Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050990 Amaranthus hybridus HOM05D005211 ORTHO05D006148 6.1e-68 261.2 148 100.0
AUR62028696 Chenopodium quinoa HOM05D005211 ORTHO05D006148 1.9e-24 116.7 152 52.6
EL10Ac5g10623 Beta vulgaris HOM05D005211 ORTHO05D006148 1.0e-22 110.9 149 53.0
Sc17g0001650 Simmondsia chinensis HOM05D005211 ORTHO05D006148 8.7e-14 81.3 110 49.1
Cc01_g16110 Coffea canephora HOM05D005211 ORTHO05D006148 1.5e-13 80.5 112 49.1
QL93p0263_0042 Quercus lobata HOM05D005211 ORTHO05D006148 8.1e-12 74.7 114 43.9
TAR636G0814 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.1e-11 74.3 119 41.2
CiPaw.13G055500 Carya illinoinensis HOM05D005211 ORTHO05D006148 1.4e-11 73.9 120 44.2
COL.COLO4_26568 Corchorus olitorius HOM05D005211 ORTHO05D006148 1.4e-11 73.9 126 42.1
Lj1P101T27 Lonicera japonica HOM05D005211 ORTHO05D006148 1.4e-11 73.9 120 41.7
CiPaw.14G044000 Carya illinoinensis HOM05D005211 ORTHO05D006148 4.0e-11 72.4 128 39.1
Manes.13G054600 Manihot esculenta HOM05D005211 ORTHO05D006148 9.0e-11 71.2 135 39.3
QL09p046680 Quercus lobata HOM05D005211 ORTHO05D006148 9.0e-11 71.2 115 44.3
PGSC0003DMG400005560 Solanum tuberosum HOM05D005211 ORTHO05D006148 9.0e-11 71.2 101 45.5
Gohir.D07G203100 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.2e-10 70.9 154 37.0
RcHm_v2.0_Chr6g0282781 Rosa chinensis HOM05D005211 ORTHO05D006148 1.2e-10 70.9 126 38.9
Gohir.A07G196700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 2.6e-10 69.7 154 36.4
CSS0012153 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.4e-10 69.3 119 40.3
CSS0028586 Camellia sinensis var. sinensis HOM05D005211 ORTHO05D006148 3.4e-10 69.3 119 40.3
Gorai.001G228500 Gossypium raimondii HOM05D005211 ORTHO05D006148 3.4e-10 69.3 154 36.4
Duzib133G1390 Durio zibethinus HOM05D005211 ORTHO05D006148 4.5e-10 68.9 137 40.9
Manes.11G114000 Manihot esculenta HOM05D005211 ORTHO05D006148 5.8e-10 68.6 113 42.5
Nn1g08305 Nelumbo nucifera HOM05D005211 ORTHO05D006148 5.8e-10 68.6 141 35.5
Prupe.8G190000 Prunus persica HOM05D005211 ORTHO05D006148 7.6e-10 68.2 121 42.1
Oeu057829.1 Olea europaea HOM05D005211 ORTHO05D006148 9.9e-10 67.8 113 40.7
RcHm_v2.0_Chr4g0409781 Rosa chinensis HOM05D005211 ORTHO05D006148 9.9e-10 67.8 120 37.5
MBI07_g35368_MAGBIO Magnolia biondii HOM05D005211 ORTHO05D006148 1.7e-09 67.0 108 41.7
Rhsim13G0052900 Rhododendron simsii HOM05D005211 ORTHO05D006148 1.7e-09 67.0 122 39.3
Dinv28809 Davidia involucrata HOM05D005211 ORTHO05D006148 2.2e-09 66.6 124 38.7
Duzib138G1875 Durio zibethinus HOM05D005211 ORTHO05D006148 2.2e-09 66.6 136 37.5
FAN22G0070 Fragaria x ananassa HOM05D005211 ORTHO05D006148 2.2e-09 66.6 119 35.3
Oeu003658.1 Olea europaea HOM05D005211 ORTHO05D006148 2.2e-09 66.6 123 37.4
vmacro02818 Vaccinium macrocarpon HOM05D005211 ORTHO05D006148 2.2e-09 66.6 135 40.0
Actinidia23357 Actinidia chinensis HOM05D005211 ORTHO05D006148 2.9e-09 66.2 111 37.8
CiPaw.01G108100 Carya illinoinensis HOM05D005211 ORTHO05D006148 2.9e-09 66.2 121 39.7
FvH4_2g17750 Fragaria vesca HOM05D005211 ORTHO05D006148 4.9e-09 65.5 148 31.8
FAN24G3081 Fragaria x ananassa HOM05D005211 ORTHO05D006148 4.9e-09 65.5 148 31.8
Gohir.A11G142700 Gossypium hirsutum HOM05D005211 ORTHO05D006148 4.9e-09 65.5 146 37.0
FAN27G1389 Fragaria x ananassa HOM05D005211 ORTHO05D006148 6.4e-09 65.1 153 32.0
Cpa.g.sc8.70 Carica papaya HOM05D005211 ORTHO05D006148 8.4e-09 64.7 130 40.0
CDE07G0882 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 8.4e-09 64.7 119 36.1
FAN15G0641 Fragaria x ananassa HOM05D005211 ORTHO05D006148 8.4e-09 64.7 147 32.0
Potri.002G232500 Populus trichocarpa HOM05D005211 ORTHO05D006148 8.4e-09 64.7 121 38.0
TWI36G1602 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 8.4e-09 64.7 115 38.3
FAN07G0144 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.4e-08 63.9 119 34.5
TAR365G0119 Trochodendron aralioides HOM05D005211 ORTHO05D006148 1.4e-08 63.9 119 38.7
CDE04G3135 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 1.9e-08 63.5 119 37.0
QL10p006175 Quercus lobata HOM05D000022 ORTHO05D006148 1.9e-08 63.5 67 49.3
Sabra14G0113200 Salix brachista HOM05D005211 ORTHO05D006148 1.9e-08 63.5 122 35.2
QL10p044103 Quercus lobata HOM05D005211 ORTHO05D006148 2.4e-08 63.2 117 39.3
Duzib211G0461 Durio zibethinus HOM05D005211 ORTHO05D006148 3.2e-08 62.8 137 35.8
Eucgr.H00442 Eucalyptus grandis HOM05D005211 ORTHO05D006148 3.2e-08 62.8 121 37.2
Lj2P1117T13 Lonicera japonica HOM05D005211 ORTHO05D006148 3.2e-08 62.8 126 38.9
Aqoxy2G03955 Aquilegia oxysepala HOM05D005211 ORTHO05D006148 4.2e-08 62.4 122 40.2
TWI18G0981 Tripterygium wilfordii HOM05D005211 ORTHO05D006148 4.2e-08 62.4 116 37.9
Gorai.007G159800 Gossypium raimondii HOM05D005211 ORTHO05D006148 5.5e-08 62.0 143 36.4
MD10G1151700 Malus domestica HOM05D005211 ORTHO05D006148 5.5e-08 62.0 118 35.6
Thecc.01G210700 Theobroma cacao HOM05D005211 ORTHO05D006148 5.5e-08 62.0 132 38.6
Cfa008551 Carpinus fangiana HOM05D005211 ORTHO05D006148 7.1e-08 61.6 123 41.5
Solyc12g042010.1 Solanum lycopersicum HOM05D005211 ORTHO05D006148 7.1e-08 61.6 119 37.0
FAN12G3367 Fragaria x ananassa HOM05D005211 ORTHO05D006148 9.3e-08 61.2 119 33.6
FAN12G0052 Fragaria x ananassa HOM05D005211 ORTHO05D006148 1.2e-07 60.8 119 33.6
Gohir.D11G149000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.2e-07 60.8 143 35.0
MSTRG.18497 Avicennia marina HOM05D005211 ORTHO05D006148 1.6e-07 60.5 77 42.9
Migut.N00665 Erythranthe guttata HOM05D005211 ORTHO05D006148 1.6e-07 60.5 113 36.3
MD05G1158800 Malus domestica HOM05D005211 ORTHO05D006148 1.6e-07 60.5 119 35.3
Potri.014G149800 Populus trichocarpa HOM05D005211 ORTHO05D006148 1.6e-07 60.5 124 33.9
Prupe.1G178500 Prunus persica HOM05D005211 ORTHO05D006148 2.7e-07 59.7 124 37.1
CDE02G4090 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 4.6e-07 58.9 139 35.3
CDE09G1368 Ceratophyllum demersum HOM05D005211 ORTHO05D006148 7.9e-07 58.2 139 34.5
DCAR_004769 Daucus carota HOM05D005211 ORTHO05D006148 7.9e-07 58.2 120 35.0
TAR633G2277 Trochodendron aralioides HOM05D005211 ORTHO05D006148 7.9e-07 58.2 115 40.9
Eucgr.H00724 Eucalyptus grandis HOM05D005211 ORTHO05D006148 1.0e-06 57.8 150 34.7
Gohir.A07G159000 Gossypium hirsutum HOM05D005211 ORTHO05D006148 1.3e-06 57.4 69 47.8
MD05G1158700 Malus domestica HOM05D005211 ORTHO05D006148 1.3e-06 57.4 124 36.3
Gorai.N002800 Gossypium raimondii HOM05D005211 ORTHO05D006148 2.3e-06 56.6 69 47.8
PGR083G0764 Punica granatum HOM05D005211 ORTHO05D006148 2.3e-06 56.6 139 35.3
MELO3C026134.2 Cucumis melo HOM05D005211 ORTHO05D006148 6.7e-06 55.1 112 39.3
Prupe.8G190100 Prunus persica HOM05D005211 ORTHO05D006148 6.7e-06 55.1 122 35.2
Sabra02G0177300 Salix brachista HOM05D005211 ORTHO05D006148 6.7e-06 55.1 121 33.9
Aa31LG1G24830 Aethionema arabicum HOM05D005211 ORTHO05D006148 8.7e-06 54.7 98 39.8


User provided reference genes

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