopoda HOM05D006769 ORTHO05D008522 2.8e-88 329.7 391 49.9
unitig_37.g12548 Utricularia gibba HOM05D006769 ORTHO05D008522 1.1e-87 327.8 378 47.9
Lsat_1_v5_gn_5_178440 Lactuca sativa HOM05D006769 ORTHO05D008522 3.4e-86 322.8 367 51.5
SEGI_34173 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 1.9e-84 317.0 386 46.1
vmacro21305 Vaccinium macrocarpon HOM05D006769 ORTHO05D008522 5.5e-84 315.5 392 47.2
SMO241G0010 Selaginella moellendorffii HOM05D006769 ORTHO05D008522 6.1e-83 312.0 252 58.7
HanXRQChr01g0007221 Helianthus annuus HOM05D006769 ORTHO05D008522 8.2e-80 301.6 423 45.4
AagrBONN_evm.TU.Sc2ySwM_344.907 Anthoceros agrestis HOM05D006769 ORTHO05D008522 6.5e-77 292.0 383 44.4
HPP92_009961 Vanilla planifolia HOM05D006769 ORTHO05D008522 6.1e-75 285.4 379 46.7
Gohir.A07G159600 Gossypium hirsutum HOM05D006769 ORTHO05D008522 1.0e-74 284.6 283 55.8
VMungo1383G2812 Vigna mungo HOM05D006769 ORTHO05D008522 7.5e-73 278.5 286 56.6
Cpa.g.sc8.80 Carica papaya HOM05D006769 ORTHO05D008522 8.2e-72 275.0 208 69.2
CSS0037741 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 2.0e-70 270.4 173 73.4
Zm00001eb090430 Zea mays HOM05D006769 ORTHO05D008522 4.5e-70 269.2 258 54.3
Peaxi162Scf00335g01510 Petunia axillaris HOM05D006769 ORTHO05D008522 7.7e-70 268.5 182 70.3
Pp3c12_23250 Physcomitrium patens HOM05D006769 ORTHO05D008522 2.1e-67 260.4 318 45.0
Ciclev10032230m.g Citrus clementina HOM05D006769 ORTHO05D008522 5.9e-62 242.3 289 50.5
Haze_03306 Corylus avellana HOM05D006769 ORTHO05D008522 9.5e-60 235.0 255 53.3
Hma1.2p1_0161F.1_g071340 Hydrangea macrophylla HOM05D006769 ORTHO05D008522 1.4e-58 231.1 281 49.5
CBR_g20401 Chara braunii HOM05D006769 ORTHO05D008522 5.9e-54 215.7 257 48.2
Os06g0470800 Oryza sativa ssp. japonica HOM05D006769 ORTHO05D008522 2.3e-53 213.8 178 59.6
MCO07G255 Micromonas commoda HOM05D006769 ORTHO05D008522 7.3e-52 208.8 256 41.8
SEGI_18025 Sequoiadendron giganteum HOM05D006769 ORTHO05D008522 7.3e-52 208.8 152 64.5
Sed0011761 Sechium edule HOM05D006769 ORTHO05D008522 1.5e-49 201.1 262 46.2
Mapoly0021s0139 Marchantia polymorpha HOM05D006769 ORTHO05D008522 7.5e-49 198.7 194 51.0
Nitab4.5_0000038g0100 Nicotiana tabacum HOM05D006769 ORTHO05D008522 2.9e-48 196.8 359 39.6
CDE09G0834 Ceratophyllum demersum HOM05D006769 ORTHO05D008522 2.4e-47 193.7 351 37.3
Haze_03305 Corylus avellana HOM05D006769 ORTHO05D008522 5.2e-42 176.0 123 68.3
QL09p046008 Quercus lobata HOM05D006769 ORTHO05D008522 2.3e-37 160.6 91 84.6
PRCOL_00005345 Prasinoderma coloniale HOM05D006769 ORTHO05D008522 5.4e-31 139.4 328 32.0
VMungo1383G3069 Vigna mungo HOM05D006769 ORTHO05D008522 8.6e-29 132.1 88 67.0
CSS0014368 Camellia sinensis var. sinensis HOM05D006769 ORTHO05D008522 9.5e-28 128.6 226 41.2
RcHm_v2.0_Chr6g0283021 Rosa chinensis HOM05D006769 ORTHO05D008522 3.6e-27 126.7 120 55.8
Cfa021866 Carpinus fangiana HOM05D006769 ORTHO05D008522 6.8e-26 122.5 399 30.6
Cpa.g.sc8.79 Carica papaya HOM05D006769 ORTHO05D008522 4.4e-25 119.8 85 63.5
Cre09.g410000 Chlamydomonas reinhardtii HOM05D006769 ORTHO05D008522 1.3e-24 118.2 134 45.5
CDE02G1388 Ceratophyllum demersum HOM05D007934 ORTHO05D010067 1.4e-23 114.8 85 56.5
MD10G1152700 Malus domestica HOM05D006769 ORTHO05D008522 3.6e-19 100.1 145 43.4
SGA_v2.0_scaffold77G25292 Striga asiatica HOM05D006769 ORTHO05D008522 8.1e-19 99.0 226 33.6
AUR62008093 Chenopodium quinoa HOM05D006769 ORTHO05D008522 2.9e-16 90.5 166 42.8
Prupe.6G190400 Prunus persica HOM05D006769 ORTHO05D008522 3.4e-09 67.0 47 59.6
Prupe.2G270900 Prunus persica HOM05D006769 ORTHO05D008522 5.8e-09 66.2 57 52.6


User provided reference genes

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