Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g051080 Amaranthus hybridus HOM05D001848 ORTHO05D001295 1.9e-98 362.5 174 100.0
EL10Ac5g10634 Beta vulgaris HOM05D001848 ORTHO05D001295 3.0e-32 142.5 168 44.0
AUR62028709 Chenopodium quinoa HOM05D001848 ORTHO05D001295 4.3e-18 95.5 93 52.7
AUR62008127 Chenopodium quinoa HOM05D001848 ORTHO05D001295 3.6e-17 92.4 93 50.5
AUR62028708 Chenopodium quinoa HOM05D001848 ORTHO05D001295 2.0e-15 86.7 88 47.7
Atru.chr3.1703 Acer truncatum HOM05D001848 ORTHO05D001295 1.2e-09 67.4 88 40.9
Atru.chr12.2390 Acer truncatum HOM05D001848 ORTHO05D001295 1.6e-09 67.0 88 39.8
RcHm_v2.0_Chr4g0409461 Rosa chinensis HOM05D001848 ORTHO05D001295 3.6e-09 65.9 75 42.7
arahy.Tifrunner.gnm1.ann1.FN75LP Arachis hypogaea HOM05D001848 ORTHO05D001295 4.7e-09 65.5 83 39.8
FvH4_4g11910 Fragaria vesca HOM05D001848 ORTHO05D001295 8.0e-09 64.7 99 36.4
FAN12G2359 Fragaria x ananassa HOM05D001848 ORTHO05D001295 8.0e-09 64.7 99 36.4
Rhsim05G0076600 Rhododendron simsii HOM05D001848 ORTHO05D001295 8.0e-09 64.7 73 45.2
Nn1g07985 Nelumbo nucifera HOM05D001848 ORTHO05D001295 1.1e-08 64.3 80 43.8
Nn1g08247 Nelumbo nucifera HOM05D001848 ORTHO05D001295 1.1e-08 64.3 80 43.8
AT5G48485 Arabidopsis thaliana HOM05D001848 ORTHO05D001295 1.8e-08 63.5 74 45.9
FAN07G0789 Fragaria x ananassa HOM05D001848 ORTHO05D001295 2.3e-08 63.2 75 42.7
FAN17G1858 Fragaria x ananassa HOM05D001848 ORTHO05D001295 2.3e-08 63.2 75 42.7
FAN22G1308 Fragaria x ananassa HOM05D001848 ORTHO05D001295 2.3e-08 63.2 75 42.7
TAR636G3109 Trochodendron aralioides HOM05D001848 ORTHO05D001295 4.0e-08 62.4 72 44.4
GSVIVG01031677001 Vitis vinifera HOM05D001848 ORTHO05D001295 4.0e-08 62.4 74 43.2
CANSAT11G0405 Cannabis sativa HOM05D001848 ORTHO05D001295 5.2e-08 62.0 75 41.3
Cc04_g01540 Coffea canephora HOM05D001848 ORTHO05D001295 5.2e-08 62.0 88 42.0
DCAR_018625 Daucus carota HOM05D001848 ORTHO05D001295 5.2e-08 62.0 74 43.2
Rhsim12G0036400 Rhododendron simsii HOM05D001848 ORTHO05D001295 5.2e-08 62.0 101 39.6
Prupe.1G179900 Prunus persica HOM05D001848 ORTHO05D001295 8.9e-08 61.2 81 39.5
Carub.0008s0807 Capsella rubella HOM05D001848 ORTHO05D001295 1.2e-07 60.8 73 43.8
PSO017G5175 Papaver somniferum HOM05D001848 ORTHO05D001295 1.2e-07 60.8 102 41.2
AL8G21340 Arabidopsis lyrata HOM05D001848 ORTHO05D001295 2.0e-07 60.1 74 43.2
Glyma.10G297600 Glycine max HOM05D001848 ORTHO05D001295 2.6e-07 59.7 88 39.8
Lj1g0024594 Lotus japonicus HOM05D001848 ORTHO05D001295 2.6e-07 59.7 74 41.9
Lj3g0013447 Lotus japonicus HOM05D001848 ORTHO05D001295 2.6e-07 59.7 92 39.1
Manes.15G148400 Manihot esculenta HOM05D001848 ORTHO05D001295 2.6e-07 59.7 67 44.8
Nn7g37661 Nelumbo nucifera HOM05D001848 ORTHO05D001295 2.6e-07 59.7 78 42.3
Phvul.011G047400 Phaseolus vulgaris HOM05D001848 ORTHO05D001295 3.4e-07 59.3 91 37.4
Gohir.D01G071850 Gossypium hirsutum HOM05D001848 ORTHO05D001295 4.4e-07 58.9 90 37.8
Gorai.002G094700 Gossypium raimondii HOM05D001848 ORTHO05D001295 4.4e-07 58.9 90 37.8
Sed0004601 Sechium edule HOM05D001848 ORTHO05D001295 4.4e-07 58.9 72 44.4
Thhalv10005129m.g Eutrema salsugineum HOM05D001848 ORTHO05D001295 5.8e-07 58.5 72 41.7
DCAR_021418 Daucus carota HOM05D001848 ORTHO05D001295 7.5e-07 58.2 75 37.3
ClCG07G016680 Citrullus lanatus HOM05D001848 ORTHO05D001295 9.8e-07 57.8 75 42.7
Ciclev10029642m.g Citrus clementina HOM05D001848 ORTHO05D001295 1.3e-06 57.4 74 39.2
DCAR_021416 Daucus carota HOM05D001848 ORTHO05D001295 1.7e-06 57.0 75 38.7
Manes.13G054400 Manihot esculenta HOM05D001848 ORTHO05D001295 2.2e-06 56.6 75 41.3
VMungo1127G0744 Vigna mungo HOM05D001848 ORTHO05D001295 2.2e-06 56.6 89 37.1
arahy.Tifrunner.gnm1.ann1.0X4CPT Arachis hypogaea HOM05D001848 ORTHO05D001295 4.9e-06 55.5 75 40.0
Haze_11072 Corylus avellana HOM05D001848 ORTHO05D001295 4.9e-06 55.5 92 35.9
AL8G21350 Arabidopsis lyrata HOM05D001848 ORTHO05D001295 6.4e-06 55.1 72 43.1
CSS0044367 Camellia sinensis var. sinensis HOM05D001848 ORTHO05D001295 8.3e-06 54.7 112 36.6
SalBow3G1514 Salvia bowleyana HOM05D001848 ORTHO05D001295 8.3e-06 54.7 73 42.5


User provided reference genes

Program Settings