Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Ah.11g050710 Amaranthus hybridus HOM05D006455 ORTHO05D008098 2.3e-260 901.7 463 100.0
AUR62028628 Chenopodium quinoa HOM05D006455 ORTHO05D008098 2.4e-185 652.5 512 66.4
AUR62008053 Chenopodium quinoa HOM05D006455 ORTHO05D008098 3.4e-179 632.1 512 63.5
Hund02815 Selenicereus undatus HOM05D006455 ORTHO05D008098 3.9e-167 592.0 516 60.1
EL10Ac5g10573 Beta vulgaris HOM05D006455 ORTHO05D008098 4.9e-138 495.4 400 66.8
Sc05g0001610 Simmondsia chinensis HOM05D006455 ORTHO05D008098 1.1e-134 484.2 513 51.1
Actinidia23129 Actinidia chinensis HOM05D006455 ORTHO05D008098 4.4e-131 472.2 447 56.8
TAR362G0985 Trochodendron aralioides HOM05D006455 ORTHO05D008098 1.7e-130 470.3 509 50.1
Haze_08072 Corylus avellana HOM05D006455 ORTHO05D008098 4.6e-128 462.2 513 49.3
CiPaw.12G071600 Carya illinoinensis HOM05D006455 ORTHO05D008098 1.7e-127 460.3 512 48.4
Cfa012584 Carpinus fangiana HOM05D006455 ORTHO05D008098 1.1e-126 457.6 513 48.7
Atru.chr6.3495 Acer truncatum HOM05D006455 ORTHO05D008098 1.2e-123 447.6 511 50.3
GSVIVG01001915001 Vitis vinifera HOM05D006455 ORTHO05D008098 9.9e-123 444.5 513 47.2
Nn1g09557 Nelumbo nucifera HOM05D006455 ORTHO05D008098 2.1e-120 436.8 514 46.7
Cc04_g10320 Coffea canephora HOM05D006455 ORTHO05D008098 4.6e-120 435.6 509 44.4
Thecc.01G205700 Theobroma cacao HOM05D006455 ORTHO05D008098 6.7e-119 431.8 514 47.1
Gohir.A11G144500 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.9e-118 430.3 514 45.7
Manes.12G057904 Manihot esculenta HOM05D006455 ORTHO05D008098 4.3e-118 429.1 517 47.2
Manes.12G057502 Manihot esculenta HOM05D006455 ORTHO05D008098 7.4e-118 428.3 517 47.0
CSS0002127 Camellia sinensis var. sinensis HOM05D006455 ORTHO05D008098 2.1e-117 426.8 437 49.4
Gorai.007G161800 Gossypium raimondii HOM05D006455 ORTHO05D008098 2.8e-117 426.4 516 45.7
TWI75G0274 Tripterygium wilfordii HOM05D006455 ORTHO05D008098 1.4e-116 424.1 513 44.4
Aqoxy2G04132 Aquilegia oxysepala HOM05D006455 ORTHO05D008098 9.0e-116 421.4 509 47.7
Migut.D00764 Erythranthe guttata HOM05D006455 ORTHO05D008098 2.6e-115 419.9 512 45.5
Manes.12G057700 Manihot esculenta HOM05D006455 ORTHO05D008098 2.6e-115 419.9 517 47.0
Manes.12G057901 Manihot esculenta HOM05D006455 ORTHO05D008098 2.6e-115 419.9 517 47.0
MSTRG.18514 Avicennia marina HOM05D006455 ORTHO05D008098 3.4e-115 419.5 520 46.5
Eucgr.K02350 Eucalyptus grandis HOM05D006455 ORTHO05D008098 3.4e-115 419.5 516 47.9
Rhsim13G0055500 Rhododendron simsii HOM05D006455 ORTHO05D008098 4.5e-115 419.1 480 48.3
CsaV3_3G001300 Cucumis sativus L. HOM05D006455 ORTHO05D008098 1.0e-114 417.9 516 42.8
Nitab4.5_0006514g0010 Nicotiana tabacum HOM05D006455 ORTHO05D008098 1.0e-114 417.9 509 46.0
Ciclev10014895m.g Citrus clementina HOM05D006455 ORTHO05D008098 4.9e-114 415.6 517 47.6
Nitab4.5_0000077g0170 Nicotiana tabacum HOM05D006455 ORTHO05D008098 5.5e-113 412.1 508 44.5
Lj1A106T21 Lonicera japonica HOM05D006455 ORTHO05D008098 3.5e-112 409.5 498 48.2
Prupe.2G049600 Prunus persica HOM05D006455 ORTHO05D008098 4.6e-112 409.1 513 43.7
RcHm_v2.0_Chr7g0228451 Rosa chinensis HOM05D006455 ORTHO05D008098 1.3e-111 407.5 509 46.2
SGA_v2.0_scaffold158G37512 Striga asiatica HOM05D006455 ORTHO05D008098 5.7e-110 402.1 531 42.9
MD02G1270700 Malus domestica HOM05D006455 ORTHO05D008098 1.3e-109 401.0 508 42.1
Sopen09g013040 Solanum pennellii HOM05D006455 ORTHO05D008098 1.6e-109 400.6 513 43.1
CANSAT21G2240 Cannabis sativa HOM05D006455 ORTHO05D008098 3.7e-109 399.4 511 43.8
QL12p000818 Quercus lobata HOM05D006455 ORTHO05D008098 3.1e-108 396.4 508 43.5
FvH4_5g32260 Fragaria vesca HOM05D006455 ORTHO05D008098 1.5e-107 394.0 514 43.4
ClCG10G001240 Citrullus lanatus HOM05D006455 ORTHO05D008098 4.5e-107 392.5 493 45.4
FAN18G4165 Fragaria x ananassa HOM05D006455 ORTHO05D008098 4.5e-107 392.5 514 43.2
COL.COLO4_29922 Corchorus olitorius HOM05D006455 ORTHO05D008098 1.3e-106 391.0 524 45.0
BcaC06g30808 Brassica carinata HOM05D006455 ORTHO05D008098 2.2e-106 390.2 511 44.2
FAN13G0315 Fragaria x ananassa HOM05D006455 ORTHO05D008098 3.8e-106 389.4 514 42.0
C07p39110 Brassica napus HOM05D006455 ORTHO05D008098 6.5e-106 388.7 512 44.3
ECA248G0009 Erigeron canadensis HOM05D006455 ORTHO05D008098 1.1e-105 387.9 513 44.4
BcaC06g30805 Brassica carinata HOM05D006455 ORTHO05D008098 2.5e-105 386.7 510 43.7
Sp2g18700 Schrenkiella parvula HOM05D006455 ORTHO05D008098 1.2e-104 384.4 510 41.8
BolC7t44431H Brassica oleracea HOM05D006455 ORTHO05D008098 2.7e-104 383.3 513 43.1
MELO3C013818.2 Cucumis melo HOM05D006455 ORTHO05D008098 6.1e-104 382.1 493 44.2
HanXRQChr01g0014041 Helianthus annuus HOM05D006455 ORTHO05D008098 1.0e-103 381.3 514 44.0
A06p39230 Brassica napus HOM05D006455 ORTHO05D008098 1.8e-103 380.6 510 42.9
BraA06t26837Z Brassica rapa HOM05D006455 ORTHO05D008098 3.0e-103 379.8 512 43.6
Carub.0008s0792 Capsella rubella HOM05D006455 ORTHO05D008098 5.1e-103 379.0 512 43.0
AT5G48340 Arabidopsis thaliana HOM05D006455 ORTHO05D008098 6.7e-103 378.6 509 43.2
Cpa.g.sc8.27 Carica papaya HOM05D006455 ORTHO05D008098 8.7e-103 378.3 496 45.2
Sed0000077 Sechium edule HOM05D006455 ORTHO05D008098 1.1e-102 377.9 520 42.1
HanXRQChr01g0013871 Helianthus annuus HOM05D006455 ORTHO05D008098 1.9e-102 377.1 514 44.0
Lalb_Chr16g0391751 Lupinus albus HOM05D006455 ORTHO05D008098 5.7e-102 375.6 515 42.5
unitig_0.g222 Utricularia gibba HOM05D006455 ORTHO05D008098 5.7e-102 375.6 518 39.2
Lsat_1_v5_gn_5_176300 Lactuca sativa HOM05D006455 ORTHO05D008098 7.4e-102 375.2 513 41.9
Peaxi162Scf00315g00814 Petunia axillaris HOM05D006455 ORTHO05D008098 7.4e-102 375.2 490 43.3
PSO210G0904 Papaver somniferum HOM05D006455 ORTHO05D008098 2.2e-101 373.6 513 45.2
PSO210G7796 Papaver somniferum HOM05D006455 ORTHO05D008098 2.2e-101 373.6 514 44.9
Potri.014G174300 Populus trichocarpa HOM05D006455 ORTHO05D008098 2.2e-101 373.6 517 42.9
PGR044G2428 Punica granatum HOM05D006455 ORTHO05D008098 4.8e-101 372.5 510 41.6
Glyma.16G105200 Glycine max HOM05D006455 ORTHO05D008098 3.1e-100 369.8 494 43.1
Psat4g108080 Pisum sativum HOM05D006455 ORTHO05D008098 1.2e-99 367.9 508 40.0
CARHR183890 Cardamine hirsuta HOM05D006455 ORTHO05D008098 2.6e-99 366.7 509 42.0
AL8G21110 Arabidopsis lyrata HOM05D006455 ORTHO05D008098 7.7e-99 365.2 510 42.5
TPR.G31161 Trifolium pratense HOM05D006455 ORTHO05D008098 7.7e-99 365.2 504 42.5
FAN08G0013 Fragaria x ananassa HOM05D006455 ORTHO05D004776 1.0e-98 364.8 494 42.9
Ca_30349_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 3.2e-97 359.8 516 42.2
arahy.Tifrunner.gnm1.ann1.E0JCGG Arachis hypogaea HOM05D006455 ORTHO05D008098 4.2e-97 359.4 492 41.7
arahy.Tifrunner.gnm1.ann1.U8H9H1 Arachis hypogaea HOM05D006455 ORTHO05D008098 4.2e-97 359.4 492 41.7
Solyc09g020150.4 Solanum lycopersicum HOM05D006455 ORTHO05D008098 1.2e-96 357.8 493 42.2
ATR0743G062 Amborella trichopoda HOM05D006455 ORTHO05D008098 1.6e-96 357.5 526 41.4
Lj4g0021895 Lotus japonicus HOM05D006455 ORTHO05D008098 1.6e-96 357.5 509 42.2
VMungo0251G3325 Vigna mungo HOM05D006455 ORTHO05D008098 1.8e-95 354.0 509 43.2
Aa31LG5G9090 Aethionema arabicum HOM05D006455 ORTHO05D008098 3.9e-95 352.8 508 40.9
Sabra14G0133600 Salix brachista HOM05D006455 ORTHO05D008098 6.7e-95 352.1 518 41.7
vmacro02844 Vaccinium macrocarpon HOM05D006455 ORTHO05D008098 6.7e-95 352.1 496 42.9
Thhalv10003907m.g Eutrema salsugineum HOM05D006455 ORTHO05D008098 4.4e-94 349.4 491 41.1
Os01g0897100 Oryza sativa ssp. japonica HOM05D006455 ORTHO05D008098 9.7e-94 348.2 508 40.2
Phvul.003G279900 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 1.7e-93 347.4 505 42.8
Dinv07639 Davidia involucrata HOM05D006455 ORTHO05D008098 3.4e-91 339.7 334 50.9
Ca_22482_v3 Cicer arietinum L. HOM05D006455 ORTHO05D008098 1.7e-90 337.4 494 42.1
Medtr8g071270 Medicago truncatula HOM05D006455 ORTHO05D008098 1.8e-87 327.4 494 39.1
MBI07_g34151_MAGBIO Magnolia biondii HOM05D006455 ORTHO05D008098 3.3e-86 323.2 463 45.6
Manes.12G057900 Manihot esculenta HOM05D006455 ORTHO05D008098 1.4e-84 317.8 494 37.7
SHI10210 Sapria himalayana HOM05D006455 ORTHO05D008098 1.2e-83 314.7 518 40.2
Manes.12G058105 Manihot esculenta HOM05D006455 ORTHO05D008098 6.5e-82 308.9 494 37.4
Gohir.D11G150900 Gossypium hirsutum HOM05D006455 ORTHO05D008098 1.5e-81 307.8 393 44.8
Zm00001eb144730 Zea mays HOM05D006455 ORTHO05D008098 9.4e-81 305.1 496 39.3
DCAR_000439 Daucus carota HOM05D006455 ORTHO05D008098 1.0e-79 301.6 348 45.1
SEGI_16096 Sequoiadendron giganteum HOM05D006455 ORTHO05D008098 3.7e-77 293.1 520 37.3
HPP92_001271 Vanilla planifolia HOM05D006455 ORTHO05D008098 6.3e-69 265.8 335 42.4
HPP92_001254 Vanilla planifolia HOM05D006455 ORTHO05D008098 2.3e-63 247.3 213 54.5
Manes.12G058904 Manihot esculenta HOM05D006455 ORTHO05D008098 2.2e-53 214.2 272 43.0
CDE05G1197 Ceratophyllum demersum HOM05D006455 ORTHO05D008098 2.7e-51 207.2 182 55.5
PGSC0003DMG402020303 Solanum tuberosum HOM05D006455 ORTHO05D008098 1.2e-46 191.8 347 37.5
EL10Ac5g10574 Beta vulgaris HOM05D006455 ORTHO05D008098 6.4e-45 186.0 115 77.4
Pp3c10_13370 Physcomitrium patens HOM05D006455 ORTHO05D008098 1.1e-44 185.3 526 29.7
Manes.12G057503 Manihot esculenta HOM05D006455 ORTHO05D008098 9.2e-44 182.2 128 67.2
Manes.12G057505 Manihot esculenta HOM05D006455 ORTHO05D008098 9.2e-44 182.2 128 67.2
Oeu030353.1 Olea europaea HOM05D006455 ORTHO05D008098 4.6e-43 179.9 327 38.8
SMO200G0077 Selaginella moellendorffii HOM05D006455 ORTHO05D008098 8.1e-40 169.1 496 28.8
Mapoly0109s0061 Marchantia polymorpha HOM05D006455 ORTHO05D008098 3.4e-38 163.7 215 39.5
Manes.12G057504 Manihot esculenta HOM05D006455 ORTHO05D008098 6.4e-29 132.9 195 47.2
AagrBONN_evm.TU.Sc2ySwM_228.5553 Anthoceros agrestis HOM05D006455 ORTHO05D008098 7.1e-28 129.4 225 34.2
Zm00001eb128100 Zea mays HOM05D006455 ORTHO05D008098 1.7e-26 124.8 142 43.0
CBR_g48756 Chara braunii HOM05D006455 ORTHO05D000497 3.9e-26 123.6 126 42.9
Zm00001eb274660 Zea mays HOM05D006455 ORTHO05D008098 5.1e-26 123.2 142 42.3
PGSC0003DMG400020304 Solanum tuberosum HOM05D006455 ORTHO05D008098 4.7e-24 116.7 115 45.2
Oeu030354.1 Olea europaea HOM05D006455 ORTHO05D008098 4.0e-23 113.6 116 46.6
Manes.12G060108 Manihot esculenta HOM05D006455 ORTHO05D008098 7.6e-22 109.4 173 46.8
Phvul.003G297266 Phaseolus vulgaris HOM05D006455 ORTHO05D008098 9.6e-17 92.4 122 38.5
Cre03.g197250 Chlamydomonas reinhardtii HOM05D006455 ORTHO05D008098 2.2e-13 81.3 115 37.4
Oeu003682.1 Olea europaea HOM05D006455 ORTHO05D008098 5.6e-09 66.6 116 31.9
Zm00001eb128090 Zea mays HOM05D006455 ORTHO05D008098 4.8e-08 63.5 110 33.6
Actinidia33399 Actinidia chinensis HOM05D006455 ORTHO05D008098 9.0e-07 59.3 47 57.4


User provided reference genes

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