Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g051090 Amaranthus hybridus HOM05D007255 ORTHO05D009052 2.4e-136 488.8 239 100.0
EL10Ac5g10635 Beta vulgaris HOM05D007255 ORTHO05D009052 3.9e-107 391.7 239 81.6
AUR62028710 Chenopodium quinoa HOM05D007255 ORTHO05D009052 8.0e-100 367.5 259 72.6
Hund02793 Selenicereus undatus HOM05D007255 ORTHO05D009052 1.3e-94 350.1 239 74.1
Sc05g0001760 Simmondsia chinensis HOM05D007255 ORTHO05D009052 1.1e-85 320.5 244 67.6
Dinv10428 Davidia involucrata HOM05D007255 ORTHO05D009052 3.4e-82 308.9 241 65.1
CiPaw.13G054800 Carya illinoinensis HOM05D007255 ORTHO05D009052 1.0e-78 297.4 241 63.1
Hma1.2p1_0161F.1_g071360 Hydrangea macrophylla HOM05D007255 ORTHO05D009052 1.7e-78 296.6 241 65.1
SalBow6G0858 Salvia bowleyana HOM05D007255 ORTHO05D009052 3.8e-78 295.4 246 63.4
QL09p046138 Quercus lobata HOM05D007255 ORTHO05D009052 1.1e-77 293.9 240 63.3
Nitab4.5_0000038g0080 Nicotiana tabacum HOM05D007255 ORTHO05D009052 1.9e-77 293.1 242 63.2
Eucgr.K02090 Eucalyptus grandis HOM05D007255 ORTHO05D009052 2.5e-77 292.7 204 69.6
Thecc.01G211700 Theobroma cacao HOM05D007255 ORTHO05D009052 2.5e-77 292.7 236 63.1
Prupe.8G191100 Prunus persica HOM05D007255 ORTHO05D009052 3.3e-77 292.4 240 62.5
TAR365G1235 Trochodendron aralioides HOM05D007255 ORTHO05D009052 3.3e-77 292.4 243 64.2
Cc01_g16200 Coffea canephora HOM05D007255 ORTHO05D009052 7.3e-77 291.2 243 63.4
Nitab4.5_0005972g0030 Nicotiana tabacum HOM05D007255 ORTHO05D009052 9.5e-77 290.8 242 62.4
MSTRG.18490 Avicennia marina HOM05D007255 ORTHO05D009052 2.1e-76 289.7 240 65.0
AT3G07440 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 2.8e-76 289.3 213 68.1
Cpa.g.sc8.78 Carica papaya HOM05D007255 ORTHO05D009052 2.8e-76 289.3 211 67.8
Carub.0003s0699 Capsella rubella HOM05D007255 ORTHO05D009052 8.0e-76 287.7 213 67.1
AL3G18750 Arabidopsis lyrata HOM05D007255 ORTHO05D009052 1.0e-75 287.3 213 67.1
RcHm_v2.0_Chr6g0282891 Rosa chinensis HOM05D007255 ORTHO05D009052 1.0e-75 287.3 239 63.2
Potri.002G250500 Populus trichocarpa HOM05D007255 ORTHO05D009052 1.4e-75 287.0 240 62.9
SGA_v2.0_scaffold29G12102 Striga asiatica HOM05D007255 ORTHO05D009052 1.4e-75 287.0 223 64.6
FAN15G3515 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.8e-75 286.6 239 63.2
FAN27G1291 Fragaria x ananassa HOM05D007255 ORTHO05D009052 1.8e-75 286.6 239 63.2
FvH4_2g17870 Fragaria vesca HOM05D007255 ORTHO05D009052 2.3e-75 286.2 239 63.6
COL.COLO4_28926 Corchorus olitorius HOM05D007255 ORTHO05D009052 3.0e-75 285.8 241 61.8
FAN24G0557 Fragaria x ananassa HOM05D007255 ORTHO05D009052 4.0e-75 285.4 244 61.9
Manes.13G054000 Manihot esculenta HOM05D007255 ORTHO05D009052 5.2e-75 285.0 230 63.0
PGR044G0433 Punica granatum HOM05D007255 ORTHO05D009052 6.8e-75 284.6 205 69.3
TWI18G1029 Tripterygium wilfordii HOM05D007255 ORTHO05D009052 8.9e-75 284.3 225 64.9
Ciclev10016497m.g Citrus clementina HOM05D007255 ORTHO05D009052 1.2e-74 283.9 237 64.1
Aa31LG5G18020 Aethionema arabicum HOM05D007255 ORTHO05D009052 2.0e-74 283.1 214 67.8
Ca_23187_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.0e-74 283.1 238 61.8
Ca_30803_v3 Cicer arietinum L. HOM05D007255 ORTHO05D009052 2.0e-74 283.1 238 61.8
Oeu064665.2 Olea europaea HOM05D007255 ORTHO05D009052 2.6e-74 282.7 260 58.8
Rhsim01G0248900 Rhododendron simsii HOM05D007255 ORTHO05D009052 2.6e-74 282.7 244 63.1
Sabra02G0190600 Salix brachista HOM05D007255 ORTHO05D009052 3.4e-74 282.3 240 62.9
Aqoxy5G00040 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 1.3e-73 280.4 232 61.2
CARHR082090 Cardamine hirsuta HOM05D007255 ORTHO05D009052 1.3e-73 280.4 214 66.4
Lalb_Chr12g0210041 Lupinus albus HOM05D007255 ORTHO05D009052 1.3e-73 280.4 202 68.3
CANSAT01G0773 Cannabis sativa HOM05D007255 ORTHO05D009052 1.7e-73 280.0 238 60.9
Duzib211G0668 Durio zibethinus HOM05D007255 ORTHO05D009052 1.7e-73 280.0 236 61.0
Migut.D00726 Erythranthe guttata HOM05D007255 ORTHO05D009052 8.3e-73 277.7 245 61.2
Glyma.03G089600 Glycine max HOM05D007255 ORTHO05D009052 8.3e-73 277.7 238 61.8
Solyc09g058990.3 Solanum lycopersicum HOM05D007255 ORTHO05D009052 1.1e-72 277.3 241 60.6
BraA06t26826Z Brassica rapa HOM05D007255 ORTHO05D009052 1.8e-72 276.6 212 66.5
Gorai.007G159200 Gossypium raimondii HOM05D007255 ORTHO05D009052 1.8e-72 276.6 236 58.5
arahy.Tifrunner.gnm1.ann1.TV22BE Arachis hypogaea HOM05D007255 ORTHO05D009052 3.2e-72 275.8 252 58.7
A06p39120 Brassica napus HOM05D007255 ORTHO05D009052 3.2e-72 275.8 212 66.5
Actinidia34549 Actinidia chinensis HOM05D007255 ORTHO05D009052 4.1e-72 275.4 239 61.1
Sp2g18890 Schrenkiella parvula HOM05D007255 ORTHO05D009052 4.1e-72 275.4 234 62.4
THA.LOC104818995 Tarenaya hassleriana HOM05D007255 ORTHO05D009052 5.4e-72 275.0 235 61.7
TPR.G15196 Trifolium pratense HOM05D007255 ORTHO05D009052 5.4e-72 275.0 240 60.8
C07p39220 Brassica napus HOM05D007255 ORTHO05D009052 1.2e-71 273.9 212 65.1
BolC7t44442H Brassica oleracea HOM05D007255 ORTHO05D009052 1.2e-71 273.9 212 65.1
Thhalv10004862m.g Eutrema salsugineum HOM05D007255 ORTHO05D009052 1.2e-71 273.9 234 62.4
Gohir.D11G148500 Gossypium hirsutum HOM05D007255 ORTHO05D009052 1.6e-71 273.5 236 58.1
Medtr8g011480 Medicago truncatula HOM05D007255 ORTHO05D009052 1.6e-71 273.5 237 60.8
Gohir.A11G142200 Gossypium hirsutum HOM05D007255 ORTHO05D009052 2.7e-71 272.7 236 57.6
Lj3g0001968 Lotus japonicus HOM05D007255 ORTHO05D009052 2.7e-71 272.7 252 59.1
Nn1g08274 Nelumbo nucifera HOM05D007255 ORTHO05D009052 4.6e-71 271.9 309 51.1
Sopen09g020080 Solanum pennellii HOM05D007255 ORTHO05D009052 1.3e-70 270.4 241 59.3
Atru.chr6.3551 Acer truncatum HOM05D007255 ORTHO05D009052 3.9e-70 268.9 219 63.5
MD10G1152600 Malus domestica HOM05D007255 ORTHO05D009052 6.6e-70 268.1 210 63.8
ECA248G0740 Erigeron canadensis HOM05D007255 ORTHO05D009052 8.6e-70 267.7 239 59.4
vmacro14695 Vaccinium macrocarpon HOM05D007255 ORTHO05D009052 1.9e-69 266.5 245 58.8
Phvul.010G031200 Phaseolus vulgaris HOM05D007255 ORTHO05D009052 2.5e-69 266.2 238 59.7
BcaC06g30785 Brassica carinata HOM05D007255 ORTHO05D009052 9.5e-69 264.2 198 66.7
Lsat_1_v5_gn_5_178401 Lactuca sativa HOM05D007255 ORTHO05D009052 1.2e-68 263.8 241 58.1
arahy.Tifrunner.gnm1.ann1.UDT0KZ Arachis hypogaea HOM05D007255 ORTHO05D009052 2.3e-67 259.6 211 63.5
MELO3C012737.2 Cucumis melo HOM05D007255 ORTHO05D009052 5.8e-66 255.0 241 58.1
Os02g0478500 Oryza sativa ssp. japonica HOM05D007255 ORTHO05D009052 9.8e-66 254.2 174 70.1
Sed0001908 Sechium edule HOM05D007255 ORTHO05D009052 6.4e-65 251.5 242 58.3
PSO170G5614 Papaver somniferum HOM05D007255 ORTHO05D009052 3.2e-64 249.2 266 51.1
ClCG09G008130 Citrullus lanatus HOM05D007352 ORTHO05D009052 9.2e-64 247.7 272 54.4
PSO357G0536 Papaver somniferum HOM05D007255 ORTHO05D009052 1.2e-63 247.3 267 51.7
Zm00001eb241080 Zea mays HOM05D007255 ORTHO05D009052 3.5e-63 245.7 175 69.7
Nn1g03664 Nelumbo nucifera HOM05D007255 ORTHO05D009052 6.0e-63 245.0 238 54.6
CsaV3_7G026920 Cucumis sativus L. HOM05D007255 ORTHO05D009052 1.1e-61 240.7 241 56.0
unitig_62.g23864 Utricularia gibba HOM05D007255 ORTHO05D009052 1.1e-59 234.2 212 58.5
AT5G48530 Arabidopsis thaliana HOM05D007255 ORTHO05D009052 1.8e-59 233.4 199 61.8
GSVIVG01006076001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.8e-59 233.4 161 72.0
unitig_64.g29772 Utricularia gibba HOM05D007255 ORTHO05D009052 2.0e-58 229.9 257 51.0
AUR62008128 Chenopodium quinoa HOM05D007255 ORTHO05D009052 1.7e-57 226.9 133 82.7
CSS0043687 Camellia sinensis var. sinensis HOM05D007255 ORTHO05D009052 3.2e-56 222.6 159 69.2
Aqoxy2G00044 Aquilegia oxysepala HOM05D007255 ORTHO05D009052 7.1e-56 221.5 176 64.2
Haze_03304 Corylus avellana HOM05D007255 ORTHO05D009052 2.1e-55 219.9 172 65.7
Peaxi162Scf00335g01514 Petunia axillaris HOM05D007255 ORTHO05D009052 2.7e-55 219.5 242 52.5
ATR0491G001 Amborella trichopoda HOM05D007255 ORTHO05D009052 1.7e-54 216.9 152 69.1
DCAR_018628 Daucus carota HOM05D007255 ORTHO05D009052 8.6e-54 214.5 168 62.5
Lj1A100G17 Lonicera japonica HOM05D007255 ORTHO05D009052 1.1e-53 214.2 182 61.5
HanXRQChr01g0025051 Helianthus annuus HOM05D007255 ORTHO05D009052 9.5e-53 211.1 178 64.0
Actinidia23788 Actinidia chinensis HOM05D007255 ORTHO05D009052 1.2e-44 184.1 197 52.3
HPP92_024260 Vanilla planifolia HOM05D007255 ORTHO05D009052 3.1e-35 152.9 127 59.1
Glyma.16G083400 Glycine max HOM05D007255 ORTHO05D009052 2.0e-34 150.2 112 67.0
VMungo0331G1225 Vigna mungo HOM05D007255 ORTHO05D009052 9.9e-26 121.3 126 54.0
HPP92_024228 Vanilla planifolia HOM05D007255 ORTHO05D009052 1.6e-23 114.0 97 60.8
VMungo0331G0526 Vigna mungo HOM05D007255 ORTHO05D009052 2.7e-23 113.2 105 58.1
CDE04G1852 Ceratophyllum demersum HOM05D007255 ORTHO05D009052 2.4e-19 100.1 77 64.9
Prupe.8G191300 Prunus persica HOM05D007255 ORTHO05D009052 3.4e-18 96.3 92 53.3
SEGI_09952 Sequoiadendron giganteum HOM05D007255 ORTHO05D009052 6.5e-17 92.0 55 76.4
VMungo0251G0654 Vigna mungo HOM05D007255 ORTHO05D009052 1.3e-14 84.3 80 57.5
GSVIVG01006250001 Vitis vinifera HOM05D007255 ORTHO05D009052 1.8e-14 84.0 81 54.3
Psat0s4060g0280 Pisum sativum HOM05D007255 ORTHO05D009052 7.7e-10 68.6 69 50.7


User provided reference genes

Program Settings