Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050810 Amaranthus hybridus HOM05D007112 ORTHO05D008930 3.6e-131 471.5 222 100.0
AUR62008068 Chenopodium quinoa HOM05D007112 ORTHO05D008930 7.2e-87 324.3 229 67.7
AUR62028645 Chenopodium quinoa HOM05D007112 ORTHO05D008930 7.4e-84 314.3 229 66.8
Hund02806 Selenicereus undatus HOM05D007112 ORTHO05D008930 4.5e-73 278.5 229 59.8
Atru.chr6.3529 Acer truncatum HOM05D007112 ORTHO05D008930 2.5e-55 219.5 226 48.2
TAR362G0557 Trochodendron aralioides HOM05D007112 ORTHO05D008930 5.2e-53 211.8 227 47.1
GSVIVG01001529001 Vitis vinifera HOM05D007112 ORTHO05D008930 6.8e-53 211.5 229 48.9
Ciclev10016325m.g Citrus clementina HOM05D007112 ORTHO05D008930 5.7e-52 208.4 227 46.3
Rhsim01G0247600 Rhododendron simsii HOM05D007112 ORTHO05D008930 1.7e-51 206.8 223 47.5
Hma1.2p1_1043F.1_g251280 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 4.9e-51 205.3 237 45.6
Carub.0003s0707 Capsella rubella HOM05D007112 ORTHO05D008930 1.1e-50 204.1 221 48.4
Duzib133G1446 Durio zibethinus HOM05D007112 ORTHO05D008930 3.2e-50 202.6 229 46.7
COL.COLO4_34270 Corchorus olitorius HOM05D007112 ORTHO05D008930 1.6e-49 200.3 229 46.7
THA.LOC104819012 Tarenaya hassleriana HOM05D007112 ORTHO05D008930 1.6e-49 200.3 224 45.1
Thecc.01G207600 Theobroma cacao HOM05D007112 ORTHO05D008930 2.7e-49 199.5 230 44.8
RcHm_v2.0_Chr6g0282211 Rosa chinensis HOM05D007112 ORTHO05D008930 5.9e-49 198.4 226 47.8
Cfa017735 Carpinus fangiana HOM05D007112 ORTHO05D008930 7.8e-49 198.0 226 44.7
Sc24g0003360 Simmondsia chinensis HOM05D007112 ORTHO05D008930 1.7e-48 196.8 227 46.7
TWI36G0064 Tripterygium wilfordii HOM05D007112 ORTHO05D008930 3.0e-48 196.1 229 45.9
LjContig00389g0002281 Lotus japonicus HOM05D007112 ORTHO05D008930 5.0e-48 195.3 221 44.8
arahy.Tifrunner.gnm1.ann1.T2R7SH Arachis hypogaea HOM05D007112 ORTHO05D008930 1.9e-47 193.4 223 44.8
ClCG09G008370 Citrullus lanatus HOM05D007112 ORTHO05D008930 1.9e-47 193.4 227 45.8
Actinidia23803 Actinidia chinensis HOM05D007112 ORTHO05D008930 2.5e-47 193.0 230 44.3
Sabra14G0134200 Salix brachista HOM05D007112 ORTHO05D008930 2.5e-47 193.0 224 44.2
Sp3g06430 Schrenkiella parvula HOM05D007112 ORTHO05D008930 3.3e-47 192.6 219 47.5
AT3G07525 Arabidopsis thaliana HOM05D007112 ORTHO05D008930 5.6e-47 191.8 219 44.7
Nitab4.5_0000038g0350 Nicotiana tabacum HOM05D007112 ORTHO05D008930 5.6e-47 191.8 226 43.4
BraA05t22800Z Brassica rapa HOM05D007112 ORTHO05D008930 9.5e-47 191.0 219 46.1
Thhalv10022158m.g Eutrema salsugineum HOM05D007112 ORTHO05D008930 9.5e-47 191.0 220 46.4
FvH4_2g17490 Fragaria vesca HOM05D007112 ORTHO05D008930 9.5e-47 191.0 226 46.0
TPR.G17379 Trifolium pratense HOM05D007112 ORTHO05D008930 9.5e-47 191.0 231 44.6
FAN15G3611 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.1e-46 189.9 226 46.5
Nitab4.5_0010469g0020 Nicotiana tabacum HOM05D007112 ORTHO05D008930 2.1e-46 189.9 233 40.8
MD05G1153700 Malus domestica HOM05D007112 ORTHO05D008930 3.6e-46 189.1 229 44.1
BcaC05g29544 Brassica carinata HOM05D007112 ORTHO05D008930 6.2e-46 188.3 220 46.4
BolC5t34634H Brassica oleracea HOM05D007112 ORTHO05D008930 1.0e-45 187.6 219 45.7
Lj2A1111T23 Lonicera japonica HOM05D007112 ORTHO05D008930 1.8e-45 186.8 230 41.3
Aa31LG5G18060 Aethionema arabicum HOM05D007112 ORTHO05D008930 2.3e-45 186.4 227 43.6
vmacro14688 Vaccinium macrocarpon HOM05D007112 ORTHO05D008930 3.1e-45 186.0 205 48.3
A05p40690 Brassica napus HOM05D007112 ORTHO05D008930 6.8e-45 184.9 219 46.1
Sed0011312 Sechium edule HOM05D007112 ORTHO05D008930 8.9e-45 184.5 238 44.1
CARHR082180 Cardamine hirsuta HOM05D007112 ORTHO05D008930 1.2e-44 184.1 220 45.0
CsaV3_7G026720 Cucumis sativus L. HOM05D007112 ORTHO05D008930 1.5e-44 183.7 226 44.2
Oeu013523.1 Olea europaea HOM05D007112 ORTHO05D008930 1.5e-44 183.7 226 44.2
Gorai.001G227200 Gossypium raimondii HOM05D007112 ORTHO05D008930 2.6e-44 183.0 231 42.4
Psat4g208280 Pisum sativum HOM05D007112 ORTHO05D008930 3.4e-44 182.6 218 42.2
Glyma.03G097000 Glycine max HOM05D007112 ORTHO05D008930 4.4e-44 182.2 226 42.9
Gohir.A07G195600 Gossypium hirsutum HOM05D007112 ORTHO05D008930 7.5e-44 181.4 231 42.0
PSO675G4719 Papaver somniferum HOM05D007112 ORTHO05D008930 7.5e-44 181.4 253 43.5
Sopen09g015950 Solanum pennellii HOM05D007112 ORTHO05D008930 7.5e-44 181.4 230 39.6
PGSC0003DMG400021909 Solanum tuberosum HOM05D007112 ORTHO05D008930 7.5e-44 181.4 228 40.4
VMungo0331G1777 Vigna mungo HOM05D007112 ORTHO05D008930 7.5e-44 181.4 222 44.1
Gohir.D07G202200 Gossypium hirsutum HOM05D007112 ORTHO05D008930 9.8e-44 181.0 231 42.4
CSS0005940 Camellia sinensis var. sinensis HOM05D007112 ORTHO05D008930 1.7e-43 180.3 228 43.9
Glyma.07G124300 Glycine max HOM05D007112 ORTHO05D008930 1.7e-43 180.3 224 42.4
Phvul.010G036300 Phaseolus vulgaris HOM05D007112 ORTHO05D008930 2.2e-43 179.9 224 42.4
Prupe.8G187100 Prunus persica HOM05D007112 ORTHO05D008930 2.2e-43 179.9 229 44.1
Solyc09g047840.3 Solanum lycopersicum HOM05D007112 ORTHO05D008930 2.2e-43 179.9 227 39.6
Aqoxy5G04050 Aquilegia oxysepala HOM05D007112 ORTHO05D008930 2.9e-43 179.5 225 43.6
HanXRQChr08g0231791 Helianthus annuus HOM05D007112 ORTHO05D008930 3.7e-43 179.1 229 43.2
Lalb_Chr07g0194661 Lupinus albus HOM05D007112 ORTHO05D008930 8.3e-43 177.9 230 43.5
PSO732G0401 Papaver somniferum HOM05D007112 ORTHO05D008930 8.3e-43 177.9 250 43.6
arahy.Tifrunner.gnm1.ann1.X2Q8CL Arachis hypogaea HOM05D007112 ORTHO05D008930 1.1e-42 177.6 210 44.3
Peaxi162Scf02239g00022 Petunia axillaris HOM05D007112 ORTHO05D008930 1.1e-42 177.6 226 40.7
Migut.D00774 Erythranthe guttata HOM05D007112 ORTHO05D008930 5.4e-42 175.3 232 40.1
Dinv28792 Davidia involucrata HOM05D007112 ORTHO05D008930 7.0e-42 174.9 224 42.4
PGR044G1116 Punica granatum HOM05D007112 ORTHO05D008930 7.0e-42 174.9 220 43.2
C05p59800 Brassica napus HOM05D007112 ORTHO05D008930 1.2e-41 174.1 219 45.2
SHI30551 Sapria himalayana HOM05D007112 ORTHO05D008930 6.0e-41 171.8 227 39.6
Eucgr.K02360 Eucalyptus grandis HOM05D007112 ORTHO05D008930 7.8e-41 171.4 221 39.8
Medtr8g010140 Medicago truncatula HOM05D007112 ORTHO05D008930 1.3e-40 170.6 224 43.8
CANSAT01G1474 Cannabis sativa HOM05D007112 ORTHO05D008930 1.7e-40 170.2 238 42.4
QL05p089159 Quercus lobata HOM05D007112 ORTHO05D008930 1.7e-40 170.2 219 40.6
FAN24G0137 Fragaria x ananassa HOM05D007112 ORTHO05D008930 2.3e-40 169.9 228 42.5
SalBow3G4154 Salvia bowleyana HOM05D007112 ORTHO05D008930 5.0e-40 168.7 227 39.6
ECA247G2139 Erigeron canadensis HOM05D000092 ORTHO05D008930 2.5e-39 166.4 231 40.7
Ca_23159_v3 Cicer arietinum L. HOM05D007112 ORTHO05D008930 4.3e-39 165.6 223 41.3
MSTRG.18505 Avicennia marina HOM05D007112 ORTHO05D008930 2.1e-38 163.3 230 39.6
ATR0752G208 Amborella trichopoda HOM05D007112 ORTHO05D008930 1.1e-37 161.0 225 41.8
CiPaw.14G038400 Carya illinoinensis HOM05D007112 ORTHO05D008930 4.0e-37 159.1 192 45.3
Manes.13G056200 Manihot esculenta HOM05D007112 ORTHO05D008930 2.6e-36 156.4 166 48.2
HPP92_001291 Vanilla planifolia HOM05D007112 ORTHO05D008930 4.4e-36 155.6 223 39.9
Cc01_g15870 Coffea canephora HOM05D007112 ORTHO05D008930 7.5e-36 154.8 233 38.2
Nn7g37436 Nelumbo nucifera HOM05D007112 ORTHO05D008930 7.5e-36 154.8 161 47.2
Lsat_1_v5_gn_9_16901 Lactuca sativa HOM05D007112 ORTHO05D008930 2.2e-35 153.3 223 39.0
unitig_60.g25572 Utricularia gibba HOM05D007112 ORTHO05D008930 1.4e-34 150.6 222 39.2
Hma1.2p1_1043F.1_g251290 Hydrangea macrophylla HOM05D007112 ORTHO05D008930 7.1e-34 148.3 138 52.9
Zm00001eb425740 Zea mays HOM05D007112 ORTHO05D008930 1.6e-33 147.1 225 36.4
MBI10_g35388_MAGBIO Magnolia biondii HOM05D007112 ORTHO05D008930 1.0e-32 144.4 265 34.7
CDE05G1497 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 1.9e-31 140.2 169 44.4
MELO3C021125.2 Cucumis melo HOM05D007112 ORTHO05D008930 1.2e-30 137.5 157 47.1
Os04g0497350 Oryza sativa ssp. japonica HOM05D007112 ORTHO05D008930 2.1e-30 136.7 220 37.3
DCAR_018609 Daucus carota HOM05D007112 ORTHO05D008930 1.4e-26 124.0 166 45.2
AagrBONN_evm.TU.Sc2ySwM_344.2017 Anthoceros agrestis HOM05D007112 ORTHO05D008930 5.4e-26 122.1 192 34.9
Pp3c26_2050 Physcomitrium patens HOM05D007112 ORTHO05D008930 1.3e-24 117.5 193 36.3
CAN.G50.11 Capsicum annuum HOM05D007112 ORTHO05D008930 1.7e-24 117.1 102 52.0
EL10Ac5g10586 Beta vulgaris HOM05D007112 ORTHO05D008930 4.7e-22 109.0 96 58.3
HanXRQChr03g0082541 Helianthus annuus HOM05D007112 ORTHO05D008930 1.2e-20 104.4 97 53.6
Cpa.g.sc8.40 Carica papaya HOM05D007112 ORTHO05D008930 2.0e-20 103.6 116 44.8
EL10Ac5g10588 Beta vulgaris HOM05D007112 ORTHO05D008930 1.3e-19 100.9 66 68.2
Haze_03375 Corylus avellana HOM05D007112 ORTHO05D008930 3.8e-19 99.4 151 36.4
Mapoly0002s0314 Marchantia polymorpha HOM05D007112 ORTHO05D008930 4.3e-15 85.9 185 30.3
SMO141G0021 Selaginella moellendorffii HOM05D007112 ORTHO05D008930 4.8e-14 82.4 213 26.8
MD10G1148000 Malus domestica HOM05D007112 ORTHO05D008930 4.0e-13 79.3 118 36.4
Haze_03371 Corylus avellana HOM05D007112 ORTHO05D008930 1.1e-10 71.2 102 40.2
Nn7g37443 Nelumbo nucifera HOM05D007112 ORTHO05D008930 9.3e-10 68.2 68 45.6
Haze_03374 Corylus avellana HOM05D000072 ORTHO05D000026 7.9e-09 65.1 103 40.8
CDE05G2169 Ceratophyllum demersum HOM05D007112 ORTHO05D008930 2.8e-06 56.6 124 34.7


User provided reference genes

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